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1 PRIMS-proteomics toolset & Galaxy wrappers
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2 ==========================================
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3
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4 Proteomics module of Plant Research International's Mass Spectrometry (PRIMS) toolsuite.
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5 This toolset consists of custom tools to enable data processing and
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6 protein inference for labeled and label-free Mass Spectrometry proteomics data.
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7
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8 Can be used in combination with PRIMS-MASSCOMB (prims_masscomb package) and
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9 with PRIMV-visualization (primv_visualization package).
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10
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11 Copyright 2010-2013 by Pieter Lukasse, Plant Research International (PRI),
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12 Wageningen, The Netherlands. All rights reserved. See the license text below.
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13
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14 Galaxy wrappers and installation are available from the Galaxy Tool Shed at:
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15 http://toolshed.g2.bx.psu.edu/view/pieterlukasse/prims_proteomics
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16
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17 History
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18 =======
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19
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20 ============== ======================================================================
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21 Date Changes
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22 -------------- ----------------------------------------------------------------------
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23 January 2014 * first release via Tool Shed
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24 November 2013 * multiple tools used internally at PRI
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25 end 2011 * first tool
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26 ============== ======================================================================
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27
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28 Tool Versioning
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29 ===============
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30
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31 PRIMS tools will have versions of the form X.Y.Z. Versions
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32 differing only after the second decimal should be completely
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33 compatible with each other. Breaking changes should result in an
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34 increment of the number before and/or after the first decimal. All
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35 tools of version less than 1.0.0 should be considered beta.
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36
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37
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38 Bug Reports & other questions
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39 =============================
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40
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41 For the time being issues can be reported via the contact form at:
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42 http://www.wageningenur.nl/en/Persons/PNJ-Pieter-Lukasse.htm
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43
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44 Developers, Contributions & Collaborations
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45 ==========================================
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46
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47 If you wish to join forces and collaborate on some of the
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48 tools do not hesitate to contact Pieter Lukasse via the contact form above.
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49
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50
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51 License (Apache, Version 2.0)
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52 =============================
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53
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54 Copyright 2013 Pieter Lukasse, Plant Research International (PRI).
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55
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56 Licensed under the Apache License, Version 2.0 (the "License");
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57 you may not use this software except in compliance with the License.
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58 You may obtain a copy of the License at
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59
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60 http://www.apache.org/licenses/LICENSE-2.0
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61
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62 Unless required by applicable law or agreed to in writing, software
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63 distributed under the License is distributed on an "AS IS" BASIS,
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64 WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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65 See the License for the specific language governing permissions and
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66 limitations under the License.
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67 |
