Mercurial > repos > pieterlukasse > prims_metabolomics
comparison msclust.xml @ 33:42880675f824
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author | pieter.lukasse@wur.nl |
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date | Tue, 16 Sep 2014 21:02:23 +0200 |
parents | 746cb34f10ed |
children | 0ff22eec3e4b |
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32:746cb34f10ed | 33:42880675f824 |
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5 java -jar -Xdebug -Xrunjdwp:transport=dt_socket,address=D0100564.wurnet.nl:8000 | 5 java -jar -Xdebug -Xrunjdwp:transport=dt_socket,address=D0100564.wurnet.nl:8000 |
6 ////////////////////////// | 6 ////////////////////////// |
7 | 7 |
8 TODO in command below: add conditionals according to options of using or NOT the tolerances/thresholds from previous steps | 8 TODO in command below: add conditionals according to options of using or NOT the tolerances/thresholds from previous steps |
9 --> | 9 --> |
10 <command interpreter="java -jar -Xmx32g "> | 10 <command interpreter="java -jar -Xmx58g "> |
11 MsClust.jar | 11 MsClust.jar |
12 -peaksFileName $inputPeaks | 12 -peaksFileName $inputPeaks |
13 -dataType $dataType | 13 -dataType $dataType |
14 -imputationMethod $imputationMethod.type | 14 -imputationMethod $imputationMethod.type |
15 #if $imputationMethod.type == "valueRange" | 15 #if $imputationMethod.type == "valueRange" |