view test-data/454_in.fa @ 3:e1a14ed7a9d6 draft

Updated to version 0.02.04.4 (new pal_filter script)
author pjbriggs
date Wed, 24 Feb 2016 08:25:17 -0500
parents 3f908e7fff4f
children
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>FW1N29Q04EHWSH rank=0000058 x=1727.0 y=431.5 length=236
AATAGTATAATGCACAGCAGGCAGTTAACATGCATGTGAATTGTAACACATCTGTTATAC
ATTACTATTAAACTTTCTGACAGTTTCTCTTTAGGTGCTTGCCCTGCCAGGCTCCGTTGT
GTAGGGTTAAAGAACAGTCGTTTACCACCTCGCAACCTGGTAAGGATCCATAATATTCCC
GTAATGTGGTATCAGACAGTTTGCATTGGTGCTTAGTACCTTTTAAATTTAAATTT
>FW1N29Q04ECSPS rank=0000063 x=1668.0 y=3534.0 length=259
TTTATGAATTTATCTATGTAACATTTGGCTTGGATGCTTCCTTAATTTAGCAAAGTGTCA
TTGGCGCACTCCATCTCTTCCAACTAGTTTAATATTTTTATCATTTGACATCTGTTCAGT
TAGGAGCAGGTCAGTTCTAAGCAACTAAGCATATGTTGACAAACTTAGCAGAAATGTTTG
AGGCTTAGTCATTACTTACACAAGAGAGAGCAACAACTTACATTGATGAAATTGATCTTT
GCTTATTTTAACCAGTTAT
>FW1N29Q04ECFP3 rank=0000073 x=1664.5 y=3081.0 length=55
TTTGGCCCTGTATACCAATATATTGCGCTTTGATGATGCCTCCTCCCCACCCTTT
>FW1N29Q04EIN9F rank=0000081 x=1735.0 y=3265.0 length=51
ATATGAGTATATAGGCCAAGGGTGGGAGGAGGCATCATCAAGACACCATAT
>FW1N29Q04EE3VT rank=0000085 x=1695.5 y=727.0 length=223
GTTGCCTCATATTCTCTACGAGACATTAGTGTGGTGGTAATAGGATGCAGAATAACACTT
ATAATTCATAATTGTAATTCTTGAGTTAGAAGTGAGTTAGATAGAAAGACTCATAGTAAT
TAGGGATCTCACATGAGAAGGACACTTAGCAAAGGTAACAGATAGGACAGATGGCGGAGA
ATGCTCCAAATGACTCTGGTAAAATGACTAACAGTCAAGATAG
>FW1N29Q04ECD63 rank=0000097 x=1664.0 y=1101.0 length=199
TTCATGTCCTTCTCTATCACTCAGCCCTCCACTGTTCTCTCCCTCTCCGACCTTTCACCT
TGGCTTCTCTACTTTGTCAAATCACCAGGAGAGATTACCTGAAAGACAAACAGGAAGGAT
TTCTCAACTATTCAAAGCAATAGAAGTGGATTCTTAGTTGCAAACCACAGCATGTTCCTG
TTGACCCAGATCCTGTTTC
>FW1N29Q04EIIT4 rank=0000106 x=1734.5 y=330.0 length=354
TCTCAAGTCAAGCTGTCAATTTGCCATCTCAGCCAACTCCATCAGCTTCACCATCCATTC
TTCCACTATAGGTAATGTCTTATCTTTCCACCTCTGTGCATATAAAGCCTTGCTGCTGTT
ATATATAAACAAAGTTCCATAGGTTTTCCAACTGTTTATTCATCAACCGAAAGGAAGTCT
CTGGTTTTGATTTAATATTAAATCTTGAAAATCTTCTGTATACAGATATGTATCTTGTTC
CAGATTATTTTTGTCTTTTATAAGTCCACCAGAGATGTAGAGCAGCCTCCTCCAGCCAGC
TACTGGTTGGCTATGTTATGTGGATACAAGGGCTGGATCTAAAAGTCNGCATCT
>FW1N29Q04EW9OS rank=0000113 x=1902.0 y=186.5 length=85
GGTTAGTATTGAGACACGCTGTTGGCTTGGCCAGTGCTCCGTGCTAGTAATTAATAAGAA
TGCTTACATAGGTCATCCTGTTGAA
>FW1N29Q04ED6UB rank=0000114 x=1684.5 y=2961.0 length=344
TTGACATACACCTTAGGCCCTTCATTCATAATTAACGCTACATTTCACTTCCCTGCATAT
ATTTATCAATTCTACAAGATTAGATCATCTTCCTATTAGACCCTTCTCTTTCTTCTTCCT
TTCACAAACAATAAGAGATCTACAACATGTGTATCTTGTTTAACAGATAACCAATCTGTA
ATGATGAAACATTAAGCCTCTGCGCATAATAACTTATCTTTCCCATAGCTGCAAACAATA
ACGTAGATTAAAAGCCACATTTTGCTTTCATTAAAAGTACTTCTCAACTTTCATTGTCAG
GCAAACGTAAATGTATCTTTATTGTGGCTTCATTATGCTTTGTG
>FW1N29Q04EJ8OD rank=0000117 x=1753.0 y=2651.0 length=157
CATCCATGTTGCTAGTTGAGAGAACTTAATCATACTAATAAATTCATGTGTATTTGTATA
TGAGTTTCAAATCCATTAGATTACTTTCCATTACATCATGGAGGTGGGAAATCTGTGGCC
CTGCAAATTCTGCAGAATTACACCGGCCCACCCACTC
>FW1N29Q04EBJG5 rank=0000123 x=1654.0 y=2247.0 length=322
TGGCAATGGCAAGTTACTTTCATTTCAGAGCAAGATAAAGTGGCTGCTGCAATTATTACC
AAAGCTTCATAAATTACTATGCAACCTTTCAACTTCTCTAGAACTCTTCAACAAGTGAAG
AGGTAAGAGAAAGAAGCAGCTTATATCCATGCCATGTTATTTACAGTTAGCATGGTTTAT
TCTTCTAAATAGTACAGTATTTATGCTAATTTAGCATCAGTGCTACATCACTGTGTTTCT
CAACATTGTCCTCTTTGACAGCCAAATCATTTGCTTCCAGCTTGACTATGGCACATCTCA
AATCACAAAGCTTTCAAACTGC
>FW1N29Q04EKD0V rank=0000126 x=1755.0 y=1389.0 length=299
TGGCTCAGATCACCGCAGATGGAGACTGCAGCCATGAATTAAGACTCTTGCTCCTTGGAG
GAAGCTATGGCAACCTAGATAGCATATTAAGACAGAGATGTCACCTTGCCGACAAGATCC
GCATAGTCAAGCTATGGTTTCCTAGTAGTAATGTATGGCTGTGAGAGCTGGACCATAAGA
AGGCTGAGCGCCGAGATTGATGCCTTTGAACTGTGGTGCTGGAGAGACTCTTAAGAGTCC
CTGGACTGCTAGGAGATCAAACCAGTCAATCTTAAGGATCAACCCTGATTGCTCATTGG
>FW1N29Q04EKXU7 rank=0000132 x=1761.5 y=2529.0 length=150
TTACAACACCACTGGCAGAGGAATGGATCTAGGCAAATATGACATTGTGAGTAAGGCTCT
CAGGAGACTCTCTCCTCTTTATTCATGTTTGTCCTTTGTTTGTCTTGCAAAGCCGACCAG
CAAAAATAGTACCATCTAAAGCAAAGAAAT
>FW1N29Q04EOC22 rank=0000134 x=1800.0 y=2476.5 length=236
TTAATATTACCTAGAATAAATGATTTCATCCTTTTTATTATTTCTATATATGAAGTGGAC
TTTATTTTATTGGTTGGTTAATCTTCAGAGAAGAAATAGGAGACAGGATTTTTAAAATTA
GTAACTATTTCCATGAACCAAGGAATCTACTAAATGTTATGGAGGAAACATGGCCATCAT
TGATCTGCAGGTCCTCAGAATCATGTAGTAAATTTATGCAATATCATTAACTTGGC
>FW1N29Q04EF0UZ rank=0000135 x=1705.0 y=2505.0 length=273
TTCTATATCGCTTAACGAGGAGTCAAGCTAACTTGGAGGAGATTTATCTTTATGAGGGTA
GATGATGCCATTTATGAGGAAATGCAAGATCTTGTTGCAAGGAGCCAGTGTTGGTGATGA
TTCAACTCTTCCTCCTCCACAATCTTCTGAAATGACCTCCCTTCACCCTAGTTTGACCAC
TCTTCCTCCTAAACCAGCCTTCAAGCGGAAAGTCATTCTTGTTGAGGCAAAAAGGTTCTG
GGGGCATTTGAAGGGCGCAGGAGTGGGAGCAAA
>FW1N29Q04EH316 rank=0000142 x=1729.5 y=1660.0 length=60
TTTGGCCCTGTATACCAATATATTGCGCTTTGATGATGCTCTCCCACCCTTTGGCCCTGT

>FW1N29Q04EJHIK rank=0000147 x=1745.0 y=218.0 length=370
TTTAAATTATTTGTATAATGATGGGAATATCAATTTCCTAGATTTGGTCTTCCATGAAAT
CAGTATTTCCATGTCAACACCACCCAAAGAAATGAAATAAGTTGTGCAAGTGAGGTAGTC
TATGTAGAAATATAGAGGGTGACCTTGACAGAGAGAGGGAAGATCTGTTACCAAGGCAAC
AAACAGATAAACATGGCTTAAAACCCATACAAAGAGAGTGTTTTACAAACAGGCATCCCC
TAAGAAGATAAAAAGCACATTCAGACTTGCAAGATTTTGCAAAATATAGCCCATTCTAAA
TAGTTAGGCCTATGTGGCATCTGTTCCTTGGTCCAGGGCTACCCTTGTAGGGCTGACAAT
CAGTCTTTCT
>FW1N29Q04D6RZR rank=0000148 x=1600.5 y=1189.0 length=344
TGACTGATTACTATATTAACTATAATGTGGTTGGTTGGTTCAGTATGGGAATTCAGATTC
AATCAAACACCACACTTCCTGTGTTAGCATTATGTTTGACCCACCGTGTTTAAACAACTA
CATTATGGATTAACCATGACTTTCAAAGTTCCAGGCACCTTTCTAATCTGGAACTACTGA
ACCTGGAGCTTCTGCAAATAATTAATGCCTGTCAACTGACTTACACTTATTCCCTTCTGT
AACATTGCTGCATCTGGCAACAACGTGAGAATGTACAGCAGCCATGAAGGTCTTCTGTGT
TTCATCTGACAGAAGAATTTAGCTGGAGTTCAAGTACAATTAAA
>FW1N29Q04EFU7E rank=0000151 x=1703.5 y=3368.0 length=65
ATGATGCTGTCATCTAGGTGTTGTGGTTGGATGTCATGGTTGATGACAGTTGCATGTTAC
GTACC
>FW1N29Q04D78RB rank=0000158 x=1616.5 y=4037.0 length=274
TTAACCTGGTGATACAAATACCTGGATTTGCTGCTGGACAGCTGGAAAGAACTGCAACTG
TTCACTGGCCTATGAAAGGAGTTATTCAGATGCAATATATTTAACAAGGTGCTGATAAAC
TCAAACCTCACGCAAGAAGGAACTGATATGGCCATTGAGCAGCAGAAAAGTGGGCTGGGG
GATACATAAAATCTAAGTAGAAACTATGTTTGCCGCCTACCCAATCCGCTTTGTTCTAAA
ATGGGAAGCCTCAGAATTCACCGCTGTTCTAATT
>FW1N29Q04EUK6W rank=0000162 x=1871.5 y=2102.0 length=378
TTTGGTCTGGTAGTGTCTGGTTCACATCCTTGTCTTAACAATGACCTAGCAAGGGAAGAG
GAGGACTAGATCCATCATGAGAAGTGTCTGGATTCTCATAGAGGTGCCTTTAGTTAATTA
GGTGCCATAGAGTCATGTTTGATTTCTGCTGACTGAATGAACAATACCTGCCATCCTGAC
CTGATTCCAGTAATAATCTCTGCATTTCCCAAGCACATTCCAGTTAATTTATTTGATCCC
ATTCATCTGTGATCTAAGGGTTGACCAAGGCATTAGTCACCACTAGAAATGAGAGGGTGA
CAGTGACCTTGGATTGGATCATGTCTATGTGGACTCCATGCATGTGGATCCTGGTGGCCC
CTGATTCTGAGAAGCTCT
>FW1N29Q04EOQ8A rank=0000163 x=1805.5 y=328.0 length=252
GAATCTCAGGTATTAAGGAAATCATTGCAAAGTGATCAGGAGCTTCAAGGGCATTTAAGT
TATGGAATCATACACCATAAGGAGTAGATGATCTCTGGTTACCATAGGGACCTAATGGCT
AATACAGCAGCTCATCATCCCTACAGCACCTTTGACAGAGTCTTCCAGCAGGGACTACAA
AGAAGTGTGTTTCTTTGCACTGAAGAGTGATTTTCACCAGAAGGAACACCTGACAGAGAT
GCAGAGCTAAAT
>FW1N29Q04EOZ5Y rank=0000173 x=1807.0 y=3716.0 length=55
GGTTGAGAGAGTACATGAATGTTCAGTACAAGGCCAGTTTCTTGGGTTTAATCCC
>FW1N29Q04EGGLO rank=0000175 x=1710.0 y=2426.0 length=208
GCAATTAAGGCCTTGGCTACTGAGCTTCAGATGAAGTCAATTGAGAGGAGAAGAACAGCA
CAGGGAATGAATCAGTAGACATAGAATAGATCGATCTAGCTAGGACTTTTGTTGAGTTGG
AACAGGAGGGATATTGGAAGACAGATTTATAATAATTTAATAATGCTCAGAATCTGCTGC
TGTGTCTGGGTGGCCATGGTACAGATAT
>FW1N29Q04EKZW7 rank=0000178 x=1762.0 y=1097.0 length=403
GTTTAGTTGATTTGAACTGTGAGAATAATTTAATTCGACCAGAGTATAGAAACATAATTA
AACAACATTCCATTCATTCAATTTAATTTCATGGGAAAGAAGAGAGAGTGAGGCCACACT
CCCAATTACTTGTGGTCAGCAATCACTTTCTTTATTAGCATCAGTCACTTATTGGTTTCT
GACTGTTGAGGGCAGCAGGCGACTTTGCATCACTTCAGAATCCTCTGAGCCTCTTTCTTC
TCATGCTAACATCTTCTGGGTTTGCCAACTAATCTAATGTTCTGGCTCAATTGTGGTACA
TCCAAAATCACAAATAGACACATACGCGCACATACATACACAAAATATATTTATGTTTTC
AGAACAGAAGTGAAGCTTTGCAAAGCTGTGGATAGTCTGCTGT
>FW1N29Q04EP35X rank=0000180 x=1820.5 y=2307.0 length=298
TTTATTTACCCATCTTATTTGTGCAGCTGTAAGAGATTGATAAGGGGAAAAAGCAAAAGT
ATATGAATTTGTATTTGTATTTGTAATCAGAGGGATGTGTGTTTGTGTGTGTGTGTATAA
GGATCCATCCCTGGATTATGGGTTCCACTTCACTGGACATGTTTACCAGAAGTGAATATA
GCTATTCTAGAGGGACATTTCTGGAACACAAAAAGTAAATTAGATGAATCACATTGCATG
TATATTTAAGCAATTTAAATGACACACACACACACACACACACACACACACACACACA
>FW1N29Q04EQDJ2 rank=0000185 x=1823.0 y=2192.0 length=65
TTCCTGATAGGCCAGGATTCTGATTAACCTCTGCCCACTACAGGATGCTTACATGAGCTC
CTGGT
>FW1N29Q04EK7RS rank=0000186 x=1764.5 y=3078.5 length=112
AATGATTACGAGATCATCTCACCAACACCTTCTCTGACTCATGGCTAAGATCAGCTGGAA
GGCCTTGCTTGTGACCCATTGGGAGGACTCATCTTAATCTGGGTTGAGAGCA
>FW1N29Q04EO2M2 rank=0000190 x=1808.0 y=2828.5 length=262
TGGTCCTTCAGGTCTTCCAACAGTGCACCCATTGCCTCCGTAACTGAGTCCATCCACTTT
GCTGCTGGTCATCCTCTTCTCTTCCTTCCATATTTCCCAGCAATAGAGCCTTCTTCAGGC
AGTGAGGTCTTCACATAATGTGTCCAAAGTAGGATAATTTGAGCCTGGTCATTTATGCCT
CAAATTCTTTACAGGTTAGATATCACAGCAATGACTAGGTTCTTGGACAGTAGTTAACAG
TTAAGATGTTAATGTTTATTAA
>FW1N29Q04EXPGO rank=0000196 x=1907.0 y=150.0 length=120
GACAGAACACACTTACAACTAGCCATATATAAGCAATGATCAGGCACCTGCCAATGTCTG
AACTAAGGTAAGGGCTACTCATCAGTCACCTTCCAGACACAGATCAAGAAATCCAGAAAG

>FW1N29Q04EBESH rank=0000203 x=1653.5 y=271.0 length=142
AGTCATGCAAGCCTAATCATGTAACAACATTTAAATTAAGCAAATACACTGATACCTTAT
AGTTTGACTAAAGACTTTGGCTTTCCATAAACAACTCCAGTAAACTGATTTTGCTTGCTG
TAGTATTCCTAGCTTAACTATT
>FW1N29Q04D8NWF rank=0000214 x=1621.0 y=3181.0 length=365
TTAGGCTTAGTACATTGTATGAACTCAGATATTGTGATATATAAACCAGGGCTGGTGGCT
CAACATGCTGGGTAAATCCAGCCAATTATGATAACTAGAATAGTATAGCAGTTAGTGTTA
AACTTGTATAAGGGAACTCAAGTCCAAGTCCTCACTCATTCATGGAACGCCTTGTGTGAT
TTTGGGCTAGTCACTCTTCTCAGCCCAACCTATCTCACAATCATGATTTAGAAATAATGG
CTTAGCATGACAAATGGATCCAATCATATTCAGTATTTATTTGTTTGGGGGATGTGATGT
AGAAGCATGGCTCAGTGATGCTTCTACCAAATGATACTCTCTCAAGTGTCAAACCTTCAG
TACAG
>FW1N29Q04ETFO7 rank=0000224 x=1858.0 y=1577.0 length=148
TTGGCCTTTCTTGATAGATAATTTCTAGTAATTTCACACATACCCGTGCTGGACCATCTC
CAACACCATCTGTCCTGGGCTGACATAATTTCATCAGTTGCCCATAAACATGGAGAGTAA
TGGGTTTCAGGCTGTGGGGTAGGGAGGC
>FW1N29Q04ECPCP rank=0000226 x=1667.5 y=3271.0 length=376
TTAGTGATGACATCACAACTGGTTGGTGGTGCTAACAACTGCTATTGAATGTGTCTTCTC
GATATATCACAGAGCCTAGCTTGTAATGCAATAACAACTAGCTGAATACATGATTTAATT
GTTTGTTGCCCAGCTGTACTAATAAGCAAGCTTGATGTTAGGGATCACCCAAGGTCATTT
CCTTAATGCTGCTAACCTGCTGGAGCTGTCATTTATTACTAGATTTGTTGAATTATGACC
AGTGTGTTCTAAAGAGCCAGATGTTTAGTCTAAAGAATAACACATGATCTAGTAGGGATT
ACAAGAGCTCCAGTTTCCCTCTGGAATTTGTTGGTCATGGCTTGTGATGATCAAAGTTGA
ATATGCCTGAAATAAT
>FW1N29Q04ECVNR rank=0000229 x=1669.5 y=3253.0 length=386
TTCTCTGCAAGTTGGTGGCACACATGCAGGATGGCTAAGATTATCATCTGAAATGAAAGC
CACAAGGTGAACTTCCAACAAATACCATGAAAAATGACTGACCTGCAAAAGGTAGAGGTA
ATAAGAACTCTGGGAAAGTTGAGCAAGTACTTAAAGAATCAGTGTTAAAATGTCATGCCA
CTGATGTGTGTTAATTTCATATGGTAATTTATATGTATGGATGAGATAATTCTTGCACTG
TAAATAGAATAAGGGAGAATAGAGAAAACTGCAGCCAGGTGAGTAATATTTCTTTTAGCC
TGTGCAGGTGTTATTTGTTGAAAAGGTGTTGTTCTACTGTCAGGCTCAGTCCAAGAACAG
TTCATCCAAATTCATTTCATTTATTG
>FW1N29Q04EFJFR rank=0000232 x=1700.0 y=405.5 length=379
TGGCAATGGCAAGTTACTTCATTTCAGAGCAAGATAAAGTGGCTGCTGCAATTATTACCA
AAGCTTCATAAATTACTATGCAACCTTTCAACTTCTCTAGAACTCTTCAACAAGTGAAGA
GGTAAGAGAAAGAAGCAGCTTATATCCATGCCATGTTATTTACAGTTAGCATGGTTTATT
CTTCTAAATAGTACAGTATTTATGCTAATTTAGCATCAGTGCTACATCACTGTGTTTCTC
AACATTGTCCTCTTTTGACAGCCAAATCATTTGCTTCCAGCTTGACTATGGCACATCTCA
AATCACAAAGCTTTCAAACTGCAATTTGCACACTGGAGCTTGGAGGCAAACTTATTTTGT
TCACGGAAACTCTCACTCC
>FW1N29Q04EGERL rank=0000233 x=1710.5 y=47.0 length=274
TTGAATCTGATCAGGAAGGTTCAACTGGTACAGAATGTAGAAGCCAGGTTACTGAGTGAG
TCACCCAGTCACGTTCATGTTACTTCTTCATTGAAGCAACTGCATTGGATGTCAATTACC
AAGCCAGGTTCAGAGTTTGGTTAGGATATATAAAGCCTTAAACATCTGGAAACCAGGATG
CCCATCAAATTGCCTTTCTGTTATCAACCTGATTACTCACTGAGATCATCAAGTGAGGTG
CTGCAATGTGTAATGAATGCTGGTGGTTGCTTGT
>FW1N29Q04EILAM rank=0000235 x=1734.0 y=3516.5 length=127
TTTGGACATATGTTCAAGCCAAGGTTAGTACATTTCTCCTTCAGACCTCCCAGATGCACT