Mercurial > repos > pieterlukasse > prims_proteomics

comparison napq.xml @ 27:34c4e7e0f23b

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type fix
author pieter.lukasse@wur.nl
date Fri, 30 Jan 2015 14:37:28 +0100
parents 17acaf080e76
children 6107b74eeb11
comparison
equal deleted inserted replaced
26:17acaf080e76 27:34c4e7e0f23b
82 </conditional> 82 </conditional>
83 83
84 </inputs> 84 </inputs>
85 <configfiles> 85 <configfiles>
86 <configfile name="identificationsConfigFile">## start comment 86 <configfile name="identificationsConfigFile">## start comment
87 apml 87 ## iterate over the selected files and store their names in the config file
88 #for $i, $s in enumerate( $identificationFileList )
89 ${s.identificationsFile}
90 ## also print out the datatype in the next line, based on previously configured datatype
91 #if isinstance( $s.identificationsFile.datatype, $__app__.datatypes_registry.get_datatype_by_extension('apml').__class__):
92 apml
93 #else:
94 mzid
95 #end if
96 #end for
88 ## end comment</configfile> 97 ## end comment</configfile>
89 </configfiles> 98 </configfiles>
90 <outputs> 99 <outputs>
91 <data name="outputApml" format="apml" label="${tool.name} on ${on_string}: peptide quantifications (APML)"/> 100 <data name="outputApml" format="apml" label="${tool.name} on ${on_string}: peptide quantifications (APML)"/>
92 <data name="outputTsv" format="tabular" label="${tool.name} on ${on_string}: peptide quantifications (TSV)"/> 101 <data name="outputTsv" format="tabular" label="${tool.name} on ${on_string}: peptide quantifications (TSV)"/>