annotate test-data/illuminaPE_r1.fq @ 3:e1a14ed7a9d6 draft

Updated to version 0.02.04.4 (new pal_filter script)
author pjbriggs
date Wed, 24 Feb 2016 08:25:17 -0500
parents b6ccc7dd7b02
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
2
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
1 @ILLUMINA-545855:49:FC61RLR:2:1:10979:1695 1:N:0:TCCTGA
0
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
2 TACTGTTTAGAATAGACTGTTCTCCCACTATATTTTGCATTGGTGCATACTCAGCTTTAGTAATAAGTGTGATTCTGGTAGAGAGAGAGAGAGATACCAACCTCTTCTTCCCACTA
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
3 +
2
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
4 IIIIIHIIIGHHIIDGHIIIIIIHIIIIIIIIIIIIHGIIIIHGIIIIHHHIHHGHIIHHEHHIGHGDHDHHHGGHEGAHGDGEHEGEGBGCEDBDDGEEFDEECGDEGDEDEDE8
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
5 @ILLUMINA-545855:49:FC61RLR:2:1:17449:1584 1:N:0:TCCTGA
0
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
6 TCGTAGCATGTGTATGCTTTGGGGTTTCATGCTGTTGATTCATAACTGCTGCTGGCTGTAGACTGAACCTTCTGGGTAGGAGGAATATGCTTAGACAAGCACACCAGTCAGCCCGA
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
7 +
2
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
8 IIIIIIIIIIHIIIIIGIIIIFIIIIIIGIIIIGBIHBIIIHIIIIHIIHHHEHFHHFEFHEFEICHEGGDBDBDD.=??<A@???BBBBDBBB?@CEEE@BBB@B<72?;@####
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
9 @ILLUMINA-545855:49:FC61RLR:2:1:19063:1614 1:N:0:TCCTGA
0
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
10 TATATATATATATACACATATATATATATATTTTTTACATTATTTCACTTCGCCCAAACTAGAGAGTCTAACAAAGTACAACCCAGCATATTAAAGTTCATCTCAGTTTTGTTCTG
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
11 +
2
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
12 IIIIIIIGIEIIIIGIIIHHIHIGIGIIIIIHIIIIHGBEIIIIHIFHHIHFIIIIFHFIHIIHFF>EEEBDGDD;BD8DDBBDDBGHGHHHHEFE=DBCDEEEBEBEGHGAFH@E
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
13 @ILLUMINA-545855:49:FC61RLR:2:1:1978:1220 1:N:0:TCCTGA
0
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
14 TCATAAGAATGAGCAGTAAACAAAGGCAAAGGGGAGATAACACACACACACAAAATAAAAAAACATCAATTTCTAATACACGCCTTTATTATAAAGAAATAAATCACTGAAAAACA
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
15 +
2
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
16 DDDDDBDBDDB7?BBB5BB>1?<?88>DDD?4(6367;>?2<164=;>8<0DDD>>A6A?>;;6>+6>><>4-8484888&@D@@DD<D;D>>?<9DD;6DDC<DD;<88@#####
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
17 @ILLUMINA-545855:49:FC61RLR:2:1:5626:1554 1:N:0:TCCTGA
0
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
18 TCTAATATTATATATATCTGTGTGTGTATATATATATATACACACACACACACACATTGCTATTGTTAAATTAACCACCTTTTTATTTATAATACTATTATAACACTTATCTGTAT
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
19 +
2
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
20 3<=<<;BEECCAEABEB@B:@7679219<:>=B=@@??A9;B@@@@######################################################################
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
21 @ILLUMINA-545855:49:FC61RLR:2:1:5879:1238 1:N:0:TCCTGA
0
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
22 TCCCCACCCTGTCATGGTTCTATGTTTTTGTTTTTGTTTTTGTTTTTATGGTTTCCGTATTCCACATTAAAACCTTATGTAACGTACGGGCCAATAAATAGTTACTCGCCATATCC
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
23 +
2
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
24 ####################################################################################################################
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
25 @ILLUMINA-545855:49:FC61RLR:2:1:6204:1090 1:N:0:TCCTGA
0
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
26 TGCTTTGGTTCTAAGAGAAAAACAATTATTATAAATGTTTATAATTGATGATAAGCATTTTTGTACAAAGCCAAGACCATTCTGAATGAAGCACCCAAAAAGCCCGGAGGCAACAA
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
27 +
2
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
28 ####################################################################################################################
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
29 @ILLUMINA-545855:49:FC61RLR:2:1:8044:1926 1:N:0:TCCTGA
0
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
30 TAGATTTTTTTTTTTATATATATATAAATATAGATGTACATATATTTATATAAATATAAAAGCACAGCATCCTCCTGTCTCTCCTCCTGATTTATTATGGTTAAAGCTTGTGACAG
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
31 +
2
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
32 HHHHHHHHHHHHHHHFHFGFHEFFDF92=@=>;;;=HHHGHHHHHHHHHHHHHHHHGHHHFHHHHFHFDHHHHHHHHHHHHHHHHGHHGGHHHHHHHHHHEHHHHGEHHHEFE>EB
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
33 @ILLUMINA-545855:49:FC61RLR:2:1:8157:1636 1:N:0:TCCTGA
0
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
34 TACTAGTCTAATAATTGCAGGCAGCTGAACTAGATAGGTCCTAAAGTACAGTGGGGAGGCTGGTGTGTGTGTGTGCATGGGATTGTCAGCCTTACCATCAGTCCTGATTTGTAGGT
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
35 +
2
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
36 HHHHHHHHHHHHHFHHHHHGHHHHHHGHHHHGHHHHHH>HHGGGGFFHHHHGHGHHFHHHHGGBGDCAC>CBDBDDCFGED@BDDB@BBBBECCD@<CC>C=?9==@CECB=BBB8
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
37 @ILLUMINA-545855:49:FC61RLR:2:1:8899:1514 1:N:0:TCCTGA
0
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
38 TCTTTATCTAAACACATCCTGAAATACCATCTGTTACACACACACACAGCAGTGGAAGTATAAAAAAAAATCTGGACATCTCAAAATAATTGCGTTTCTGAAGTGTTACATTTTTC
3f908e7fff4f Uploaded first version to toolshed.
pjbriggs
parents:
diff changeset
39 +
2
b6ccc7dd7b02 Version 0.02.04.3.
pjbriggs
parents: 0
diff changeset
40 IIIIIHIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIGIIIIIGIIIIIIIIIIIIIIHHGIIIIHIHHHHIHHHHHHHGHHHHHGFHEHEHHHHHHHII>