Mercurial > repos > pjbriggs > trimmomatic
diff test-data/Illumina_SG_R2.fastqsolexa @ 11:59054f086eca draft
Version 0.36.6 (output logs and handle fastqillumina and fastqsolexa inputs)
author | pjbriggs |
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date | Fri, 05 Oct 2018 05:19:17 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/Illumina_SG_R2.fastqsolexa Fri Oct 05 05:19:17 2018 -0400 @@ -0,0 +1,40 @@ +@MISEQ:1:000000000-A2Y1L:1:1101:19264:2433 2:N:0:NAAGGCGATAGATCGC +GCCGATATGCAGATGCCGTTGATTGCTGCCAGCATAGCAGCCATTGCCGGCATATCCTTTGTGACTGTGCGCCGACGCAAGAAGGCGGCCCAGATAACCTAGCCCAGAAACGATACGGCGTCTCTACCCTCATCTGTTATGCTGATCCAGTGATTCTTGCCTACCTTCTTTACGGTGATGTAATGCCAGTCGTTGGCAAGCGGGTCTATAATATTCTTGGCGAGGCTTGCAAACCTGGCCTGCGAGTGGT ++ +^^`^^`aacccccccceedddeghhhhgghhgheghhgggegghhhhhgggegghhhhhheeegghhgfcdgg``dggggeggggc\daadddddeeeeddddbdeeddeeeWH^^``^Z]cdddeeeeH^W`dbedeeeeeed`dddbeeebdddeeeeeedded`bddb^b``bdeddded^O^d`b```dd``bdd`HMSWMEOHPYY`^b``^bbYYSEESEOOEWY^`W^d>>>>>>>>>>>>>> +@MISEQ:1:000000000-A2Y1L:1:1101:18667:2435 2:N:0:NAAGGCGATAGATCGC +GATGACATCAGCACAGGTTCCGCTTCCGCTGTCGCAACGACGTGGCTGCCATCGATTATATTCAATTCTGAGTGCTGCCGTAGGGCTAGATGTAAGACTCACGTTCGGCGACCAGATTAGTCGGTAGTGGCATGTGACTCCCCGTTGTAGACTACGATTAGACCCATCTCTCTGGCCACAGCTAACTCGCTCAACTCTCATCCCTCCTGGGGTATCTACCAGCGATACGCGTAGAACTCGTGCCTCATGC ++ +^^^^^aaaccccccccfeefffgggghggggggghgggghgabddgeeggghhgeggghhhhhhhgheafefegggghgd_dddggeeggee^begggggfffffffffffffffffffdbfffZddYbdfff^>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> +@MISEQ:1:000000000-A2Y1L:1:1101:17523:2436 2:N:0:NAAGGCGATAGATCGC +GAATATAGAAACGGGAGTATAGTGGTAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGNNCGCCGCTAAGACTGCCGTCAAATTCCTGAGCGGTAGTGATGCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGATCTAGTGTAGATCTCGGGGGGCGCCGGCACATTCAAAAAAAAAAAACAGGAAAATGACATAGGCGTGTGTGA ++ +^^```aaacccccdccffbeffggheeggg>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>UU^\>>SUU__dddfbffb]bd[dfddfdfbdfdffffWW[^P^b^dfbd^ddb^bb^bbdffbffbfbW^bb`b[``EQQQW]HOHPbY^>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> +@MISEQ:1:000000000-A2Y1L:1:1101:15489:2437 2:N:0:NAAGGCGATAGATCGC +GTCCACGTGAAATCCCGAGCGTCCCTCTCCCTCCCGAGAACCCGGTCTATATCCCACGATTTTTGACCGAACAAGGATTGACCTCATCCAACTCCGAAGCCCGCCGCCTACTTTCCCAAGGCGCGATAAAGATTGATGGAACCCCGCCCAAGGCTGACGAAATCCCCGCCAACGAACTGTCGGGCCGACCCATTCAAGTGGGGAAAAAAACCTTTCCCCGGGTTGACAAACCGCCAAACAACCTCACCAA ++ +^^^^Xa^^^`cX^accddccccgggggegegeegggggggggdgg]bdfggefggfgg\eggggbJbfdabb[be_KSbe_beaeeeece^aSac__cG]bdUaaGGMGMY```dd^`^`>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> +@MISEQ:1:000000000-A2Y1L:1:1101:18851:2442 2:N:0:NAAGGCGATAGATCGC +TCTCCTCAGTACGGGGGAGGAGGTTCGCTCGGCGGACGTGCGGCCCTACGCCAGACTCTACCACATGGTTCAGCAGGAGCTGGAGCACCGCGCTGTGTCCGGGGACTGGGAATACACCATCAGCCCCGGCGAGGAGTGGCAAGAGACGGAGCCTCTGCAACCAGCAGAGGTTGCCAAGCTGGACTATCACAGCTACGTCACCAGACGCTTCATGAAGGTCACCCAGTCTGACCCTGTGAACCAGGCCGGG ++ +`^^`^aaaccccccccffffffgdeggfdggghgdgggggcgadgfeeedffcddcfffffdffddbd^dfbdfdfffbdddffbddffScZZS`ffffffW]ff`^dfffddfddfffbffdfdffffcW[``cdbdbdff^bbbYWbbEEWYbY^bbdH^GObbOYH^YbY^bbbW^bbdbXHYYbbbb^bHYYMbdffdbXXbSEGGMOOHYbY^HPOYbb>>>>>>>>>>>>>>>>>>>>>>>>>> +@MISEQ:1:000000000-A2Y1L:1:1101:15290:2442 2:N:0:NAAGGCGATAGATCGC +GCGTGGATTTGATTCGGTTTATGGGGCGCGGCCGCTGAGGCGGGTCATTCAGACGGAGATTGAGAATCCGCTAGCGGATAAGATTTTGCGGGGGGAGTTGGCGGAGGGCGATCGCTTGATGCTTGATTATGGAGGGGAGGGGGAGAAGATAGGTTTTACGAAAATAGAGGCGGAGGGGTCGGCGGCATAGAGGGTAATTTTTTGGGTTTTTTTCTGTGTCTTATACACAACTGAACGTGCCGACGAGCGG ++ +^^^^^_^accccccccedddeeghhgdggggcgggggdggggggW`ceeeceecPcZ]PKZZZZRaKRaZZHYaZPZEEOYYOHPY`HYZ]ccESEWMYY``]cQQ]c`]EEOMMOW^HY`HP^YHO^>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> +@MISEQ:1:000000000-A2Y1L:1:1101:18106:2444 2:N:0:NAAGGCGATAGATCGC +GAGTTACTATTACAGAGTGGAGCTAATGTACTGGCAGTTGACTGCAAAAGAAATGCTCCAATTCATGTTGCATGTGCAAATATGAGCTTAGAGTGTTTAAAGATAATTTTGTGCCACAAAAAATGCAACCCAAACCAACAAAATGCAGTGGGAGACACTCCACTCCACACCTTATGCAGTTTGGGGACTTGTGATATGAGAATACTACCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGAACAAG ++ +^^^^^aaaccccccccfbefefhhhhhgeghhhhghgef\dgghfhhhheghgcfgfggghghg\bfgffgegggegefggegN`bceff^ed^bceeggggghhgeggh]bdcfeggggggggceggegggee`eeffffffdcdf]]c`bbZ^dff]bdd`]`d`bbdd^YbYYbbYYYbYbd[b[XbY^b^H^bddbbbHYb^b^dY^YbYbYbbbbdY^bPHOHPPMWbGQ^ESW]f>>>>>>>>> +@MISEQ:1:000000000-A2Y1L:1:1101:15892:2446 2:N:0:NAAGGCGATAGATCGC +GTATTGCTGGCACCATCAGTCACCGTGTAGTGTATTCTATCGATTCCGTCACGCTGGCCCTTGAGCGTGCCCGAATCATACGTTATGGTGGTACCTGATACCGTGGCACTAGTGCCGTCGGTGTCTGCGCCATCCGTACGGTCGAACACCACCACGAGGGTATCGGCGTCCTGGTTTGCGTCGGGGATGCGGTCACCCTCTAAAAGATTTATGGAGGTCGTCTCTTGTGTCTGGGCCGGGGGGAAGATGT ++ +^^^^^aaaccccccccffffffhhghheggghgghegfgffgghghhcdeegde_ceghhghhhfg`bcbeeggghghhghgfgggafefddggggegeeggcecbdffeffefff_caddddfb]bddffffffdO^bcfffc]ddQbdWbdfdd[]]]GYbddfc`ESQWbdY^XbbSWQW]ES[GOY]EOSGP^dHWYPbb^^GYbbddbbHHWGOTSW^bHY^YHOPOHYbb>>>>>>>>>>>>>> +@MISEQ:1:000000000-A2Y1L:1:1101:17903:2450 2:N:0:TAAGGCGATAGATCGC +GGCCAACACTGTGGTCACTATCTCTGGCACTGGTCTGCTACCACATGGAGTTGACACCGGAGACCCAATCACCACAGCAACAGTGTGGATTGACCACACCCCCTGCACCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGATCTAGTGTAGATCTCCGTGGGCGCCGCATCATTAAAAAAAAAAAAAAAAAACATAACTCTCAAACGCGAATAGAGCAAGAAACAGACAGCTAAAGTACAAACAAT ++ +TT[^^^^^cccaaccaeeeeeebgghhgghhhhhhhgfgghhhhggfghhgegghhhhgggbcghhhgeeghhhhhbeeghgdbfbfdghg\eggggggggggeZeeeeecceeeeeeedeeeededace`dd`dd_ddcc]cccWWOY^>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> +@MISEQ:1:000000000-A2Y1L:1:1101:15113:2451 2:N:0:TAAGGCGATAGATCGC +GAGGGGAGGAGGGGAAGGGAGAGGGGAAGAGAGGAGAGGAGAGGAGGAGGAGAGAAGGGGGAATGAGCAAGTAACATAATTACATAGCTGTGTCTGAATCTCTTTGAGCACCCTACCTCGGCATAGGAGGCTAGCTGGTGAGGGAGGGAGGGGCAGACTGACAGGCCGAGGATGGCCTTGTGGTTGGCAAACTCCGTGGGGCGAGTCTGGGCTGCTGCATGCGCATCTGAGACTGGCTCTTGTACACATC ++ +^^^^^_X_a^a^aaaadddea__ddgdb^aeLbd_ccdgKTJTbK]_JbdJ[^\dLbedbdggcacK^ceeKScccaeZ\aZZaacZcKaS\adddddbaKKaaZ^b^bddddHZZbY`b^bZ^bbY`ddd^dW`bdYOY`^``W`SM^^W^WQSWGWY`bddd^dGSZ^Z^>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>