Mercurial > repos > pieterlukasse > prims_proteomics

comparison sedmat.xml @ 13:08e93cd411b9

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SMALL FIX
author pieter.lukasse@wur.nl
date Fri, 21 Mar 2014 13:19:45 +0100
parents d1edc7971d48
children 40ec8770780d
comparison
equal deleted inserted replaced
12:a4d11b23377b 13:08e93cd411b9
9 -pl $inputMS 9 -pl $inputMS
10 -plInputFormat apml 10 -plInputFormat apml
11 -ppids $fileType.inputFormatType.ppidsFile 11 -ppids $fileType.inputFormatType.ppidsFile
12 -ppidsFileGrouping $fileType.type 12 -ppidsFileGrouping $fileType.type
13 -ppidsInputFormat $fileType.inputFormatType.ppidsInputFormat 13 -ppidsInputFormat $fileType.inputFormatType.ppidsInputFormat
14 -ppidsFileDescription $fileType.inputFormatType.ppidsFile.name 14 -ppidsFileDescription "$fileType.inputFormatType.ppidsFile.name"
15 #if $fileType.inputFormatType.ppidsInputFormat == "mzid" 15 #if $fileType.inputFormatType.ppidsInputFormat == "mzid"
16 -spectraDataFile $fileType.inputFormatType.spectraDataFile 16 -spectraDataFile $fileType.inputFormatType.spectraDataFile
17 #end if 17 #end if
18 -out $outputData 18 -out $outputData
19 -outUnmatchedMS2 $outUnmatchedMS2 19 -outUnmatchedMS2 $outUnmatchedMS2