Mercurial > repos > pieterlukasse > prims_metabolomics2

annotate metaMS/next.r @ 25:9f03c8587d6b draft default tip

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MetExp msclust upload format changed from tabular to csv
author linda-bakker
date Fri, 24 Aug 2018 09:56:05 -0400
parents 4393f982d18f
children
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pieter.lukasse@wur.nl
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1 # next script, useful for plotting the CAMERA groups pseudo-spectra:
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2 plotPsSpectrum( LC$xset,320,maxlabel=10)
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3 320 is group id
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4 plotEICs( LC$xset,35,maxlabel=5)
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5
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6
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7 could use this for the items identified by "annotate" step.
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pieter.lukasse@wur.nl
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8 could also integrate this to getEIC tool (add option to give group list instead of m/z list)...but then rt and other options
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pieter.lukasse@wur.nl
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9 are also not so relevant...maybe a separate tool is more clear