Mercurial > repos > pieterlukasse > prims_proteomics

comparison napq.xml @ 19:d31c6978d9d0

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fixes for NapQ
author pieter.lukasse@wur.nl
date Mon, 26 Jan 2015 06:24:15 +0100
parents 40ec8770780d
children 46f568202d46
comparison
equal deleted inserted replaced
18:ad911e9aaf33 19:d31c6978d9d0
25 </repeat> 25 </repeat>
26 26
27 <param name="namingConventionCodesForSamples" type="text" size="100" value="" 27 <param name="namingConventionCodesForSamples" type="text" size="100" value=""
28 label="Part of run/file name that identifies the sample" 28 label="Part of run/file name that identifies the sample"
29 help="Add the CSV list of codes that occur in the file names 29 help="Add the CSV list of codes that occur in the file names
30 and that stand for a sample code. E.g. '_S1,_S2,_S3,etc.' "/> <!-- could do regular expressions as well but this would be hard for biologists, e.g. _F\d\b --> 30 and that stand for a sample code. E.g. '_S1,_S2,_S3,etc.' "> <!-- could do regular expressions as well but this would be hard for biologists, e.g. _F\d\b -->
31 31 <sanitizer>
32 <!-- adding more characters to the set of "valid" ones: -->
33 <valid>
34 <add preset="string.printable"/>
35 <add value="#"/>
36 <add value="@"/>
37 <add value="$"/>
38 <add value="%"/>
39 <add value="&"/>
40 <add value="*"/>
41 <add value="["/>
42 <add value="]"/>
43 <add value="|"/>
44 <add value="{"/>
45 <add value="}"/>
46 </valid>
47 </sanitizer>
48 </param>
32 49
33 <conditional name="is2D_LC_MS"> 50 <conditional name="is2D_LC_MS">
34 <param name="fractions" type="boolean" truevalue="Yes" falsevalue="No" checked="false" 51 <param name="fractions" type="boolean" truevalue="Yes" falsevalue="No" checked="false"
35 label="Data is from 2D LC-MS" 52 label="Data is from 2D LC-MS"
36 help="Data acquisition was done in multiple fractions."/> 53 help="Data acquisition was done in multiple fractions."/>
37 <when value="Yes"> 54 <when value="Yes">
38 <param name="namingConventionCodesForFractions" type="text" size="100" value="" 55 <param name="namingConventionCodesForFractions" type="text" size="100" value=""
39 label="Part of run/file name that identifies the 2D LC-MS fraction" 56 label="Part of run/file name that identifies the 2D LC-MS fraction"
40 help="Add the CSV list of codes that occur in the file names 57 help="Add the CSV list of codes that occur in the file names
41 and that stand for a fraction code. E.g. '_F1,_F2,_F3,etc.' Use this to avoid 58 and that stand for a fraction code. E.g. '_F1,_F2,_F3,etc.' Use this to avoid
42 that each (fraction) file is seen as a separate run."/> <!-- could do regular expressions as well but this would be hard for biologists, e.g. _F\d\b --> 59 that each (fraction) file is seen as a separate run."> <!-- could do regular expressions as well but this would be hard for biologists, e.g. _F\d\b -->
60 <sanitizer>
61 <!-- adding more characters to the set of "valid" ones: -->
62 <valid>
63 <add preset="string.printable"/>
64 <add value="#"/>
65 <add value="@"/>
66 <add value="$"/>
67 <add value="%"/>
68 <add value="&"/>
69 <add value="*"/>
70 <add value="["/>
71 <add value="]"/>
72 <add value="|"/>
73 <add value="{"/>
74 <add value="}"/>
75 </valid>
76 </sanitizer>
77 </param>
78
43 </when> 79 </when>
44 <when value="No"> 80 <when value="No">
45 </when> 81 </when>
46 </conditional> 82 </conditional>
47 83