Mercurial > repos > pjbriggs > amplicon_analysis_pipeline

comparison tool_dependencies.xml @ 4:86a12d75ebe4 draft default tip

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planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 7be61b7ed35ca3deaad68d2eae384c8cd365bcb8
author pjbriggs
date Fri, 20 Dec 2019 06:59:49 -0500
parents 3ab198df8f3f
children
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3:3ab198df8f3f 4:86a12d75ebe4
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="amplicon_analysis_pipeline" version="1.2.3"> 3 <package name="amplicon_analysis_pipeline" version="1.3.6">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions>
6 <action type="download_file">https://raw.githubusercontent.com/pjbriggs/Amplicon_analysis-galaxy/master/install_amplicon_analysis.sh</action> 6 <action type="download_file">https://raw.githubusercontent.com/pjbriggs/Amplicon_analysis-galaxy/master/install_amplicon_analysis-1.3.6.sh</action>
7 <action type="shell_command"> 7 <action type="shell_command">
8 sh ./install_amplicon_analysis.sh $INSTALL_DIR 8 sh ./install_amplicon_analysis-1.3.6.sh $INSTALL_DIR
9 </action> 9 </action>
10 <action type="set_environment"> 10 <action type="set_environment">
11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/Amplicon_analysis-1.2.3/bin</environment_variable> 11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/Amplicon_analysis-1.3.6/bin</environment_variable>
12 </action> 12 </action>
13 </actions> 13 </actions>
14 </install> 14 </install>
15 </package> 15 </package>
16 </tool_dependency> 16 </tool_dependency>