Mercurial > repos > pieterlukasse > prims_metabolomics2

diff metaMS/next.r @ 6:4393f982d18f

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reorganized sources
author pieter.lukasse@wur.nl
date Thu, 19 Mar 2015 12:22:23 +0100
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/metaMS/next.r	Thu Mar 19 12:22:23 2015 +0100
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+# next script, useful for plotting the CAMERA groups pseudo-spectra:
+plotPsSpectrum( LC$xset,320,maxlabel=10) 
+320 is group id
+plotEICs( LC$xset,35,maxlabel=5) 
+
+
+could use this for the items identified by "annotate" step.
+could also integrate this to getEIC tool (add option to give group list instead of m/z list)...but then rt and other options
+   are also not so relevant...maybe a separate tool is more clear
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