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1 PRIMS-workflows for Galaxy
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2 ==========================
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3
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4 Workflows module of Plant Research International's Mass Spectrometry (PRIMS)
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5 solution using a combination of tools from different packages, including:
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6
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7 * PRIMS-proteomics (prims_proteomics)
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8 * PRIMS-MASSCOMB (prims_masscomb)
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9 * PRIMV-visualization (primv_visualization)
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10
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11 Copyright 2010-2013 by Pieter Lukasse, Plant Research International (PRI),
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12 Wageningen, The Netherlands. All rights reserved. See the license text below.
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13
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14 Galaxy installation is available from the Galaxy Tool Shed at:
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15 http://toolshed.g2.bx.psu.edu/view/pieterlukasse/prims_workflows
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16
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17 NB: after installing the prims_workflows Tool Shed repository, you should still
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18 import the desired workflows from the installed repository to make them active in
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19 your local Galaxy environment.
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20 See https://wiki.galaxyproject.org/ToolShedWorkflowSharing#Finding_workflows_in_tool_shed_repositories
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21 for more details.
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22
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23 History
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24 =======
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25
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26 ============== ======================================================================
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27 Date Changes
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28 -------------- ----------------------------------------------------------------------
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29 January 2014 * first release via Tool Shed
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30
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31 ============== ======================================================================
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32
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33 Tool Versioning
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34 ===============
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35
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36 PRI tools used in the workflows will have versions of the form X.Y.Z.
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37 Versions differing only after the second decimal should be completely
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38 compatible with each other. Breaking changes should result in an
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39 increment of the number before and/or after the first decimal. All
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40 tools of version less than 1.0.0 should be considered beta.
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41
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42
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43 Bug Reports & other questions
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44 =============================
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45
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46 For the time being issues can be reported via the contact form at:
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47 http://www.wageningenur.nl/en/Persons/PNJ-Pieter-Lukasse.htm
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48
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49 Developers, Contributions & Collaborations
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50 ==========================================
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51
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52 If you wish to join forces and collaborate on some of the
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53 tools do not hesitate to contact Pieter Lukasse via the contact form above.
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54
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55
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56 License (Apache, Version 2.0)
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57 =============================
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58
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59 Copyright 2013 Pieter Lukasse, Plant Research International (PRI).
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60
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61 Licensed under the Apache License, Version 2.0 (the "License");
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62 you may not use this software except in compliance with the License.
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63 You may obtain a copy of the License at
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64
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65 http://www.apache.org/licenses/LICENSE-2.0
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66
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67 Unless required by applicable law or agreed to in writing, software
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68 distributed under the License is distributed on an "AS IS" BASIS,
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69 WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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70 See the License for the specific language governing permissions and
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71 limitations under the License.
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72 |
