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comparison nist_wrapper.xml @ 2:f6da901ffff8

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jinja solution
author pieter.lukasse@wur.nl
date Thu, 22 Jan 2015 16:55:19 +0100
parents cce6989ed423
children 910ebd2a6826
comparison
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1:964ec10d568c 2:f6da901ffff8
3 This part is a WORKAROUND for the wine X11 dependency, allowing it to run headless : 3 This part is a WORKAROUND for the wine X11 dependency, allowing it to run headless :
4 -> install Xvfb and enable it on a port, say 995: 4 -> install Xvfb and enable it on a port, say 995:
5 -> make sure this gets executed: export DISPLAY=:995; 5 -> make sure this gets executed: export DISPLAY=:995;
6 --> 6 -->
7 <description> Runs NIST's msseach program to match spectra against metabolite libraries</description> 7 <description> Runs NIST's msseach program to match spectra against metabolite libraries</description>
8
9 <requirements>
10 <requirement name="package" version="0.2">nist_wrapper_venv</requirement>
11 </requirements>
12
8 <command interpreter="export DISPLAY=:0; python"> 13 <command interpreter="export DISPLAY=:0; python">
9 nist_wrapper.py 14 nist_wrapper.py
10 "~/.wine/drive_c/NIST" 15 "~/.wine/drive_c/NIST"
11 $nistIniFile 16 $nistIniFile
12 $spectraFile 17 $spectraFile