Mercurial > repos > pieterlukasse > prims_proteomics
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author | pieter.lukasse@wur.nl |
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date | Wed, 08 Jan 2014 11:39:16 +0100 |
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children | 40ec8770780d |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README.rst Wed Jan 08 11:39:16 2014 +0100 @@ -0,0 +1,67 @@ +PRIMS-proteomics toolset & Galaxy wrappers +========================================== + +Proteomics module of Plant Research International's Mass Spectrometry (PRIMS) toolsuite. +This toolset consists of custom tools to enable data processing and +protein inference for labeled and label-free Mass Spectrometry proteomics data. + +Can be used in combination with PRIMS-MASSCOMB (prims_masscomb package) and +with PRIMV-visualization (primv_visualization package). + +Copyright 2010-2013 by Pieter Lukasse, Plant Research International (PRI), +Wageningen, The Netherlands. All rights reserved. See the license text below. + +Galaxy wrappers and installation are available from the Galaxy Tool Shed at: +http://toolshed.g2.bx.psu.edu/view/pieterlukasse/prims_proteomics + +History +======= + +============== ====================================================================== +Date Changes +-------------- ---------------------------------------------------------------------- +January 2014 * first release via Tool Shed +November 2013 * multiple tools used internally at PRI +end 2011 * first tool +============== ====================================================================== + +Tool Versioning +=============== + +PRIMS tools will have versions of the form X.Y.Z. Versions +differing only after the second decimal should be completely +compatible with each other. Breaking changes should result in an +increment of the number before and/or after the first decimal. All +tools of version less than 1.0.0 should be considered beta. + + +Bug Reports & other questions +============================= + +For the time being issues can be reported via the contact form at: +http://www.wageningenur.nl/en/Persons/PNJ-Pieter-Lukasse.htm + +Developers, Contributions & Collaborations +========================================== + +If you wish to join forces and collaborate on some of the +tools do not hesitate to contact Pieter Lukasse via the contact form above. + + +License (Apache, Version 2.0) +============================= + +Copyright 2013 Pieter Lukasse, Plant Research International (PRI). + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this software except in compliance with the License. +You may obtain a copy of the License at + +http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. + \ No newline at end of file