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New tool to Query multiple public repositories for elemental compositions from accurate mass values detected by high-resolution mass spectrometers
author pieter.lukasse@wur.nl
date Thu, 03 Apr 2014 16:50:45 +0200
parents 9d5f4f5f764b
children
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<tool id="NDIStext2tabular" name="NIST_UTIL- NIST text to tabular format" version="1.0.2">
  <description>Convert NIST text to tabular format</description>
  <command interpreter="python">rankfilter_GCMS/pdftotabular.py $input $output $output_err</command>
  <inputs>
    <param format="pdf" name="input" type="data" label="NIST identifications report (PDF)"/>
  </inputs>
  <outputs>
    <data format="tabular" label="${tool.name} output on ${on_string}"  name="output" />
    <data format="tabular" label="${tool.name} error log"  name="output_err" />
  </outputs>
  <help>
    This tool converts NIST identification report output (PDF) to a tabular format needed for further use with the RIQC tools.
  </help>
</tool>