Mercurial > repos > pjbriggs > pal_finder

diff test-data/illuminaPE_assembly.out @ 3:e1a14ed7a9d6 draft

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Updated to version 0.02.04.4 (new pal_filter script)
author pjbriggs
date Wed, 24 Feb 2016 08:25:17 -0500
parents b6ccc7dd7b02
children cb56cc1d5c39
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--- a/test-data/illuminaPE_assembly.out	Fri Dec 04 07:43:30 2015 -0500
+++ b/test-data/illuminaPE_assembly.out	Wed Feb 24 08:25:17 2016 -0500
@@ -1,2 +1,2 @@
-readPairID	 Forward Primer	 F Primer Position in Assembled Read	 Reverse Primer	 R Primer Position in Assembled Read	 Predicted Amplicon Size (bp)	 Motifs(bases)	 Assembled Read ID	 Assembled Read Sequence	 Raw Forward Read ID	 Raw Forward Read Sequence	 Raw Reverse Read ID	 Raw Reverse Read Sequence
-ILLUMINA-545855:49:FC61RLR:2:1:19063:1614		1		1	0	AT(14) AT(14) AT(14) AT(14) 	>ILLUMINA-545855:49:FC61RLR:2:1:19063:1614	TATATATATATATACACATATATATATATATTTTTTACATTATTTCACTTCGCCCAAACTAGAGAGTCTAACAAAGTACAACCCAGCATATTAAAGTTCATCTCAGTTTTGTTCTGAAATGAGAAAAAAATATATATATATATGTTTATATATATATATA	>ILLUMINA-545855:49:FC61RLR:2:1:19063:1614	TATATATATATATACACATATATATATATATTTTTTACATTATTTCACTTCGCCCAAACTAGAGAGTCTAACAAAGTACAACCCAGCATATTAAAGTTCATCTCAGTTTTGTTCTG	>ILLUMINA-545855:49:FC61RLR:2:1:19063:1614	TATATATATATATAAACATATATATATATATTTTTTTCTCATTTCAGAACAAAAGTGAGATGAACTTTAATATGGTGGGGTGTATTTTGAGAGACTCTCTAGTTTGGGAGGAGTGA
+readPairID	 Forward Primer	 F Primer Position in Assembled Read	 Reverse Primer	 R Primer Position in Assembled Read	 Motifs(bases)	 Assembled Read ID	 Assembled Read Sequence	 Raw Forward Read ID	 Raw Forward Read Sequence	 Raw Reverse Read ID	 Raw Reverse Read Sequence
+ILLUMINA-545855:49:FC61RLR:2:1:19063:1614		1		1	AT(14) AT(14) AT(14) AT(14) 	>ILLUMINA-545855:49:FC61RLR:2:1:19063:1614	TATATATATATATACACATATATATATATATTTTTTACATTATTTCACTTCGCCCAAACTAGAGAGTCTAACAAAGTACAACCCAGCATATTAAAGTTCATCTCAGTTTTGTTCTGAAATGAGAAAAAAATATATATATATATGTTTATATATATATATA	>ILLUMINA-545855:49:FC61RLR:2:1:19063:1614	TATATATATATATACACATATATATATATATTTTTTACATTATTTCACTTCGCCCAAACTAGAGAGTCTAACAAAGTACAACCCAGCATATTAAAGTTCATCTCAGTTTTGTTCTG	>ILLUMINA-545855:49:FC61RLR:2:1:19063:1614	TATATATATATATAAACATATATATATATATTTTTTTCTCATTTCAGAACAAAAGTGAGATGAACTTTAATATGGTGGGGTGTATTTTGAGAGACTCTCTAGTTTGGGAGGAGTGA