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Version v0.02.04.5: handle large output files
author pjbriggs
date Tue, 06 Jun 2017 08:54:49 -0400
parents e1a14ed7a9d6
children 5e133b7b79a6
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5:8159dab5dbdb 6:a73c48890bde
58 ======= 58 =======
59 59
60 ========== ====================================================================== 60 ========== ======================================================================
61 Version Changes 61 Version Changes
62 ---------- ---------------------------------------------------------------------- 62 ---------- ----------------------------------------------------------------------
63
64 0.02.04.5 - Update to handle large output files which can sometimes be generated
65 by the ``pal_finder_v0.02.04.pl`` or ``pal_filter.py`` scripts (logs
66 of hundreds of Gb's have been observed in production): log files
67 longer than 500 lines are now truncated to avoid downstream problems.
63 0.02.04.4 - Update to the filter script (``pal_filter.py``) which removes some 68 0.02.04.4 - Update to the filter script (``pal_filter.py``) which removes some
64 columns from the output assembly file. 69 columns from the output assembly file.
65 0.02.04.3 - Update to the Illumina filtering script from Graeme Fox (including 70 0.02.04.3 - Update to the Illumina filtering script from Graeme Fox (including
66 new option to run ``PANDASeq`` assembly/QC steps), and corresponding 71 new option to run ``PANDASeq`` assembly/QC steps), and corresponding
67 update to the tool; add support for input FASTQs to be a dataset 72 update to the tool; add support for input FASTQs to be a dataset