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author | pieter.lukasse@wur.nl |
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date | Wed, 08 Jan 2014 11:44:26 +0100 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README.rst Wed Jan 08 11:44:26 2014 +0100 @@ -0,0 +1,72 @@ +PRIMS-workflows for Galaxy +========================== + +Workflows module of Plant Research International's Mass Spectrometry (PRIMS) +solution using a combination of tools from different packages, including: + +* PRIMS-proteomics (prims_proteomics) +* PRIMS-MASSCOMB (prims_masscomb) +* PRIMV-visualization (primv_visualization) + +Copyright 2010-2013 by Pieter Lukasse, Plant Research International (PRI), +Wageningen, The Netherlands. All rights reserved. See the license text below. + +Galaxy installation is available from the Galaxy Tool Shed at: +http://toolshed.g2.bx.psu.edu/view/pieterlukasse/prims_workflows + +NB: after installing the prims_workflows Tool Shed repository, you should still +import the desired workflows from the installed repository to make them active in +your local Galaxy environment. +See https://wiki.galaxyproject.org/ToolShedWorkflowSharing#Finding_workflows_in_tool_shed_repositories +for more details. + +History +======= + +============== ====================================================================== +Date Changes +-------------- ---------------------------------------------------------------------- +January 2014 * first release via Tool Shed + +============== ====================================================================== + +Tool Versioning +=============== + +PRI tools used in the workflows will have versions of the form X.Y.Z. +Versions differing only after the second decimal should be completely +compatible with each other. Breaking changes should result in an +increment of the number before and/or after the first decimal. All +tools of version less than 1.0.0 should be considered beta. + + +Bug Reports & other questions +============================= + +For the time being issues can be reported via the contact form at: +http://www.wageningenur.nl/en/Persons/PNJ-Pieter-Lukasse.htm + +Developers, Contributions & Collaborations +========================================== + +If you wish to join forces and collaborate on some of the +tools do not hesitate to contact Pieter Lukasse via the contact form above. + + +License (Apache, Version 2.0) +============================= + +Copyright 2013 Pieter Lukasse, Plant Research International (PRI). + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this software except in compliance with the License. +You may obtain a copy of the License at + +http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. + \ No newline at end of file