Mercurial > repos > pieterlukasse > prims_metabolomics2

annotate metaMS/next.r @ 15:05ff1c55db84

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fix for rankfilter, removed pfd read functional
author linda.bakker@wur.nl <linda.bakker@wur.nl>
date Fri, 20 Mar 2015 17:11:04 +0100
parents 4393f982d18f
children
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1 # next script, useful for plotting the CAMERA groups pseudo-spectra:
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2 plotPsSpectrum( LC$xset,320,maxlabel=10)
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3 320 is group id
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4 plotEICs( LC$xset,35,maxlabel=5)
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7 could use this for the items identified by "annotate" step.
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pieter.lukasse@wur.nl
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8 could also integrate this to getEIC tool (add option to give group list instead of m/z list)...but then rt and other options
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pieter.lukasse@wur.nl
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9 are also not so relevant...maybe a separate tool is more clear