Mercurial > repos > pieterlukasse > prims_proteomics
changeset 16:d56c18ed0f77
fix in comment and in configuration
| author | pieter.lukasse@wur.nl |
|---|---|
| date | Fri, 28 Mar 2014 14:43:46 +0100 |
| parents | 33962926e260 |
| children | 40ec8770780d |
| files | napq.xml |
| diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/napq.xml Fri Mar 21 14:28:27 2014 +0100 +++ b/napq.xml Fri Mar 28 14:43:46 2014 +0100 @@ -20,7 +20,7 @@ <inputs> - <repeat name="identificationFileList" title="Peptide identification files" help="Full set of MS/MS peptide identification files, including peptides that could not be quantified."> + <repeat name="identificationFileList" title="Peptide identification files" help="Set of MS/MS peptide identification files that have some form of quantification data coupled to it (e.g. MSE identifications&intensity)."> <param name="identificationsFile" type="data" format="apml,mzidentml,prims.fileset.zip" label="Identifications file (APML or MZIDENTML or MZIDENTML fileSet)" /> </repeat> @@ -50,7 +50,7 @@ <configfile name="identificationsConfigFile">## start comment ## iterate over the selected files and store their names in the config file #for $i, $s in enumerate( $identificationFileList ) - ${s.identificationsFile}|${s.spectraFile} + ${s.identificationsFile} ## also print out the datatype in the next line, based on previously configured datatype #if isinstance( $s.identificationsFile.datatype, $__app__.datatypes_registry.get_datatype_by_extension('apml').__class__): apml