# HG changeset patch
# User pieter.lukasse@wur.nl
# Date 1406906557 -7200
# Node ID ad911e9aaf336e276feee0965818377c3a1cc6da
# Parent  40ec8770780de51552858042ff704e3ef381a662
small fix in msfilt report output

diff -r 40ec8770780d -r ad911e9aaf33 MsFilt.jar
Binary file MsFilt.jar has changed
diff -r 40ec8770780d -r ad911e9aaf33 msfilt.xml
--- a/msfilt.xml	Mon Apr 14 17:11:33 2014 +0200
+++ b/msfilt.xml	Fri Aug 01 17:22:37 2014 +0200
@@ -221,6 +221,17 @@
 The output report shows some plots that visualize the filtering done. This can help in fine-tuning the right filtering
 criteria.
 
+
+*Filter criteria examples for filtering identifications*
+
+================================== ===========================================================================
+Data type                          Example filter criteria
+---------------------------------- ---------------------------------------------------------------------------
+QExactive/ProteomeDiscoverer data  * (qmBSCR<-1.0) or (!isNaN(smPercoProb) and 18-20*smPercoProb>qmBSCR)
+X!Tandem identifications data      * (qmDMP <-0.5 and qmBSCR<-0.5) or (!isNaN(smXTD) and smXTD>0.01)
+================================== ===========================================================================
+
+
 -----
 
 **Output details**