Mercurial > repos > pjbriggs > pal_finder

diff test-data/illuminaPE_assembly.out @ 4:cb56cc1d5c39 draft

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Updates to the palfilter.py utility.
author pjbriggs
date Mon, 21 Mar 2016 06:52:43 -0400
parents e1a14ed7a9d6
children
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--- a/test-data/illuminaPE_assembly.out	Wed Feb 24 08:25:17 2016 -0500
+++ b/test-data/illuminaPE_assembly.out	Mon Mar 21 06:52:43 2016 -0400
@@ -1,2 +1,2 @@
-readPairID	 Forward Primer	 F Primer Position in Assembled Read	 Reverse Primer	 R Primer Position in Assembled Read	 Motifs(bases)	 Assembled Read ID	 Assembled Read Sequence	 Raw Forward Read ID	 Raw Forward Read Sequence	 Raw Reverse Read ID	 Raw Reverse Read Sequence
+readPairID	Forward Primer	F Primer Position in Assembled Read	Reverse Primer	R Primer Position in Assembled Read	Motifs(bases)	Assembled Read ID	Assembled Read Sequence	Raw Forward Read ID	Raw Forward Read Sequence	Raw Reverse Read ID	Raw Reverse Read Sequence
 ILLUMINA-545855:49:FC61RLR:2:1:19063:1614		1		1	AT(14) AT(14) AT(14) AT(14) 	>ILLUMINA-545855:49:FC61RLR:2:1:19063:1614	TATATATATATATACACATATATATATATATTTTTTACATTATTTCACTTCGCCCAAACTAGAGAGTCTAACAAAGTACAACCCAGCATATTAAAGTTCATCTCAGTTTTGTTCTGAAATGAGAAAAAAATATATATATATATGTTTATATATATATATA	>ILLUMINA-545855:49:FC61RLR:2:1:19063:1614	TATATATATATATACACATATATATATATATTTTTTACATTATTTCACTTCGCCCAAACTAGAGAGTCTAACAAAGTACAACCCAGCATATTAAAGTTCATCTCAGTTTTGTTCTG	>ILLUMINA-545855:49:FC61RLR:2:1:19063:1614	TATATATATATATAAACATATATATATATATTTTTTTCTCATTTCAGAACAAAAGTGAGATGAACTTTAATATGGTGGGGTGTATTTTGAGAGACTCTCTAGTTTGGGAGGAGTGA