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changeset 13:898b67846b47 draft

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Updated to Trimmomatic 0.38.
author pjbriggs
date Mon, 08 Jul 2019 07:09:10 -0400
parents 51b771646466
children d94aff5ee623
files README.rst trimmomatic.xml
diffstat 2 files changed, 3 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/README.rst	Mon Dec 17 04:39:08 2018 -0500
+++ b/README.rst	Mon Jul 08 07:09:10 2019 -0400
@@ -71,6 +71,7 @@
 ========== ======================================================================
 Version    Changes
 ---------- ----------------------------------------------------------------------
+0.38.0     - Update to Trimmomatic 0.38.
 0.36.6     - Added trimlog and log outputs; add support for ``fastqillumina``
              and ``fastqsolexa`` input types
 0.36.5     - Remove tool_dependencies.xml and always use conda to resolve tool
--- a/trimmomatic.xml	Mon Dec 17 04:39:08 2018 -0500
+++ b/trimmomatic.xml	Mon Jul 08 07:09:10 2019 -0400
@@ -1,10 +1,10 @@
-<tool id="trimmomatic" name="Trimmomatic" version="0.36.6">
+<tool id="trimmomatic" name="Trimmomatic" version="0.38.0">
   <description>flexible read trimming tool for Illumina NGS data</description>
   <macros>
     <import>trimmomatic_macros.xml</import>
   </macros>
   <requirements>
-    <requirement type="package" version="0.36">trimmomatic</requirement>
+    <requirement type="package" version="0.38">trimmomatic</requirement>
   </requirements>
   <command detect_errors="aggressive"><![CDATA[
   @CONDA_TRIMMOMATIC_JAR_PATH@ &&