Mercurial > repos > pieterlukasse > prims_metabolomics

annotate select_on_rank.xml @ 50:93102202ab79

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Added more options and better documentation. Added MsClust support for parsing XCMS alignment results. Improved output reports for XCMS wrappers. New tools.
author pieter.lukasse@wur.nl
date Wed, 10 Dec 2014 22:04:33 +0100
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children
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1 <tool id="filter_on_rank" name="RIQC-Filter on rank" version="1.0.2">
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2 <description>Filter on the Rank field in the RankFilter output file</description>
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3 <command interpreter="python">select_on_rank.py $input $output "$rank"</command>
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4 <inputs>
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5 <param format="tabular" name="input" type="data" label="Source file (RankFilter ouptut)"/>
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6 <param format="tabular" help="Filter on (keep different values separate with a comma)" value ="1,2"
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7 name="rank" type="text" label="Select Ranks to keep"/>
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8 </inputs>
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9 <outputs>
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10 <data format="tabular" label="${tool.name} on ${on_string} selected ${rank}" name="output" />
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11 </outputs>
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12 <help>
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13 This tool removes all entries with non selected rank values from the input file (supported input file is a RankFilter output file).
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14 </help>
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15 </tool>