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4
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1 COMMAND LINE:
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2
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3 ./weeder2 -f /home/pjb/projects/galaxy-tools/tools/weeder2/test-data/weeder_in.fa -O MM
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4
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5 MOTIFS SUMMARY:
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6
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7 1) GTTTCAATTA (TAATTGAAAC) 2.38
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8 2) CATTTTAA (TTAAAATG) 2.082
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9 3) GTGAATTA (TAATTCAC) 1.969
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10 4) TCAATCAT (ATGATTGA) 1.944
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11 5) TGTTTAAT (ATTAAACA) 1.874
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12 6) ATTACT (AGTAAT) 1.823
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13 7) TCACAT (ATGTGA) 1.8
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14 8) TACATT (AATGTA) 1.773
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15 9) TTGACA (TGTCAA) 1.733
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16 10) AATAAT (ATTATT) 1.714
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17 11) ATGACT (AGTCAT) 1.702
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18 12) TTGAAA (TTTCAA) 1.693
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19 13) ATTTTA (TAAAAT) 1.691
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20 14) TAAACA (TGTTTA) 1.685
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21 15) ATGATT (AATCAT) 1.678
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22 16) AGTATT (AATACT) 1.664
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23 17) TTGAGT (ACTCAA) 1.574
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24 18) TAAAAC (GTTTTA) 1.572
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25 19) GTGAAT (ATTCAC) 1.568
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26 20) AATACA (TGTATT) 1.564
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27
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28
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29 DETAILED RESULTS:
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30
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31 1) GTTTCAATTA (TAATTGAAAC) 2.38
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32
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33 Matrix: MAT1 GTTTCAATTA
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34 A 0.1739 0.08497 0.1198 0.1538 0.186 0.8184 0.6871 0.09156 0.1002 0.7403
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35 C 0.06162 0.05256 0.05743 0.07398 0.5592 0.08087 0.0987 0.08757 0.149 0.08036
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36 G 0.591 0.06033 0.07754 0.07127 0.1033 0.0563 0.08422 0.04673 0.08862 0.06081
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37 T 0.1735 0.8021 0.7452 0.701 0.1515 0.04446 0.1299 0.7741 0.6622 0.1185
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38
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39 OCCURRENCES:
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40 >chr1:8797248-879744 35 GTTTCAATTA 1 174 +
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41 >chr1:3467418-346761 1 TTTTCAATTA 0.934855 187 -
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42 >chr1:5072821-507302 8 GTTTGAATTA 0.928879 153 -
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43 >chr1:9932599-993279 45 GTTTCAATCA 0.919923 124 +
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44 >chr1:9013525-901372 37 GTTTCACTTA 0.908195 51 +
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45 >chr1:9956513-995671 48 GTTTCCATTA 0.88494 114 -
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46 >chr1:9813405-981360 44 TTTTAAATTA 0.876639 141 +
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47 >chr1:7768736-776893 34 ATTTTAATTA 0.871314 131 -
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48 >chr1:9956513-995671 48 ATTTCAATCA 0.854845 177 -
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49 >chr1:7444756-744495 33 GTTTAAATGA 0.852292 99 +
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50 >chr1:7386917-738711 29 TTTACAATTA 0.849485 45 +
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51 >chr1:7303541-730374 27 GTTTTAATGA 0.8469 8 -
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52 >chr1:5805347-580554 10 GTTCAAATTA 0.843965 178 -
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53 >chr1:7768736-776893 34 GTATTAATTA 0.83883 127 +
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54 >chr1:6588721-658892 21 GTTGTAATTA 0.83815 138 +
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55 >chr1:7388025-738822 30 CTTTCAATCA 0.83733 1 +
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56 >chr1:9962925-996312 49 GTCTAAATTA 0.834485 190 -
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57 >chr1:4562216-456241 4 ATTTCAACTA 0.827808 147 +
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58 >chr1:6878570-687877 25 GTTTTGATTA 0.817499 91 -
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59 >chr1:6396504-639670 18 GTTTCATTTT 0.816051 171 +
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60 >chr1:7768736-776893 34 GTTTCATCTA 0.805952 147 +
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61 >chr1:9460371-946057 38 GTATCAATTT 0.805422 84 +
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62 >chr1:6721868-672206 23 GTTTCAGATA 0.799444 28 -
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63 >chr1:6090845-609104 11 TTTTTAATCA 0.79117 168 -
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64 >chr1:9948240-994844 47 GTTTCAACTC 0.789921 109 -
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65 >chr1:6266967-626716 15 GCTCCAATTA 0.785236 145 -
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66 >chr1:5072821-507302 8 GTTTAATTCA 0.774774 150 +
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67 >chr1:6090845-609104 11 ATTGTAATTA 0.773071 87 +
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68 >chr1:8851545-885174 36 TTTTGACTTA 0.771928 49 -
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69 >chr1:6878570-687877 25 ATTACAATCA 0.769475 34 -
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70 >chr1:6090845-609104 11 GTTAAAATGA 0.766922 148 -
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71 >chr1:4662531-466273 5 GTTTTACTCA 0.764511 34 -
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72 >chr1:4562216-456241 4 GTTGAAATCA 0.763465 145 -
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73 >chr1:6090845-609104 11 ATTACAATAA 0.761859 85 -
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74 >chr1:9013525-901372 37 GTTTAAGTAA 0.760027 162 +
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75 >chr1:6205539-620573 13 GTTAAAATTT 0.7594 156 +
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76 >chr1:7413722-741392 32 TTTTCATTGA 0.758428 125 -
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77 >chr1:9932599-993279 45 GTTTGATTAA 0.754251 45 -
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78 >chr1:6588721-658892 21 TTATCAATAA 0.749598 145 +
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79 >chr1:6205539-620573 13 GTATAAATTT 0.747207 160 -
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80 >chr1:4774948-477514 6 TTTACAATTC 0.74652 118 -
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81 >chr1:4833767-483396 7 GGTTAAATCA 0.745976 183 +
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82 >chr1:6588721-658892 21 ATTACAACTA 0.742438 136 -
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83 >chr1:9948240-994844 47 GTTGAAACTA 0.736427 111 +
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84 >chr1:4833767-483396 7 ATTACAAGTA 0.736066 103 -
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85 >chr1:9574131-957433 42 ATTACCATTA 0.734492 157 -
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86 >chr1:6721868-672206 23 AATTCAGTTA 0.728969 72 +
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87 >chr1:4774948-477514 6 GATCTAATTA 0.726685 11 -
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88 >chr1:6266967-626716 15 ATTTCAACTC 0.724842 175 +
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89 >chr1:4833767-483396 7 GTAACGATTA 0.698174 62 -
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90 **********
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91
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92 2) CATTTTAA (TTAAAATG) 2.082
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93
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94 Matrix: MAT2 CATTTTAA
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95 A 0.216 0.8128 0.1075 0.04678 0.1112 0.1399 0.7346 0.7969
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96 C 0.5444 0.04193 0.0509 0.03932 0.0429 0.08711 0.1099 0.09147
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97 G 0.1067 0.03289 0.07156 0.0785 0.0966 0.09202 0.05706 0.0382
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98 T 0.1328 0.1124 0.77 0.8354 0.7493 0.681 0.09836 0.0734
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99
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100 OCCURRENCES:
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101 >chr1:9813405-981360 44 CATTTTAA 1 131 -
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102 >chr1:7768736-776893 34 CATTTTAA 1 134 -
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103 >chr1:7388801-738900 31 CATTTTAA 1 62 +
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104 >chr1:6205539-620573 13 CATTTTAA 1 28 -
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105 >chr1:6090845-609104 11 CATTTTAA 1 149 +
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106 >chr1:3467418-346761 1 CATTTTAA 1 182 +
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107 >chr1:9942670-994287 46 AATTTTAA 0.939956 134 -
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108 >chr1:9013525-901372 37 AATTTTAA 0.939956 112 -
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109 >chr1:6205539-620573 13 AATTTTAA 0.939956 157 -
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110 >chr1:8851545-885174 36 TATTTTAA 0.924741 103 -
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111 >chr1:6262414-626261 14 TATTTTAA 0.924741 183 +
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112 >chr1:7386917-738711 29 GATTTTAA 0.919973 30 -
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113 >chr1:6266967-626716 15 GATTTTAA 0.919973 2 -
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114 >chr1:5072821-507302 8 GATTTTAA 0.919973 114 -
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115 >chr1:7444756-744495 33 CATTTAAA 0.901069 100 -
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116 >chr1:9932599-993279 45 CATTTGAA 0.892317 175 -
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117 >chr1:6266967-626716 15 CATTTCAA 0.891418 174 +
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118 >chr1:6750817-675101 24 CATTTTCA 0.885779 154 -
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119 >chr1:6090845-609104 11 CATTTTCA 0.885779 5 +
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120 >chr1:5168670-516887 9 CATTTTCA 0.885779 26 -
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121 >chr1:6360131-636033 17 CATTTTTA 0.883664 135 +
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122 >chr1:9948240-994844 47 CATTATAA 0.883344 56 -
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123 >chr1:5805347-580554 10 CATTGTAA 0.880668 126 -
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124 >chr1:9948240-994844 47 CAATTTAA 0.878877 16 +
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125 >chr1:9942670-994287 46 CAATTTAA 0.878877 130 +
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126 >chr1:6090845-609104 11 CAATTTAA 0.878877 122 +
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127 >chr1:6396504-639670 18 CATTTTGA 0.876113 175 +
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128 >chr1:9013525-901372 37 CAGTTTAA 0.872299 108 +
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129 >chr1:6266967-626716 15 CTTTTTAA 0.871938 44 -
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130 >chr1:6262414-626261 14 CTTTTTAA 0.871938 187 -
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131 >chr1:6090845-609104 11 CTTTTTAA 0.871938 171 -
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132 >chr1:4774948-477514 6 CATTCTAA 0.870849 60 +
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133 >chr1:6090845-609104 11 CACTTTAA 0.868521 126 -
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134 >chr1:8797248-879744 35 CATTTTAT 0.867711 146 -
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135 >chr1:4024990-402519 2 CATTTTAG 0.861275 117 -
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136 >chr1:8851545-885174 36 AATTTGAA 0.832272 183 -
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137 >chr1:5805347-580554 10 AATTTGAA 0.832272 179 +
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138 >chr1:9956513-995671 48 AATTTCAA 0.831373 180 -
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139 >chr1:6588721-658892 21 AATTTCAA 0.831373 101 -
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140 >chr1:3467418-346761 1 AATTTTCA 0.825735 191 -
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141 >chr1:7386917-738711 29 AATTGTAA 0.820624 46 -
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142 >chr1:4774948-477514 6 AATTGTAA 0.820624 119 +
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143 >chr1:9956513-995671 48 AATTTTAC 0.810972 184 +
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144 >chr1:7413722-741392 32 AATTTTAC 0.810972 10 +
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145 >chr1:6472202-647240 20 AATTTTAC 0.810972 32 +
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146 >chr1:6090845-609104 11 TATTGTAA 0.805409 86 +
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147 >chr1:9554705-955490 40 AATGTTAA 0.801568 46 +
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148 >chr1:8851545-885174 36 AATGTTAA 0.801568 99 +
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149 >chr1:6878570-687877 25 GATTGTAA 0.800641 35 +
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150 >chr1:7444756-744495 33 CATTATAC 0.75436 70 -
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151 **********
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152
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153 3) GTGAATTA (TAATTCAC) 1.969
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154
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155 Matrix: MAT3 GTGAATTA
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156 A 0.2434 0.0588 0.09038 0.7708 0.7064 0.0692 0.08129 0.7448
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157 C 0.08343 0.02873 0.1008 0.06039 0.0821 0.07782 0.09324 0.09242
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158 G 0.5181 0.06202 0.6983 0.08538 0.05523 0.08203 0.1107 0.09517
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159 T 0.1551 0.8504 0.1106 0.08347 0.1562 0.7709 0.7148 0.0676
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160
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161 OCCURRENCES:
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162 >chr1:6266967-626716 15 GTGAATTA 1 15 +
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163 >chr1:8851545-885174 36 ATGAATTA 0.94756 84 -
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164 >chr1:6437830-643803 19 ATGAATTA 0.94756 128 -
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165 >chr1:5072821-507302 8 TTGAATTA 0.930703 153 -
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166 >chr1:6878570-687877 25 CTGAATTA 0.917022 85 +
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167 >chr1:6721868-672206 23 CTGAATTA 0.917022 71 -
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168 >chr1:9568576-956877 41 GTGATTTA 0.89497 22 +
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169 >chr1:4833767-483396 7 GTGATTTA 0.89497 186 -
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170 >chr1:6262414-626261 14 GTGAATGA 0.884673 174 +
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171 >chr1:4402453-440265 3 GTGAATCA 0.881343 131 -
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172 >chr1:6437830-643803 19 GTGAATAA 0.879062 123 +
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173 >chr1:9956513-995671 48 GTGAATTG 0.875981 77 -
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174 >chr1:6878570-687877 25 GTGAATTG 0.875981 53 +
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175 >chr1:6277750-627795 16 GTGAATTC 0.875456 27 -
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176 >chr1:7768736-776893 34 GTGGATTA 0.86916 11 +
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177 >chr1:6721868-672206 23 GTGGATTA 0.86916 168 +
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178 >chr1:3467418-346761 1 GTGTATTA 0.868795 4 -
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179 >chr1:7209035-720923 26 GTGAAGTA 0.868484 12 -
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180 >chr1:6183701-618390 12 GTGAACTA 0.867682 60 +
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181 >chr1:4024990-402519 2 GTGAACTA 0.867682 97 -
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182 >chr1:6396504-639670 18 GGGAATTA 0.849489 51 +
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183 >chr1:7768736-776893 34 ATTAATTA 0.835366 129 +
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184 >chr1:9978791-997899 50 ATAAATTA 0.831511 27 +
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185 >chr1:7768736-776893 34 ATAAATTA 0.831511 104 +
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186 >chr1:6183701-618390 12 ATGAATCA 0.828904 71 +
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187 >chr1:5072821-507302 8 ATGAATCA 0.828904 85 -
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188 >chr1:9932599-993279 45 ATGACTTA 0.828376 12 -
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189 >chr1:9574131-957433 42 ATGACTTA 0.828376 55 +
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190 >chr1:5072821-507302 8 ATGAATAA 0.826623 21 +
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191 >chr1:9574131-957433 42 TTGATTTA 0.825673 145 -
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192 >chr1:8797248-879744 35 TTGATTTA 0.825673 7 +
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193 >chr1:8797248-879744 35 TTCAATTA 0.816637 176 +
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194 >chr1:3467418-346761 1 TTCAATTA 0.816637 187 -
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195 >chr1:7768736-776893 34 ATGTATTA 0.816356 125 +
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196 >chr1:5072821-507302 8 ATGTATTA 0.816356 42 +
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197 >chr1:3467418-346761 1 ATGTATTA 0.816356 26 -
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198 >chr1:9568576-956877 41 ATGAAGTA 0.816044 150 +
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199 >chr1:6721868-672206 23 TTGAATGA 0.815376 85 +
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200 >chr1:7209035-720923 26 ATGAACTA 0.815242 42 +
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201 >chr1:6878570-687877 25 ATGCATTA 0.81195 43 -
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202 >chr1:8851545-885174 36 TTGACTTA 0.811518 49 -
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203 >chr1:9942670-994287 46 TTGAATTG 0.806684 162 +
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204 >chr1:6090845-609104 11 TTGCATTA 0.795092 39 +
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205 >chr1:6719561-671976 22 ACGAATTA 0.790695 71 -
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206 >chr1:9942670-994287 46 GTCATTTA 0.780905 11 -
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207 >chr1:6472202-647240 20 GTCATTTA 0.780905 144 +
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208 >chr1:9956513-995671 48 GTGATTGA 0.779643 176 +
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209 >chr1:9932599-993279 45 GTGATTGA 0.779643 127 -
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210 >chr1:4774948-477514 6 GTGATCTA 0.762652 15 -
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211 >chr1:6205539-620573 13 GTCTATTA 0.75473 143 +
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212 **********
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213
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214 4) TCAATCAT (ATGATTGA) 1.944
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215
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216 Matrix: MAT4 TCAATCAT
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217 A 0.05132 0.186 0.8183 0.6756 0.1425 0.08545 0.8726 0.1838
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218 C 0.02852 0.5378 0.07891 0.05957 0.02786 0.6724 0.03639 0.1337
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219 G 0.0695 0.1008 0.02175 0.09712 0.07326 0.07966 0.0383 0.06208
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220 T 0.8507 0.1753 0.08099 0.1677 0.7564 0.1625 0.05268 0.6204
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221
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222 OCCURRENCES:
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223 >chr1:8851545-885174 36 TCAATCAT 1 120 +
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224 >chr1:7444756-744495 33 TCAATCAT 1 11 +
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225 >chr1:9013525-901372 37 TTAATCAT 0.932721 174 +
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226 >chr1:6090845-609104 11 TTAATCAT 0.932721 167 -
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227 >chr1:4774948-477514 6 TTAATCAT 0.932721 139 -
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228 >chr1:4833767-483396 7 TCAATCAA 0.918952 128 -
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229 >chr1:5072821-507302 8 TGAATCAT 0.918887 84 -
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230 >chr1:9956513-995671 48 TCAATCAC 0.909665 176 -
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231 >chr1:9932599-993279 45 TCAATCAC 0.909665 127 +
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232 >chr1:9574131-957433 42 TCATTCAT 0.90572 83 -
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233 >chr1:7303541-730374 27 TCATTCAT 0.90572 107 -
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234 >chr1:8797248-879744 35 TCAATTAT 0.905366 177 +
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235 >chr1:7388025-738822 30 TCAATCAG 0.896366 4 +
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236 >chr1:7444756-744495 33 TCAAACAT 0.886061 130 -
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237 >chr1:6472202-647240 20 TCACTCAT 0.885652 20 -
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238 >chr1:8797248-879744 35 TCTATCAT 0.863139 56 +
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239 >chr1:6277750-627795 16 TCTATCAT 0.863139 95 +
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240 >chr1:9574131-957433 42 TCCATCAT 0.862751 116 +
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241 >chr1:6266967-626716 15 TCCATCAT 0.862751 112 -
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242 >chr1:9574131-957433 42 TAAATCAA 0.853657 145 +
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243 >chr1:8797248-879744 35 TAAATCAA 0.853657 7 -
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244 >chr1:9932599-993279 45 TTAATCAA 0.851673 45 +
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245 >chr1:6878570-687877 25 TTAATCAA 0.851673 90 +
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246 >chr1:7386917-738711 29 TCAATCCT 0.844783 2 +
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247 >chr1:9568576-956877 41 TAAATCAC 0.84437 22 -
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248 >chr1:4833767-483396 7 TAAATCAC 0.84437 186 +
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249 >chr1:8851545-885174 36 TAATTCAT 0.840425 84 +
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250 >chr1:6437830-643803 19 TAATTCAT 0.840425 128 +
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251 >chr1:9962925-996312 49 TAAATTAT 0.84007 189 -
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252 >chr1:7768736-776893 34 TAAATTAT 0.84007 105 +
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253 >chr1:7303541-730374 27 TTATTCAT 0.838441 169 +
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254 >chr1:5072821-507302 8 TTATTCAT 0.838441 21 -
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|
255 >chr1:4402453-440265 3 TGAATCAA 0.837839 130 -
|
|
|
256 >chr1:9932599-993279 45 TAAGTCAT 0.827328 12 +
|
|
|
257 >chr1:9574131-957433 42 TAAGTCAT 0.827328 55 -
|
|
|
258 >chr1:6721868-672206 23 TCATTCAA 0.824672 85 -
|
|
|
259 >chr1:6183701-618390 12 TGATTCAT 0.824607 71 -
|
|
|
260 >chr1:5072821-507302 8 TGATTCAT 0.824607 85 +
|
|
|
261 >chr1:3467418-346761 1 TCAATTAA 0.824318 186 -
|
|
|
262 >chr1:6437830-643803 19 TGAATTAT 0.824253 127 -
|
|
|
263 >chr1:6266967-626716 15 TGAATTAT 0.824253 16 +
|
|
|
264 >chr1:4024990-402519 2 TAAAACAT 0.820765 82 +
|
|
|
265 >chr1:9942670-994287 46 TTAAACAT 0.818782 80 +
|
|
|
266 >chr1:6360131-636033 17 TTAAACAT 0.818782 143 +
|
|
|
267 >chr1:5072821-507302 8 TTAAACAT 0.818782 148 -
|
|
|
268 >chr1:6588721-658892 21 TCAATAAC 0.800726 148 +
|
|
|
269 >chr1:6262414-626261 14 TCAGTTAT 0.797989 137 +
|
|
|
270 >chr1:6205539-620573 13 TCTATCAA 0.782091 96 -
|
|
|
271 >chr1:4662531-466273 5 TAAATCGT 0.779842 56 +
|
|
|
272 >chr1:4833767-483396 7 TTAATCGT 0.777858 61 +
|
|
|
273 **********
|
|
|
274
|
|
|
275 5) TGTTTAAT (ATTAAACA) 1.874
|
|
|
276
|
|
|
277 Matrix: MAT5 TGTTTAAT
|
|
|
278 A 0.1111 0.09112 0.1881 0.1074 0.1057 0.6769 0.7668 0.1993
|
|
|
279 C 0.02537 0.03582 0.06521 0.08013 0.08927 0.09377 0.03432 0.08804
|
|
|
280 G 0.07262 0.7214 0.06612 0.05896 0.07036 0.1072 0.116 0.09061
|
|
|
281 T 0.7909 0.1516 0.6806 0.7536 0.7347 0.1221 0.08288 0.6221
|
|
|
282
|
|
|
283 OCCURRENCES:
|
|
|
284 >chr1:6360131-636033 17 TGTTTAAT 1 142 -
|
|
|
285 >chr1:5072821-507302 8 TGTTTAAT 1 149 +
|
|
|
286 >chr1:9942670-994287 46 TGTTTAAA 0.919846 79 -
|
|
|
287 >chr1:6878570-687877 25 TGATTAAT 0.906643 89 -
|
|
|
288 >chr1:4774948-477514 6 TGATTAAT 0.906643 140 +
|
|
|
289 >chr1:9013525-901372 37 TGTTTAAG 0.899248 161 +
|
|
|
290 >chr1:6360131-636033 17 TGTTTAAG 0.899248 6 +
|
|
|
291 >chr1:5805347-580554 10 TGTTTAAC 0.898761 16 -
|
|
|
292 >chr1:9978791-997899 50 TGTTTGAT 0.892015 68 +
|
|
|
293 >chr1:6396504-639670 18 TGTTTGAT 0.892015 10 -
|
|
|
294 >chr1:4562216-456241 4 TGTTTGAT 0.892015 141 +
|
|
|
295 >chr1:6396504-639670 18 TTTTTAAT 0.891988 59 +
|
|
|
296 >chr1:6090845-609104 11 TTTTTAAT 0.891988 170 -
|
|
|
297 >chr1:9460371-946057 38 TGTTTCAT 0.889461 121 -
|
|
|
298 >chr1:9568576-956877 41 TGTTCAAT 0.877642 144 +
|
|
|
299 >chr1:7388801-738900 31 TGTTTAGT 0.876624 88 -
|
|
|
300 >chr1:6719561-671976 22 TGTCTAAT 0.872337 67 +
|
|
|
301 >chr1:6090845-609104 11 TGATTAAA 0.826489 168 +
|
|
|
302 >chr1:7444756-744495 33 TGTTTGAA 0.811861 131 +
|
|
|
303 >chr1:5072821-507302 8 TGTTTGAA 0.811861 156 -
|
|
|
304 >chr1:9932599-993279 45 TGTTTCAA 0.809307 123 +
|
|
|
305 >chr1:8797248-879744 35 TGTTTCAA 0.809307 173 +
|
|
|
306 >chr1:6396504-639670 18 TGTTTCAA 0.809307 179 -
|
|
|
307 >chr1:9932599-993279 45 TGATTAAC 0.805404 44 -
|
|
|
308 >chr1:9013525-901372 37 TGATTAAC 0.805404 173 -
|
|
|
309 >chr1:9574131-957433 42 TGATTTAT 0.801481 144 -
|
|
|
310 >chr1:9568576-956877 41 TGATTTAT 0.801481 23 +
|
|
|
311 >chr1:8797248-879744 35 TGATTTAT 0.801481 8 +
|
|
|
312 >chr1:8851545-885174 36 TGATTGAT 0.798658 119 -
|
|
|
313 >chr1:4833767-483396 7 TGATTGAT 0.798658 129 +
|
|
|
314 >chr1:9948240-994844 47 TGTATAAA 0.797343 126 +
|
|
|
315 >chr1:6205539-620573 13 TGTATAAA 0.797343 163 -
|
|
|
316 >chr1:9932599-993279 45 TGTTTAGA 0.79647 148 +
|
|
|
317 >chr1:4562216-456241 4 TGTTTAGA 0.79647 165 -
|
|
|
318 >chr1:6183701-618390 12 TGATTCAT 0.796104 71 -
|
|
|
319 >chr1:5072821-507302 8 TGATTCAT 0.796104 85 +
|
|
|
320 >chr1:9948240-994844 47 TGTTTATA 0.790191 128 -
|
|
|
321 >chr1:9978791-997899 50 TGATAAAT 0.787394 72 +
|
|
|
322 >chr1:6437830-643803 19 TGAATAAT 0.78414 124 +
|
|
|
323 >chr1:4024990-402519 2 TGATTATT 0.776988 186 +
|
|
|
324 >chr1:6183701-618390 12 TGTATAAC 0.776258 8 -
|
|
|
325 >chr1:6878570-687877 25 TGTTCTAT 0.77248 74 +
|
|
|
326 >chr1:3467418-346761 1 TGTATTAT 0.772335 25 -
|
|
|
327 >chr1:3467418-346761 1 TGTATTAT 0.772335 3 -
|
|
|
328 >chr1:7413722-741392 32 AGTTTAAC 0.769901 187 +
|
|
|
329 >chr1:9574131-957433 42 TGTATGAT 0.769512 119 -
|
|
|
330 >chr1:9568576-956877 41 TGTATAGT 0.754121 107 +
|
|
|
331 >chr1:7444756-744495 33 AGTATAAT 0.748637 69 +
|
|
|
332 >chr1:6090845-609104 11 AGTATAAT 0.748637 93 -
|
|
|
333 >chr1:6721868-672206 23 GGTATAAT 0.741335 124 -
|
|
|
334 **********
|
|
|
335
|
|
|
336 6) ATTACT (AGTAAT) 1.823
|
|
|
337
|
|
|
338 Matrix: MAT6 ATTACT
|
|
|
339 A 0.8781 0.0835 0.07038 0.7901 0.03473 0.1075
|
|
|
340 C 0.04152 0.05455 0.05837 0.03709 0.7755 0.04605
|
|
|
341 G 0.0322 0.01277 0.1088 0.07223 0.04238 0.01572
|
|
|
342 T 0.04814 0.8492 0.7624 0.1005 0.1473 0.8308
|
|
|
343
|
|
|
344 OCCURRENCES:
|
|
|
345 >chr1:9978791-997899 50 ATTACT 1 31 +
|
|
|
346 >chr1:9568576-956877 41 ATTACT 1 154 -
|
|
|
347 >chr1:9013525-901372 37 ATTACT 1 183 -
|
|
|
348 >chr1:7209035-720923 26 ATTACT 1 183 +
|
|
|
349 >chr1:6878570-687877 25 ATTACT 1 64 -
|
|
|
350 >chr1:6719561-671976 22 ATTACT 1 137 +
|
|
|
351 >chr1:6588721-658892 21 ATTACT 1 9 -
|
|
|
352 >chr1:6472202-647240 20 ATTACT 1 176 -
|
|
|
353 >chr1:6472202-647240 20 ATTACT 1 29 -
|
|
|
354 >chr1:6360131-636033 17 ATTACT 1 86 +
|
|
|
355 >chr1:6262414-626261 14 ATTACT 1 160 +
|
|
|
356 >chr1:6090845-609104 11 ATTACT 1 20 -
|
|
|
357 >chr1:5805347-580554 10 ATTACT 1 176 -
|
|
|
358 >chr1:5072821-507302 8 ATTACT 1 46 +
|
|
|
359 >chr1:4774948-477514 6 ATTACT 1 194 -
|
|
|
360 >chr1:3467418-346761 1 ATTACT 1 32 +
|
|
|
361 >chr1:9962925-996312 49 ATTATT 0.866209 188 -
|
|
|
362 >chr1:9962925-996312 49 ATTATT 0.866209 133 +
|
|
|
363 >chr1:9942670-994287 46 ATTATT 0.866209 73 +
|
|
|
364 >chr1:8797248-879744 35 ATTATT 0.866209 192 +
|
|
|
365 >chr1:6878570-687877 25 ATTATT 0.866209 41 -
|
|
|
366 >chr1:6719561-671976 22 ATTATT 0.866209 181 -
|
|
|
367 >chr1:6719561-671976 22 ATTATT 0.866209 145 -
|
|
|
368 >chr1:6472202-647240 20 ATTATT 0.866209 5 +
|
|
|
369 >chr1:6437830-643803 19 ATTATT 0.866209 126 -
|
|
|
370 >chr1:6396504-639670 18 ATTATT 0.866209 55 +
|
|
|
371 >chr1:6090845-609104 11 ATTATT 0.866209 84 +
|
|
|
372 >chr1:6090845-609104 11 ATTATT 0.866209 43 +
|
|
|
373 >chr1:5805347-580554 10 ATTATT 0.866209 65 -
|
|
|
374 >chr1:4024990-402519 2 ATTATT 0.866209 188 +
|
|
|
375 >chr1:3467418-346761 1 ATTATT 0.866209 24 -
|
|
|
376 >chr1:9942670-994287 46 ATGACT 0.860789 34 +
|
|
|
377 >chr1:9932599-993279 45 ATGACT 0.860789 14 -
|
|
|
378 >chr1:9574131-957433 42 ATGACT 0.860789 55 +
|
|
|
379 >chr1:9013525-901372 37 ATGACT 0.860789 193 +
|
|
|
380 >chr1:7768736-776893 34 ATGACT 0.860789 121 -
|
|
|
381 >chr1:7444756-744495 33 ATGACT 0.860789 194 -
|
|
|
382 >chr1:7444756-744495 33 ATGACT 0.860789 40 -
|
|
|
383 >chr1:7303541-730374 27 ATGACT 0.860789 111 +
|
|
|
384 >chr1:6472202-647240 20 ATGACT 0.860789 143 -
|
|
|
385 >chr1:6183701-618390 12 ATGACT 0.860789 175 -
|
|
|
386 >chr1:4662531-466273 5 ATGACT 0.860789 126 +
|
|
|
387 >chr1:6878570-687877 25 ATTACA 0.845949 38 -
|
|
|
388 >chr1:6719561-671976 22 ATTACA 0.845949 127 +
|
|
|
389 >chr1:6588721-658892 21 ATTACA 0.845949 140 -
|
|
|
390 >chr1:6090845-609104 11 ATTACA 0.845949 89 -
|
|
|
391 >chr1:5805347-580554 10 ATTACA 0.845949 147 +
|
|
|
392 >chr1:5805347-580554 10 ATTACA 0.845949 125 +
|
|
|
393 >chr1:4833767-483396 7 ATTACA 0.845949 107 -
|
|
|
394 >chr1:4774948-477514 6 ATTACA 0.845949 9 -
|
|
|
395 **********
|
|
|
396
|
|
|
397 7) TCACAT (ATGTGA) 1.8
|
|
|
398
|
|
|
399 Matrix: MAT7 TCACAT
|
|
|
400 A 0.08233 0.1013 0.9032 0.139 0.8283 0.0876
|
|
|
401 C 0.04274 0.7009 0.02867 0.7396 0.0355 0.04803
|
|
|
402 G 0.04677 0.1109 0.01307 0.0554 0.0163 0.05845
|
|
|
403 T 0.8282 0.08693 0.05509 0.06599 0.1199 0.8059
|
|
|
404
|
|
|
405 OCCURRENCES:
|
|
|
406 >chr1:9956513-995671 48 TCACAT 1 18 +
|
|
|
407 >chr1:9813405-981360 44 TCACAT 1 66 -
|
|
|
408 >chr1:9568576-956877 41 TCACAT 1 33 +
|
|
|
409 >chr1:8797248-879744 35 TCACAT 1 32 +
|
|
|
410 >chr1:7303541-730374 27 TCACAT 1 80 +
|
|
|
411 >chr1:7209035-720923 26 TCACAT 1 127 -
|
|
|
412 >chr1:6878570-687877 25 TCACAT 1 101 +
|
|
|
413 >chr1:6878570-687877 25 TCACAT 1 51 -
|
|
|
414 >chr1:6588721-658892 21 TCACAT 1 22 -
|
|
|
415 >chr1:6472202-647240 20 TCACAT 1 74 -
|
|
|
416 >chr1:6277750-627795 16 TCACAT 1 31 +
|
|
|
417 >chr1:6266967-626716 15 TCACAT 1 171 +
|
|
|
418 >chr1:6205539-620573 13 TCACAT 1 33 -
|
|
|
419 >chr1:5805347-580554 10 TCACAT 1 131 -
|
|
|
420 >chr1:4774948-477514 6 TCACAT 1 132 -
|
|
|
421 >chr1:4774948-477514 6 TCACAT 1 19 +
|
|
|
422 >chr1:4662531-466273 5 TCACAT 1 31 -
|
|
|
423 >chr1:4402453-440265 3 TCACAT 1 135 +
|
|
|
424 >chr1:4024990-402519 2 TCACAT 1 66 -
|
|
|
425 >chr1:3467418-346761 1 TCACAT 1 79 +
|
|
|
426 >chr1:3467418-346761 1 TCACAT 1 53 +
|
|
|
427 >chr1:9978791-997899 50 TGACAT 0.870153 84 -
|
|
|
428 >chr1:9942670-994287 46 TGACAT 0.870153 93 +
|
|
|
429 >chr1:9574131-957433 42 TGACAT 0.870153 111 +
|
|
|
430 >chr1:9554705-955490 40 TGACAT 0.870153 53 -
|
|
|
431 >chr1:7303541-730374 27 TGACAT 0.870153 99 +
|
|
|
432 >chr1:7209035-720923 26 TGACAT 0.870153 121 -
|
|
|
433 >chr1:6878570-687877 25 TGACAT 0.870153 69 +
|
|
|
434 >chr1:6437830-643803 19 TGACAT 0.870153 6 -
|
|
|
435 >chr1:6183701-618390 12 TGACAT 0.870153 140 +
|
|
|
436 >chr1:4833767-483396 7 TGACAT 0.870153 29 -
|
|
|
437 >chr1:9956513-995671 48 TAACAT 0.868041 137 +
|
|
|
438 >chr1:9574131-957433 42 TAACAT 0.868041 104 -
|
|
|
439 >chr1:9554705-955490 40 TAACAT 0.868041 47 -
|
|
|
440 >chr1:8851545-885174 36 TAACAT 0.868041 100 -
|
|
|
441 >chr1:8797248-879744 35 TAACAT 0.868041 103 +
|
|
|
442 >chr1:7768736-776893 34 TAACAT 0.868041 80 -
|
|
|
443 >chr1:6090845-609104 11 TAACAT 0.868041 154 +
|
|
|
444 >chr1:9962925-996312 49 TCAAAT 0.867804 40 -
|
|
|
445 >chr1:9932599-993279 45 TCAAAT 0.867804 176 +
|
|
|
446 >chr1:9813405-981360 44 TCAAAT 0.867804 55 +
|
|
|
447 >chr1:8851545-885174 36 TCAAAT 0.867804 188 -
|
|
|
448 >chr1:8851545-885174 36 TCAAAT 0.867804 184 +
|
|
|
449 >chr1:8851545-885174 36 TCAAAT 0.867804 96 +
|
|
|
450 >chr1:6719561-671976 22 TCAAAT 0.867804 142 +
|
|
|
451 >chr1:5805347-580554 10 TCAAAT 0.867804 180 -
|
|
|
452 >chr1:5805347-580554 10 TCAAAT 0.867804 121 +
|
|
|
453 >chr1:4833767-483396 7 TCAAAT 0.867804 126 -
|
|
|
454 >chr1:4833767-483396 7 TCAAAT 0.867804 25 +
|
|
|
455 >chr1:4774948-477514 6 TTACAT 0.864876 8 -
|
|
|
456 **********
|
|
|
457
|
|
|
458 8) TACATT (AATGTA) 1.773
|
|
|
459
|
|
|
460 Matrix: MAT8 TACATT
|
|
|
461 A 0.09867 0.7322 0.1194 0.8806 0.101 0.09423
|
|
|
462 C 0.1068 0.06715 0.743 0.03825 0.03645 0.02894
|
|
|
463 G 0.1046 0.07625 0.0467 0.01049 0.07555 0.07099
|
|
|
464 T 0.6899 0.1244 0.09086 0.07061 0.7871 0.8058
|
|
|
465
|
|
|
466 OCCURRENCES:
|
|
|
467 >chr1:9962925-996312 49 TACATT 1 130 +
|
|
|
468 >chr1:9942670-994287 46 TACATT 1 158 +
|
|
|
469 >chr1:9932599-993279 45 TACATT 1 105 -
|
|
|
470 >chr1:9460371-946057 38 TACATT 1 173 +
|
|
|
471 >chr1:9013525-901372 37 TACATT 1 59 +
|
|
|
472 >chr1:6721868-672206 23 TACATT 1 46 +
|
|
|
473 >chr1:6588721-658892 21 TACATT 1 160 -
|
|
|
474 >chr1:6472202-647240 20 TACATT 1 92 -
|
|
|
475 >chr1:6396504-639670 18 TACATT 1 64 -
|
|
|
476 >chr1:6205539-620573 13 TACATT 1 167 +
|
|
|
477 >chr1:4024990-402519 2 TACATT 1 121 -
|
|
|
478 >chr1:3467418-346761 1 TACATT 1 29 +
|
|
|
479 >chr1:4662531-466273 5 CACATT 0.865945 30 -
|
|
|
480 >chr1:4024990-402519 2 CACATT 0.865945 65 -
|
|
|
481 >chr1:3467418-346761 1 CACATT 0.865945 54 +
|
|
|
482 >chr1:9942670-994287 46 GACATT 0.865452 94 +
|
|
|
483 >chr1:9554705-955490 40 GACATT 0.865452 52 -
|
|
|
484 >chr1:7388801-738900 31 GACATT 0.865452 176 -
|
|
|
485 >chr1:7303541-730374 27 GACATT 0.865452 100 +
|
|
|
486 >chr1:6437830-643803 19 GACATT 0.865452 84 -
|
|
|
487 >chr1:6437830-643803 19 GACATT 0.865452 5 -
|
|
|
488 >chr1:6205539-620573 13 GACATT 0.865452 114 +
|
|
|
489 >chr1:6183701-618390 12 GACATT 0.865452 83 +
|
|
|
490 >chr1:4833767-483396 7 GACATT 0.865452 28 -
|
|
|
491 >chr1:4562216-456241 4 GACATT 0.865452 157 +
|
|
|
492 >chr1:9978791-997899 50 TAAATT 0.856652 28 +
|
|
|
493 >chr1:9962925-996312 49 TAAATT 0.856652 191 -
|
|
|
494 >chr1:9948240-994844 47 TAAATT 0.856652 17 -
|
|
|
495 >chr1:9942670-994287 46 TAAATT 0.856652 131 -
|
|
|
496 >chr1:9813405-981360 44 TAAATT 0.856652 144 +
|
|
|
497 >chr1:7768736-776893 34 TAAATT 0.856652 105 +
|
|
|
498 >chr1:6205539-620573 13 TAAATT 0.856652 161 -
|
|
|
499 >chr1:6090845-609104 11 TAAATT 0.856652 123 -
|
|
|
500 >chr1:4774948-477514 6 TAAATT 0.856652 73 +
|
|
|
501 >chr1:9956513-995671 48 TATATT 0.85009 155 +
|
|
|
502 >chr1:9942670-994287 46 TATATT 0.85009 119 +
|
|
|
503 >chr1:9813405-981360 44 TATATT 0.85009 31 -
|
|
|
504 >chr1:9013525-901372 37 TATATT 0.85009 78 -
|
|
|
505 >chr1:7768736-776893 34 TATATT 0.85009 2 -
|
|
|
506 >chr1:7413722-741392 32 TATATT 0.85009 87 +
|
|
|
507 >chr1:7413722-741392 32 TATATT 0.85009 85 -
|
|
|
508 >chr1:6472202-647240 20 TATATT 0.85009 2 +
|
|
|
509 >chr1:6360131-636033 17 TATATT 0.85009 26 -
|
|
|
510 >chr1:9813405-981360 44 TACAAT 0.842287 28 +
|
|
|
511 >chr1:9535189-953538 39 TACAAT 0.842287 43 +
|
|
|
512 >chr1:7386917-738711 29 TACAAT 0.842287 47 +
|
|
|
513 >chr1:6878570-687877 25 TACAAT 0.842287 36 -
|
|
|
514 >chr1:6090845-609104 11 TACAAT 0.842287 87 -
|
|
|
515 >chr1:5805347-580554 10 TACAAT 0.842287 127 +
|
|
|
516 >chr1:4774948-477514 6 TACAAT 0.842287 120 -
|
|
|
517 **********
|
|
|
518
|
|
|
519 9) TTGACA (TGTCAA) 1.733
|
|
|
520
|
|
|
521 Matrix: MAT9 TTGACA
|
|
|
522 A 0.1287 0.06713 0.09732 0.8048 0.1278 0.8784
|
|
|
523 C 0.07599 0.01615 0.136 0.02754 0.7339 0.02517
|
|
|
524 G 0.07764 0.03641 0.6902 0.03821 0.05137 0.01588
|
|
|
525 T 0.7176 0.8803 0.0764 0.1295 0.08697 0.0806
|
|
|
526
|
|
|
527 OCCURRENCES:
|
|
|
528 >chr1:9942670-994287 46 TTGACA 1 92 +
|
|
|
529 >chr1:8851545-885174 36 TTGACA 1 190 +
|
|
|
530 >chr1:8797248-879744 35 TTGACA 1 125 -
|
|
|
531 >chr1:7768736-776893 34 TTGACA 1 75 -
|
|
|
532 >chr1:7444756-744495 33 TTGACA 1 9 -
|
|
|
533 >chr1:7209035-720923 26 TTGACA 1 122 -
|
|
|
534 >chr1:6437830-643803 19 TTGACA 1 7 -
|
|
|
535 >chr1:6205539-620573 13 TTGACA 1 136 +
|
|
|
536 >chr1:6090845-609104 11 TTGACA 1 181 +
|
|
|
537 >chr1:5805347-580554 10 TTGACA 1 119 -
|
|
|
538 >chr1:4833767-483396 7 TTGACA 1 30 -
|
|
|
539 >chr1:4024990-402519 2 TTGACA 1 21 +
|
|
|
540 >chr1:6719561-671976 22 TTCACA 0.875237 86 -
|
|
|
541 >chr1:6437830-643803 19 TTCACA 0.875237 122 -
|
|
|
542 >chr1:6277750-627795 16 TTCACA 0.875237 30 +
|
|
|
543 >chr1:6266967-626716 15 TTCACA 0.875237 170 +
|
|
|
544 >chr1:6262414-626261 14 TTCACA 0.875237 59 +
|
|
|
545 >chr1:6090845-609104 11 TTCACA 0.875237 30 +
|
|
|
546 >chr1:5805347-580554 10 TTCACA 0.875237 132 -
|
|
|
547 >chr1:5805347-580554 10 TTCACA 0.875237 43 +
|
|
|
548 >chr1:5168670-516887 9 TTCACA 0.875237 155 +
|
|
|
549 >chr1:5168670-516887 9 TTCACA 0.875237 24 -
|
|
|
550 >chr1:4774948-477514 6 TTCACA 0.875237 133 -
|
|
|
551 >chr1:4402453-440265 3 TTCACA 0.875237 134 +
|
|
|
552 >chr1:9978791-997899 50 ATGACA 0.867422 85 -
|
|
|
553 >chr1:9956513-995671 48 ATGACA 0.867422 106 +
|
|
|
554 >chr1:9932599-993279 45 ATGACA 0.867422 140 +
|
|
|
555 >chr1:9574131-957433 42 ATGACA 0.867422 179 -
|
|
|
556 >chr1:9574131-957433 42 ATGACA 0.867422 110 +
|
|
|
557 >chr1:7768736-776893 34 ATGACA 0.867422 139 +
|
|
|
558 >chr1:6878570-687877 25 ATGACA 0.867422 68 +
|
|
|
559 >chr1:6360131-636033 17 ATGACA 0.867422 149 +
|
|
|
560 >chr1:6262414-626261 14 ATGACA 0.867422 102 -
|
|
|
561 >chr1:6183701-618390 12 ATGACA 0.867422 108 -
|
|
|
562 >chr1:6183701-618390 12 ATGACA 0.867422 42 +
|
|
|
563 >chr1:6090845-609104 11 ATGACA 0.867422 146 -
|
|
|
564 >chr1:9962925-996312 49 TTAACA 0.866518 121 +
|
|
|
565 >chr1:9932599-993279 45 TTAACA 0.866518 43 -
|
|
|
566 >chr1:9574131-957433 42 TTAACA 0.866518 105 -
|
|
|
567 >chr1:9554705-955490 40 TTAACA 0.866518 48 -
|
|
|
568 >chr1:8851545-885174 36 TTAACA 0.866518 101 -
|
|
|
569 >chr1:6266967-626716 15 TTAACA 0.866518 42 -
|
|
|
570 >chr1:6090845-609104 11 TTAACA 0.866518 153 +
|
|
|
571 >chr1:4024990-402519 2 TTAACA 0.866518 79 -
|
|
|
572 >chr1:9978791-997899 50 TTGATA 0.854356 71 +
|
|
|
573 >chr1:9568576-956877 41 TTGATA 0.854356 190 -
|
|
|
574 >chr1:9460371-946057 38 TTGATA 0.854356 85 -
|
|
|
575 >chr1:6588721-658892 21 TTGATA 0.854356 146 -
|
|
|
576 >chr1:6205539-620573 13 TTGATA 0.854356 96 +
|
|
|
577 >chr1:4833767-483396 7 TTGATA 0.854356 23 -
|
|
|
578 **********
|
|
|
579
|
|
|
580 10) AATAAT (ATTATT) 1.714
|
|
|
581
|
|
|
582 Matrix: MAT10 AATAAT
|
|
|
583 A 0.821 0.7797 0.1145 0.7009 0.8508 0.1043
|
|
|
584 C 0.05975 0.04103 0.05818 0.09164 0.07329 0.07718
|
|
|
585 G 0.05042 0.1458 0.06827 0.08449 0.04593 0.05097
|
|
|
586 T 0.06887 0.03344 0.759 0.1229 0.02993 0.7675
|
|
|
587
|
|
|
588 OCCURRENCES:
|
|
|
589 >chr1:9962925-996312 49 AATAAT 1 188 +
|
|
|
590 >chr1:9962925-996312 49 AATAAT 1 133 -
|
|
|
591 >chr1:9942670-994287 46 AATAAT 1 73 -
|
|
|
592 >chr1:8797248-879744 35 AATAAT 1 192 -
|
|
|
593 >chr1:6878570-687877 25 AATAAT 1 41 +
|
|
|
594 >chr1:6719561-671976 22 AATAAT 1 181 +
|
|
|
595 >chr1:6719561-671976 22 AATAAT 1 145 +
|
|
|
596 >chr1:6472202-647240 20 AATAAT 1 5 -
|
|
|
597 >chr1:6437830-643803 19 AATAAT 1 126 +
|
|
|
598 >chr1:6396504-639670 18 AATAAT 1 55 -
|
|
|
599 >chr1:6090845-609104 11 AATAAT 1 84 -
|
|
|
600 >chr1:6090845-609104 11 AATAAT 1 43 -
|
|
|
601 >chr1:5805347-580554 10 AATAAT 1 65 +
|
|
|
602 >chr1:4024990-402519 2 AATAAT 1 188 -
|
|
|
603 >chr1:3467418-346761 1 AATAAT 1 24 +
|
|
|
604 >chr1:9962925-996312 49 AATTAT 0.867789 189 -
|
|
|
605 >chr1:8797248-879744 35 AATTAT 0.867789 179 +
|
|
|
606 >chr1:7768736-776893 34 AATTAT 0.867789 107 +
|
|
|
607 >chr1:6719561-671976 22 AATTAT 0.867789 182 -
|
|
|
608 >chr1:6719561-671976 22 AATTAT 0.867789 146 -
|
|
|
609 >chr1:6588721-658892 21 AATTAT 0.867789 143 +
|
|
|
610 >chr1:6437830-643803 19 AATTAT 0.867789 127 -
|
|
|
611 >chr1:6396504-639670 18 AATTAT 0.867789 54 +
|
|
|
612 >chr1:6266967-626716 15 AATTAT 0.867789 18 +
|
|
|
613 >chr1:6090845-609104 11 AATTAT 0.867789 92 +
|
|
|
614 >chr1:6090845-609104 11 AATTAT 0.867789 83 +
|
|
|
615 >chr1:5805347-580554 10 AATTAT 0.867789 66 -
|
|
|
616 >chr1:8851545-885174 36 AATCAT 0.860628 122 +
|
|
|
617 >chr1:8797248-879744 35 AATCAT 0.860628 138 -
|
|
|
618 >chr1:7444756-744495 33 AATCAT 0.860628 13 +
|
|
|
619 >chr1:6090845-609104 11 AATCAT 0.860628 167 -
|
|
|
620 >chr1:5168670-516887 9 AATCAT 0.860628 31 -
|
|
|
621 >chr1:5072821-507302 8 AATCAT 0.860628 84 -
|
|
|
622 >chr1:4774948-477514 6 AATCAT 0.860628 139 -
|
|
|
623 >chr1:9978791-997899 50 AGTAAT 0.854996 31 -
|
|
|
624 >chr1:9568576-956877 41 AGTAAT 0.854996 154 +
|
|
|
625 >chr1:9013525-901372 37 AGTAAT 0.854996 183 +
|
|
|
626 >chr1:7209035-720923 26 AGTAAT 0.854996 183 -
|
|
|
627 >chr1:6878570-687877 25 AGTAAT 0.854996 64 +
|
|
|
628 >chr1:6719561-671976 22 AGTAAT 0.854996 137 -
|
|
|
629 >chr1:6588721-658892 21 AGTAAT 0.854996 9 +
|
|
|
630 >chr1:6472202-647240 20 AGTAAT 0.854996 176 +
|
|
|
631 >chr1:6472202-647240 20 AGTAAT 0.854996 29 +
|
|
|
632 >chr1:6360131-636033 17 AGTAAT 0.854996 86 -
|
|
|
633 >chr1:6262414-626261 14 AGTAAT 0.854996 160 -
|
|
|
634 >chr1:6090845-609104 11 AGTAAT 0.854996 20 +
|
|
|
635 >chr1:5805347-580554 10 AGTAAT 0.854996 176 +
|
|
|
636 >chr1:5072821-507302 8 AGTAAT 0.854996 46 -
|
|
|
637 >chr1:4774948-477514 6 AGTAAT 0.854996 194 +
|
|
|
638 >chr1:3467418-346761 1 AGTAAT 0.854996 32 -
|
|
|
639 **********
|
|
|
640
|
|
|
641 11) ATGACT (AGTCAT) 1.702
|
|
|
642
|
|
|
643 Matrix: MAT11 ATGACT
|
|
|
644 A 0.7923 0.07691 0.08105 0.8363 0.111 0.123
|
|
|
645 C 0.07045 0.02479 0.07396 0.02863 0.7081 0.04261
|
|
|
646 G 0.06487 0.02256 0.6694 0.03558 0.06369 0.01484
|
|
|
647 T 0.07241 0.8757 0.1756 0.0995 0.1172 0.8196
|
|
|
648
|
|
|
649 OCCURRENCES:
|
|
|
650 >chr1:9942670-994287 46 ATGACT 1 34 +
|
|
|
651 >chr1:9932599-993279 45 ATGACT 1 14 -
|
|
|
652 >chr1:9574131-957433 42 ATGACT 1 55 +
|
|
|
653 >chr1:9013525-901372 37 ATGACT 1 193 +
|
|
|
654 >chr1:7768736-776893 34 ATGACT 1 121 -
|
|
|
655 >chr1:7444756-744495 33 ATGACT 1 194 -
|
|
|
656 >chr1:7444756-744495 33 ATGACT 1 40 -
|
|
|
657 >chr1:7303541-730374 27 ATGACT 1 111 +
|
|
|
658 >chr1:6472202-647240 20 ATGACT 1 143 -
|
|
|
659 >chr1:6183701-618390 12 ATGACT 1 175 -
|
|
|
660 >chr1:4662531-466273 5 ATGACT 1 126 +
|
|
|
661 >chr1:9978791-997899 50 ATTACT 0.888601 31 +
|
|
|
662 >chr1:9568576-956877 41 ATTACT 0.888601 154 -
|
|
|
663 >chr1:9013525-901372 37 ATTACT 0.888601 183 -
|
|
|
664 >chr1:7209035-720923 26 ATTACT 0.888601 183 +
|
|
|
665 >chr1:6878570-687877 25 ATTACT 0.888601 64 -
|
|
|
666 >chr1:6719561-671976 22 ATTACT 0.888601 137 +
|
|
|
667 >chr1:6588721-658892 21 ATTACT 0.888601 9 -
|
|
|
668 >chr1:6472202-647240 20 ATTACT 0.888601 176 -
|
|
|
669 >chr1:6472202-647240 20 ATTACT 0.888601 29 -
|
|
|
670 >chr1:6360131-636033 17 ATTACT 0.888601 86 +
|
|
|
671 >chr1:6262414-626261 14 ATTACT 0.888601 160 +
|
|
|
672 >chr1:6090845-609104 11 ATTACT 0.888601 20 -
|
|
|
673 >chr1:5805347-580554 10 ATTACT 0.888601 176 -
|
|
|
674 >chr1:5072821-507302 8 ATTACT 0.888601 46 +
|
|
|
675 >chr1:4774948-477514 6 ATTACT 0.888601 194 -
|
|
|
676 >chr1:3467418-346761 1 ATTACT 0.888601 32 +
|
|
|
677 >chr1:8797248-879744 35 ATAACT 0.867272 132 +
|
|
|
678 >chr1:7209035-720923 26 ATAACT 0.867272 79 +
|
|
|
679 >chr1:6360131-636033 17 ATAACT 0.867272 111 -
|
|
|
680 >chr1:6262414-626261 14 ATAACT 0.867272 139 -
|
|
|
681 >chr1:6183701-618390 12 ATAACT 0.867272 7 -
|
|
|
682 >chr1:5072821-507302 8 ATAACT 0.867272 25 +
|
|
|
683 >chr1:9956513-995671 48 ATGATT 0.866692 35 -
|
|
|
684 >chr1:9013525-901372 37 ATGATT 0.866692 176 -
|
|
|
685 >chr1:8851545-885174 36 ATGATT 0.866692 122 -
|
|
|
686 >chr1:8797248-879744 35 ATGATT 0.866692 138 +
|
|
|
687 >chr1:7444756-744495 33 ATGATT 0.866692 13 -
|
|
|
688 >chr1:6090845-609104 11 ATGATT 0.866692 167 +
|
|
|
689 >chr1:5168670-516887 9 ATGATT 0.866692 31 +
|
|
|
690 >chr1:5072821-507302 8 ATGATT 0.866692 84 +
|
|
|
691 >chr1:4774948-477514 6 ATGATT 0.866692 139 +
|
|
|
692 >chr1:8851545-885174 36 ATGAAT 0.865302 86 -
|
|
|
693 >chr1:7303541-730374 27 ATGAAT 0.865302 171 -
|
|
|
694 >chr1:7303541-730374 27 ATGAAT 0.865302 107 +
|
|
|
695 >chr1:6437830-643803 19 ATGAAT 0.865302 130 -
|
|
|
696 >chr1:6183701-618390 12 ATGAAT 0.865302 71 +
|
|
|
697 >chr1:5072821-507302 8 ATGAAT 0.865302 127 +
|
|
|
698 >chr1:5072821-507302 8 ATGAAT 0.865302 87 -
|
|
|
699 >chr1:5072821-507302 8 ATGAAT 0.865302 21 +
|
|
|
700 **********
|
|
|
701
|
|
|
702 12) TTGAAA (TTTCAA) 1.693
|
|
|
703
|
|
|
704 Matrix: MAT12 TTGAAA
|
|
|
705 A 0.08972 0.0524 0.2142 0.8734 0.7765 0.8008
|
|
|
706 C 0.08565 0.01703 0.08046 0.009563 0.09992 0.05955
|
|
|
707 G 0.07526 0.08263 0.6446 0.04169 0.04608 0.03337
|
|
|
708 T 0.7494 0.8479 0.06075 0.07533 0.07746 0.1063
|
|
|
709
|
|
|
710 OCCURRENCES:
|
|
|
711 >chr1:9956513-995671 48 TTGAAA 1 180 +
|
|
|
712 >chr1:9948240-994844 47 TTGAAA 1 112 +
|
|
|
713 >chr1:9932599-993279 45 TTGAAA 1 125 -
|
|
|
714 >chr1:8797248-879744 35 TTGAAA 1 175 -
|
|
|
715 >chr1:7444756-744495 33 TTGAAA 1 161 -
|
|
|
716 >chr1:7388025-738822 30 TTGAAA 1 2 -
|
|
|
717 >chr1:7309743-730994 28 TTGAAA 1 146 -
|
|
|
718 >chr1:7209035-720923 26 TTGAAA 1 54 -
|
|
|
719 >chr1:6750817-675101 24 TTGAAA 1 153 +
|
|
|
720 >chr1:6588721-658892 21 TTGAAA 1 101 +
|
|
|
721 >chr1:6396504-639670 18 TTGAAA 1 179 +
|
|
|
722 >chr1:6266967-626716 15 TTGAAA 1 176 -
|
|
|
723 >chr1:6090845-609104 11 TTGAAA 1 102 +
|
|
|
724 >chr1:4562216-456241 4 TTGAAA 1 148 -
|
|
|
725 >chr1:3467418-346761 1 TTGAAA 1 190 +
|
|
|
726 >chr1:6205539-620573 13 TTAAAA 0.903286 157 +
|
|
|
727 >chr1:6205539-620573 13 TTAAAA 0.903286 28 +
|
|
|
728 >chr1:6090845-609104 11 TTAAAA 0.903286 171 +
|
|
|
729 >chr1:6090845-609104 11 TTAAAA 0.903286 151 -
|
|
|
730 >chr1:5072821-507302 8 TTAAAA 0.903286 114 +
|
|
|
731 >chr1:4024990-402519 2 TTAAAA 0.903286 81 +
|
|
|
732 >chr1:3467418-346761 1 TTAAAA 0.903286 184 -
|
|
|
733 >chr1:9942670-994287 46 TTGACA 0.847972 92 +
|
|
|
734 >chr1:8851545-885174 36 TTGACA 0.847972 190 +
|
|
|
735 >chr1:8797248-879744 35 TTGACA 0.847972 125 -
|
|
|
736 >chr1:7768736-776893 34 TTGACA 0.847972 75 -
|
|
|
737 >chr1:7444756-744495 33 TTGACA 0.847972 9 -
|
|
|
738 >chr1:7209035-720923 26 TTGACA 0.847972 122 -
|
|
|
739 >chr1:6437830-643803 19 TTGACA 0.847972 7 -
|
|
|
740 >chr1:6205539-620573 13 TTGACA 0.847972 136 +
|
|
|
741 >chr1:6090845-609104 11 TTGACA 0.847972 181 +
|
|
|
742 >chr1:5805347-580554 10 TTGACA 0.847972 119 -
|
|
|
743 >chr1:4833767-483396 7 TTGACA 0.847972 30 -
|
|
|
744 >chr1:4024990-402519 2 TTGACA 0.847972 21 +
|
|
|
745 >chr1:9942670-994287 46 TTGAAT 0.843956 162 +
|
|
|
746 >chr1:7444756-744495 33 TTGAAT 0.843956 134 +
|
|
|
747 >chr1:7413722-741392 32 TTGAAT 0.843956 123 -
|
|
|
748 >chr1:6721868-672206 23 TTGAAT 0.843956 85 +
|
|
|
749 >chr1:6277750-627795 16 TTGAAT 0.843956 35 -
|
|
|
750 >chr1:6277750-627795 16 TTGAAT 0.843956 25 +
|
|
|
751 >chr1:6183701-618390 12 TTGAAT 0.843956 87 +
|
|
|
752 >chr1:6090845-609104 11 TTGAAT 0.843956 119 -
|
|
|
753 >chr1:6090845-609104 11 TTGAAT 0.843956 115 +
|
|
|
754 >chr1:5072821-507302 8 TTGAAT 0.843956 155 -
|
|
|
755 >chr1:9978791-997899 50 TTGATA 0.842925 71 +
|
|
|
756 >chr1:9568576-956877 41 TTGATA 0.842925 190 -
|
|
|
757 >chr1:9460371-946057 38 TTGATA 0.842925 85 -
|
|
|
758 >chr1:6588721-658892 21 TTGATA 0.842925 146 -
|
|
|
759 >chr1:6205539-620573 13 TTGATA 0.842925 96 +
|
|
|
760 >chr1:4833767-483396 7 TTGATA 0.842925 23 -
|
|
|
761 **********
|
|
|
762
|
|
|
763 13) ATTTTA (TAAAAT) 1.691
|
|
|
764
|
|
|
765 Matrix: MAT13 ATTTTA
|
|
|
766 A 0.7686 0.09324 0.05315 0.07052 0.1079 0.7442
|
|
|
767 C 0.05296 0.05566 0.02564 0.04286 0.09559 0.0825
|
|
|
768 G 0.06642 0.0539 0.07598 0.07754 0.08916 0.06427
|
|
|
769 T 0.112 0.7972 0.8452 0.8091 0.7073 0.1091
|
|
|
770
|
|
|
771 OCCURRENCES:
|
|
|
772 >chr1:9956513-995671 48 ATTTTA 1 185 +
|
|
|
773 >chr1:9942670-994287 46 ATTTTA 1 135 -
|
|
|
774 >chr1:9813405-981360 44 ATTTTA 1 132 -
|
|
|
775 >chr1:9013525-901372 37 ATTTTA 1 135 -
|
|
|
776 >chr1:9013525-901372 37 ATTTTA 1 113 -
|
|
|
777 >chr1:8851545-885174 36 ATTTTA 1 104 -
|
|
|
778 >chr1:8797248-879744 35 ATTTTA 1 147 -
|
|
|
779 >chr1:7768736-776893 34 ATTTTA 1 135 -
|
|
|
780 >chr1:7413722-741392 32 ATTTTA 1 11 +
|
|
|
781 >chr1:7388801-738900 31 ATTTTA 1 63 +
|
|
|
782 >chr1:7386917-738711 29 ATTTTA 1 31 -
|
|
|
783 >chr1:6472202-647240 20 ATTTTA 1 33 +
|
|
|
784 >chr1:6266967-626716 15 ATTTTA 1 3 -
|
|
|
785 >chr1:6262414-626261 14 ATTTTA 1 184 +
|
|
|
786 >chr1:6205539-620573 13 ATTTTA 1 158 -
|
|
|
787 >chr1:6205539-620573 13 ATTTTA 1 29 -
|
|
|
788 >chr1:6090845-609104 11 ATTTTA 1 150 +
|
|
|
789 >chr1:5805347-580554 10 ATTTTA 1 155 +
|
|
|
790 >chr1:5072821-507302 8 ATTTTA 1 115 -
|
|
|
791 >chr1:4833767-483396 7 ATTTTA 1 122 -
|
|
|
792 >chr1:4024990-402519 2 ATTTTA 1 118 -
|
|
|
793 >chr1:3467418-346761 1 ATTTTA 1 183 +
|
|
|
794 >chr1:3467418-346761 1 ATTTTA 1 134 +
|
|
|
795 >chr1:8851545-885174 36 ATTTGA 0.857659 188 +
|
|
|
796 >chr1:8851545-885174 36 ATTTGA 0.857659 184 -
|
|
|
797 >chr1:8851545-885174 36 ATTTGA 0.857659 96 -
|
|
|
798 >chr1:6719561-671976 22 ATTTGA 0.857659 142 -
|
|
|
799 >chr1:5805347-580554 10 ATTTGA 0.857659 180 +
|
|
|
800 >chr1:5805347-580554 10 ATTTGA 0.857659 121 -
|
|
|
801 >chr1:4833767-483396 7 ATTTGA 0.857659 126 +
|
|
|
802 >chr1:4833767-483396 7 ATTTGA 0.857659 25 -
|
|
|
803 >chr1:9813405-981360 44 ATTGTA 0.83155 28 -
|
|
|
804 >chr1:9535189-953538 39 ATTGTA 0.83155 43 -
|
|
|
805 >chr1:7386917-738711 29 ATTGTA 0.83155 47 -
|
|
|
806 >chr1:6878570-687877 25 ATTGTA 0.83155 36 +
|
|
|
807 >chr1:6090845-609104 11 ATTGTA 0.83155 87 +
|
|
|
808 >chr1:5805347-580554 10 ATTGTA 0.83155 127 -
|
|
|
809 >chr1:4774948-477514 6 ATTGTA 0.83155 120 +
|
|
|
810 >chr1:9948240-994844 47 ATTATA 0.829934 57 -
|
|
|
811 >chr1:7444756-744495 33 ATTATA 0.829934 71 -
|
|
|
812 >chr1:6721868-672206 23 ATTATA 0.829934 124 +
|
|
|
813 >chr1:6266967-626716 15 ATTATA 0.829934 19 +
|
|
|
814 >chr1:6090845-609104 11 ATTATA 0.829934 93 +
|
|
|
815 >chr1:9956513-995671 48 ATGTTA 0.822869 137 -
|
|
|
816 >chr1:9574131-957433 42 ATGTTA 0.822869 104 +
|
|
|
817 >chr1:9554705-955490 40 ATGTTA 0.822869 47 +
|
|
|
818 >chr1:8851545-885174 36 ATGTTA 0.822869 100 +
|
|
|
819 >chr1:8797248-879744 35 ATGTTA 0.822869 103 -
|
|
|
820 >chr1:7768736-776893 34 ATGTTA 0.822869 80 +
|
|
|
821 >chr1:6090845-609104 11 ATGTTA 0.822869 154 -
|
|
|
822 **********
|
|
|
823
|
|
|
824 14) TAAACA (TGTTTA) 1.685
|
|
|
825
|
|
|
826 Matrix: MAT14 TAAACA
|
|
|
827 A 0.1209 0.7643 0.8407 0.816 0.1373 0.8505
|
|
|
828 C 0.06995 0.06399 0.03895 0.04513 0.685 0.05353
|
|
|
829 G 0.09693 0.07741 0.05489 0.04938 0.08995 0.02176
|
|
|
830 T 0.7122 0.09432 0.06543 0.08946 0.08774 0.07422
|
|
|
831
|
|
|
832 OCCURRENCES:
|
|
|
833 >chr1:9948240-994844 47 TAAACA 1 130 +
|
|
|
834 >chr1:9942670-994287 46 TAAACA 1 81 +
|
|
|
835 >chr1:9932599-993279 45 TAAACA 1 148 -
|
|
|
836 >chr1:9574131-957433 42 TAAACA 1 5 +
|
|
|
837 >chr1:9013525-901372 37 TAAACA 1 161 -
|
|
|
838 >chr1:7768736-776893 34 TAAACA 1 169 +
|
|
|
839 >chr1:7388801-738900 31 TAAACA 1 90 +
|
|
|
840 >chr1:6472202-647240 20 TAAACA 1 12 -
|
|
|
841 >chr1:6360131-636033 17 TAAACA 1 144 +
|
|
|
842 >chr1:6360131-636033 17 TAAACA 1 6 -
|
|
|
843 >chr1:5805347-580554 10 TAAACA 1 18 +
|
|
|
844 >chr1:5072821-507302 8 TAAACA 1 149 -
|
|
|
845 >chr1:5072821-507302 8 TAAACA 1 15 +
|
|
|
846 >chr1:4562216-456241 4 TAAACA 1 167 +
|
|
|
847 >chr1:7209035-720923 26 TAAAGA 0.862934 168 +
|
|
|
848 >chr1:6721868-672206 23 TAAAGA 0.862934 96 -
|
|
|
849 >chr1:6588721-658892 21 TAAAGA 0.862934 84 -
|
|
|
850 >chr1:6437830-643803 19 TAAAGA 0.862934 173 -
|
|
|
851 >chr1:6396504-639670 18 TAAAGA 0.862934 5 +
|
|
|
852 >chr1:6205539-620573 13 TAAAGA 0.862934 190 +
|
|
|
853 >chr1:6205539-620573 13 TAAAGA 0.862934 25 -
|
|
|
854 >chr1:4024990-402519 2 TAAAGA 0.862934 36 +
|
|
|
855 >chr1:9962925-996312 49 TTAACA 0.845673 121 +
|
|
|
856 >chr1:9932599-993279 45 TTAACA 0.845673 43 -
|
|
|
857 >chr1:9574131-957433 42 TTAACA 0.845673 105 -
|
|
|
858 >chr1:9554705-955490 40 TTAACA 0.845673 48 -
|
|
|
859 >chr1:8851545-885174 36 TTAACA 0.845673 101 -
|
|
|
860 >chr1:6266967-626716 15 TTAACA 0.845673 42 -
|
|
|
861 >chr1:6090845-609104 11 TTAACA 0.845673 153 +
|
|
|
862 >chr1:4024990-402519 2 TTAACA 0.845673 79 -
|
|
|
863 >chr1:9956513-995671 48 TCAACA 0.838688 85 +
|
|
|
864 >chr1:9568576-956877 41 TCAACA 0.838688 88 -
|
|
|
865 >chr1:8797248-879744 35 TCAACA 0.838688 127 +
|
|
|
866 >chr1:6878570-687877 25 TCAACA 0.838688 2 -
|
|
|
867 >chr1:6262414-626261 14 TCAACA 0.838688 130 -
|
|
|
868 >chr1:6205539-620573 13 TCAACA 0.838688 134 -
|
|
|
869 >chr1:6183701-618390 12 TCAACA 0.838688 54 -
|
|
|
870 >chr1:9932599-993279 45 TAATCA 0.832635 46 +
|
|
|
871 >chr1:9013525-901372 37 TAATCA 0.832635 175 +
|
|
|
872 >chr1:6878570-687877 25 TAATCA 0.832635 91 +
|
|
|
873 >chr1:6090845-609104 11 TAATCA 0.832635 168 -
|
|
|
874 >chr1:4774948-477514 6 TAATCA 0.832635 140 -
|
|
|
875 >chr1:4024990-402519 2 TAATCA 0.832635 186 -
|
|
|
876 >chr1:3467418-346761 1 TAATCA 0.832635 50 +
|
|
|
877 >chr1:9956513-995671 48 TATACA 0.821406 153 -
|
|
|
878 >chr1:9948240-994844 47 TATACA 0.821406 126 -
|
|
|
879 >chr1:9568576-956877 41 TATACA 0.821406 107 -
|
|
|
880 >chr1:6437830-643803 19 TATACA 0.821406 105 +
|
|
|
881 >chr1:6205539-620573 13 TATACA 0.821406 165 +
|
|
|
882 >chr1:6183701-618390 12 TATACA 0.821406 10 +
|
|
|
883 **********
|
|
|
884
|
|
|
885 15) ATGATT (AATCAT) 1.678
|
|
|
886
|
|
|
887 Matrix: MAT15 ATGATT
|
|
|
888 A 0.7798 0.03895 0.1394 0.8016 0.09996 0.05479
|
|
|
889 C 0.04628 0.04674 0.09287 0.04385 0.1069 0.06237
|
|
|
890 G 0.07995 0.03341 0.6306 0.0422 0.05873 0.09202
|
|
|
891 T 0.09401 0.8809 0.1371 0.1123 0.7344 0.7908
|
|
|
892
|
|
|
893 OCCURRENCES:
|
|
|
894 >chr1:9956513-995671 48 ATGATT 1 35 -
|
|
|
895 >chr1:9013525-901372 37 ATGATT 1 176 -
|
|
|
896 >chr1:8851545-885174 36 ATGATT 1 122 -
|
|
|
897 >chr1:8797248-879744 35 ATGATT 1 138 +
|
|
|
898 >chr1:7444756-744495 33 ATGATT 1 13 -
|
|
|
899 >chr1:6090845-609104 11 ATGATT 1 167 +
|
|
|
900 >chr1:5168670-516887 9 ATGATT 1 31 +
|
|
|
901 >chr1:5072821-507302 8 ATGATT 1 84 +
|
|
|
902 >chr1:4774948-477514 6 ATGATT 1 139 +
|
|
|
903 >chr1:9962925-996312 49 ATAATT 0.885497 189 +
|
|
|
904 >chr1:8797248-879744 35 ATAATT 0.885497 179 -
|
|
|
905 >chr1:7768736-776893 34 ATAATT 0.885497 107 -
|
|
|
906 >chr1:6719561-671976 22 ATAATT 0.885497 182 +
|
|
|
907 >chr1:6719561-671976 22 ATAATT 0.885497 146 +
|
|
|
908 >chr1:6588721-658892 21 ATAATT 0.885497 143 -
|
|
|
909 >chr1:6437830-643803 19 ATAATT 0.885497 127 +
|
|
|
910 >chr1:6396504-639670 18 ATAATT 0.885497 54 -
|
|
|
911 >chr1:6266967-626716 15 ATAATT 0.885497 18 -
|
|
|
912 >chr1:6090845-609104 11 ATAATT 0.885497 92 -
|
|
|
913 >chr1:6090845-609104 11 ATAATT 0.885497 83 -
|
|
|
914 >chr1:5805347-580554 10 ATAATT 0.885497 66 +
|
|
|
915 >chr1:9962925-996312 49 ATTATT 0.884969 188 -
|
|
|
916 >chr1:9962925-996312 49 ATTATT 0.884969 133 +
|
|
|
917 >chr1:9942670-994287 46 ATTATT 0.884969 73 +
|
|
|
918 >chr1:8797248-879744 35 ATTATT 0.884969 192 +
|
|
|
919 >chr1:6878570-687877 25 ATTATT 0.884969 41 -
|
|
|
920 >chr1:6719561-671976 22 ATTATT 0.884969 181 -
|
|
|
921 >chr1:6719561-671976 22 ATTATT 0.884969 145 -
|
|
|
922 >chr1:6472202-647240 20 ATTATT 0.884969 5 +
|
|
|
923 >chr1:6437830-643803 19 ATTATT 0.884969 126 -
|
|
|
924 >chr1:6396504-639670 18 ATTATT 0.884969 55 +
|
|
|
925 >chr1:6090845-609104 11 ATTATT 0.884969 84 +
|
|
|
926 >chr1:6090845-609104 11 ATTATT 0.884969 43 +
|
|
|
927 >chr1:5805347-580554 10 ATTATT 0.884969 65 -
|
|
|
928 >chr1:4024990-402519 2 ATTATT 0.884969 188 +
|
|
|
929 >chr1:3467418-346761 1 ATTATT 0.884969 24 -
|
|
|
930 >chr1:9978791-997899 50 ATCATT 0.874651 77 -
|
|
|
931 >chr1:9932599-993279 45 ATCATT 0.874651 18 +
|
|
|
932 >chr1:9013525-901372 37 ATCATT 0.874651 40 -
|
|
|
933 >chr1:7444756-744495 33 ATCATT 0.874651 104 -
|
|
|
934 >chr1:6277750-627795 16 ATCATT 0.874651 98 +
|
|
|
935 >chr1:6205539-620573 13 ATCATT 0.874651 38 +
|
|
|
936 >chr1:5168670-516887 9 ATCATT 0.874651 30 -
|
|
|
937 >chr1:4774948-477514 6 ATCATT 0.874651 138 -
|
|
|
938 >chr1:6472202-647240 20 ATGACT 0.853739 143 -
|
|
|
939 >chr1:6183701-618390 12 ATGACT 0.853739 175 -
|
|
|
940 >chr1:4662531-466273 5 ATGACT 0.853739 126 +
|
|
|
941 >chr1:9942670-994287 46 ACGATT 0.805545 105 -
|
|
|
942 >chr1:4833767-483396 7 ACGATT 0.805545 63 -
|
|
|
943 >chr1:4662531-466273 5 ACGATT 0.805545 58 -
|
|
|
944 **********
|
|
|
945
|
|
|
946 16) AGTATT (AATACT) 1.664
|
|
|
947
|
|
|
948 Matrix: MAT16 AGTATT
|
|
|
949 A 0.8169 0.03667 0.1017 0.7024 0.1984 0.05968
|
|
|
950 C 0.01586 0.0534 0.06469 0.08485 0.01561 0.04079
|
|
|
951 G 0.03184 0.739 0.03857 0.072 0.06428 0.04865
|
|
|
952 T 0.1354 0.1709 0.7951 0.1407 0.7217 0.8509
|
|
|
953
|
|
|
954 OCCURRENCES:
|
|
|
955 >chr1:9574131-957433 42 AGTATT 1 164 -
|
|
|
956 >chr1:8851545-885174 36 AGTATT 1 143 -
|
|
|
957 >chr1:7444756-744495 33 AGTATT 1 137 -
|
|
|
958 >chr1:7388801-738900 31 AGTATT 1 75 -
|
|
|
959 >chr1:7209035-720923 26 AGTATT 1 10 -
|
|
|
960 >chr1:6262414-626261 14 AGTATT 1 181 +
|
|
|
961 >chr1:5805347-580554 10 AGTATT 1 152 +
|
|
|
962 >chr1:4833767-483396 7 AGTATT 1 18 +
|
|
|
963 >chr1:4402453-440265 3 AGTATT 1 177 +
|
|
|
964 >chr1:9978791-997899 50 AGTAAT 0.881262 31 -
|
|
|
965 >chr1:9568576-956877 41 AGTAAT 0.881262 154 +
|
|
|
966 >chr1:9013525-901372 37 AGTAAT 0.881262 183 +
|
|
|
967 >chr1:7209035-720923 26 AGTAAT 0.881262 183 -
|
|
|
968 >chr1:6878570-687877 25 AGTAAT 0.881262 64 +
|
|
|
969 >chr1:6719561-671976 22 AGTAAT 0.881262 137 -
|
|
|
970 >chr1:6588721-658892 21 AGTAAT 0.881262 9 +
|
|
|
971 >chr1:6472202-647240 20 AGTAAT 0.881262 176 +
|
|
|
972 >chr1:6472202-647240 20 AGTAAT 0.881262 29 +
|
|
|
973 >chr1:6360131-636033 17 AGTAAT 0.881262 86 -
|
|
|
974 >chr1:6262414-626261 14 AGTAAT 0.881262 160 -
|
|
|
975 >chr1:6090845-609104 11 AGTAAT 0.881262 20 +
|
|
|
976 >chr1:5805347-580554 10 AGTAAT 0.881262 176 +
|
|
|
977 >chr1:5072821-507302 8 AGTAAT 0.881262 46 -
|
|
|
978 >chr1:4774948-477514 6 AGTAAT 0.881262 194 +
|
|
|
979 >chr1:3467418-346761 1 AGTAAT 0.881262 32 -
|
|
|
980 >chr1:9962925-996312 49 ATTATT 0.871068 188 -
|
|
|
981 >chr1:9962925-996312 49 ATTATT 0.871068 133 +
|
|
|
982 >chr1:9942670-994287 46 ATTATT 0.871068 73 +
|
|
|
983 >chr1:8797248-879744 35 ATTATT 0.871068 192 +
|
|
|
984 >chr1:6878570-687877 25 ATTATT 0.871068 41 -
|
|
|
985 >chr1:6719561-671976 22 ATTATT 0.871068 181 -
|
|
|
986 >chr1:6719561-671976 22 ATTATT 0.871068 145 -
|
|
|
987 >chr1:6472202-647240 20 ATTATT 0.871068 5 +
|
|
|
988 >chr1:6437830-643803 19 ATTATT 0.871068 126 -
|
|
|
989 >chr1:6396504-639670 18 ATTATT 0.871068 55 +
|
|
|
990 >chr1:6090845-609104 11 ATTATT 0.871068 84 +
|
|
|
991 >chr1:6090845-609104 11 ATTATT 0.871068 43 +
|
|
|
992 >chr1:5805347-580554 10 ATTATT 0.871068 65 -
|
|
|
993 >chr1:4024990-402519 2 ATTATT 0.871068 188 +
|
|
|
994 >chr1:3467418-346761 1 ATTATT 0.871068 24 -
|
|
|
995 >chr1:9956513-995671 48 TGTATT 0.845348 68 -
|
|
|
996 >chr1:9948240-994844 47 TGTATT 0.845348 84 +
|
|
|
997 >chr1:9942670-994287 46 TGTATT 0.845348 156 -
|
|
|
998 >chr1:9574131-957433 42 TGTATT 0.845348 48 +
|
|
|
999 >chr1:7768736-776893 34 TGTATT 0.845348 126 +
|
|
|
1000 >chr1:5072821-507302 8 TGTATT 0.845348 43 +
|
|
|
1001 >chr1:4024990-402519 2 TGTATT 0.845348 173 +
|
|
|
1002 >chr1:3467418-346761 1 TGTATT 0.845348 114 +
|
|
|
1003 >chr1:3467418-346761 1 TGTATT 0.845348 27 -
|
|
|
1004 >chr1:3467418-346761 1 TGTATT 0.845348 5 -
|
|
|
1005 **********
|
|
|
1006
|
|
|
1007 17) TTGAGT (ACTCAA) 1.574
|
|
|
1008
|
|
|
1009 Matrix: MAT17 TTGAGT
|
|
|
1010 A 0.1122 0.08252 0.1535 0.8677 0.167 0.08711
|
|
|
1011 C 0.05038 0.01835 0.1439 0.01705 0.09193 0.05017
|
|
|
1012 G 0.1 0.04409 0.647 0.02826 0.5944 0.03802
|
|
|
1013 T 0.7373 0.855 0.05572 0.08702 0.1467 0.8247
|
|
|
1014
|
|
|
1015 OCCURRENCES:
|
|
|
1016 >chr1:9978791-997899 50 TTGAGT 1 34 -
|
|
|
1017 >chr1:9956513-995671 48 TTGAGT 1 83 -
|
|
|
1018 >chr1:9574131-957433 42 TTGAGT 1 43 +
|
|
|
1019 >chr1:9568576-956877 41 TTGAGT 1 90 +
|
|
|
1020 >chr1:8851545-885174 36 TTGAGT 1 94 -
|
|
|
1021 >chr1:7413722-741392 32 TTGAGT 1 165 +
|
|
|
1022 >chr1:7388801-738900 31 TTGAGT 1 78 -
|
|
|
1023 >chr1:7309743-730994 28 TTGAGT 1 133 +
|
|
|
1024 >chr1:7209035-720923 26 TTGAGT 1 90 +
|
|
|
1025 >chr1:6719561-671976 22 TTGAGT 1 140 -
|
|
|
1026 >chr1:6262414-626261 14 TTGAGT 1 132 +
|
|
|
1027 >chr1:6183701-618390 12 TTGAGT 1 56 +
|
|
|
1028 >chr1:5072821-507302 8 TTGAGT 1 174 -
|
|
|
1029 >chr1:4833767-483396 7 TTGAGT 1 3 +
|
|
|
1030 >chr1:9942670-994287 46 TTGAAT 0.89953 162 +
|
|
|
1031 >chr1:7444756-744495 33 TTGAAT 0.89953 134 +
|
|
|
1032 >chr1:7413722-741392 32 TTGAAT 0.89953 123 -
|
|
|
1033 >chr1:6721868-672206 23 TTGAAT 0.89953 85 +
|
|
|
1034 >chr1:6277750-627795 16 TTGAAT 0.89953 35 -
|
|
|
1035 >chr1:6277750-627795 16 TTGAAT 0.89953 25 +
|
|
|
1036 >chr1:6183701-618390 12 TTGAAT 0.89953 87 +
|
|
|
1037 >chr1:6090845-609104 11 TTGAAT 0.89953 119 -
|
|
|
1038 >chr1:6090845-609104 11 TTGAAT 0.89953 115 +
|
|
|
1039 >chr1:5072821-507302 8 TTGAAT 0.89953 155 -
|
|
|
1040 >chr1:9932599-993279 45 TTGATT 0.89477 47 -
|
|
|
1041 >chr1:9574131-957433 42 TTGATT 0.89477 147 -
|
|
|
1042 >chr1:8851545-885174 36 TTGATT 0.89477 118 -
|
|
|
1043 >chr1:8797248-879744 35 TTGATT 0.89477 7 +
|
|
|
1044 >chr1:6878570-687877 25 TTGATT 0.89477 92 -
|
|
|
1045 >chr1:4833767-483396 7 TTGATT 0.89477 128 +
|
|
|
1046 >chr1:4562216-456241 4 TTGATT 0.89477 144 +
|
|
|
1047 >chr1:4402453-440265 3 TTGATT 0.89477 130 +
|
|
|
1048 >chr1:4024990-402519 2 TTGATT 0.89477 185 +
|
|
|
1049 >chr1:9962925-996312 49 TTAAGT 0.884013 119 -
|
|
|
1050 >chr1:9932599-993279 45 TTAAGT 0.884013 11 +
|
|
|
1051 >chr1:9932599-993279 45 TTAAGT 0.884013 9 -
|
|
|
1052 >chr1:9574131-957433 42 TTAAGT 0.884013 58 -
|
|
|
1053 >chr1:9013525-901372 37 TTAAGT 0.884013 164 +
|
|
|
1054 >chr1:8797248-879744 35 TTAAGT 0.884013 120 +
|
|
|
1055 >chr1:8797248-879744 35 TTAAGT 0.884013 84 -
|
|
|
1056 >chr1:6396504-639670 18 TTAAGT 0.884013 109 -
|
|
|
1057 >chr1:6360131-636033 17 TTAAGT 0.884013 43 -
|
|
|
1058 >chr1:6396504-639670 18 TTGACT 0.881899 34 -
|
|
|
1059 >chr1:4833767-483396 7 TTGACT 0.881899 6 -
|
|
|
1060 >chr1:9813405-981360 44 ATGAGT 0.853079 136 +
|
|
|
1061 >chr1:6588721-658892 21 ATGAGT 0.853079 75 -
|
|
|
1062 >chr1:6472202-647240 20 ATGAGT 0.853079 20 +
|
|
|
1063 >chr1:6277750-627795 16 ATGAGT 0.853079 42 -
|
|
|
1064 >chr1:6262414-626261 14 ATGAGT 0.853079 178 +
|
|
|
1065 >chr1:6205539-620573 13 ATGAGT 0.853079 20 +
|
|
|
1066 **********
|
|
|
1067
|
|
|
1068 18) TAAAAC (GTTTTA) 1.572
|
|
|
1069
|
|
|
1070 Matrix: MAT18 TAAAAC
|
|
|
1071 A 0.09976 0.6641 0.8508 0.8037 0.7918 0.1444
|
|
|
1072 C 0.1021 0.08641 0.05693 0.04963 0.05966 0.5613
|
|
|
1073 G 0.05432 0.1092 0.04048 0.04923 0.04498 0.06765
|
|
|
1074 T 0.7438 0.1403 0.05175 0.09743 0.1036 0.2267
|
|
|
1075
|
|
|
1076 OCCURRENCES:
|
|
|
1077 >chr1:9813405-981360 44 TAAAAC 1 140 -
|
|
|
1078 >chr1:7388801-738900 31 TAAAAC 1 51 +
|
|
|
1079 >chr1:7303541-730374 27 TAAAAC 1 12 +
|
|
|
1080 >chr1:6472202-647240 20 TAAAAC 1 133 -
|
|
|
1081 >chr1:4774948-477514 6 TAAAAC 1 124 +
|
|
|
1082 >chr1:4662531-466273 5 TAAAAC 1 38 +
|
|
|
1083 >chr1:4024990-402519 2 TAAAAC 1 82 +
|
|
|
1084 >chr1:9956513-995671 48 TAAAAT 0.917837 185 -
|
|
|
1085 >chr1:9942670-994287 46 TAAAAT 0.917837 135 +
|
|
|
1086 >chr1:9813405-981360 44 TAAAAT 0.917837 132 +
|
|
|
1087 >chr1:9013525-901372 37 TAAAAT 0.917837 135 +
|
|
|
1088 >chr1:9013525-901372 37 TAAAAT 0.917837 113 +
|
|
|
1089 >chr1:8851545-885174 36 TAAAAT 0.917837 104 +
|
|
|
1090 >chr1:8797248-879744 35 TAAAAT 0.917837 147 +
|
|
|
1091 >chr1:7768736-776893 34 TAAAAT 0.917837 135 +
|
|
|
1092 >chr1:7413722-741392 32 TAAAAT 0.917837 11 -
|
|
|
1093 >chr1:7388801-738900 31 TAAAAT 0.917837 63 -
|
|
|
1094 >chr1:7386917-738711 29 TAAAAT 0.917837 31 +
|
|
|
1095 >chr1:6472202-647240 20 TAAAAT 0.917837 33 -
|
|
|
1096 >chr1:6266967-626716 15 TAAAAT 0.917837 3 +
|
|
|
1097 >chr1:6262414-626261 14 TAAAAT 0.917837 184 -
|
|
|
1098 >chr1:6205539-620573 13 TAAAAT 0.917837 158 +
|
|
|
1099 >chr1:6205539-620573 13 TAAAAT 0.917837 29 +
|
|
|
1100 >chr1:6090845-609104 11 TAAAAT 0.917837 150 -
|
|
|
1101 >chr1:5805347-580554 10 TAAAAT 0.917837 155 -
|
|
|
1102 >chr1:5072821-507302 8 TAAAAT 0.917837 115 +
|
|
|
1103 >chr1:4833767-483396 7 TAAAAT 0.917837 122 +
|
|
|
1104 >chr1:4024990-402519 2 TAAAAT 0.917837 118 +
|
|
|
1105 >chr1:3467418-346761 1 TAAAAT 0.917837 183 -
|
|
|
1106 >chr1:3467418-346761 1 TAAAAT 0.917837 134 -
|
|
|
1107 >chr1:9962925-996312 49 TTAAAC 0.871367 7 +
|
|
|
1108 >chr1:9942670-994287 46 TTAAAC 0.871367 80 +
|
|
|
1109 >chr1:9013525-901372 37 TTAAAC 0.871367 162 -
|
|
|
1110 >chr1:9013525-901372 37 TTAAAC 0.871367 110 -
|
|
|
1111 >chr1:8797248-879744 35 TTAAAC 0.871367 118 -
|
|
|
1112 >chr1:7444756-744495 33 TTAAAC 0.871367 99 -
|
|
|
1113 >chr1:7413722-741392 32 TTAAAC 0.871367 188 -
|
|
|
1114 >chr1:7388801-738900 31 TTAAAC 0.871367 37 +
|
|
|
1115 >chr1:6360131-636033 17 TTAAAC 0.871367 143 +
|
|
|
1116 >chr1:6360131-636033 17 TTAAAC 0.871367 7 -
|
|
|
1117 >chr1:5805347-580554 10 TTAAAC 0.871367 17 +
|
|
|
1118 >chr1:5072821-507302 8 TTAAAC 0.871367 150 -
|
|
|
1119 >chr1:4833767-483396 7 TAAATC 0.831007 94 -
|
|
|
1120 >chr1:4662531-466273 5 TAAATC 0.831007 56 +
|
|
|
1121 >chr1:9574131-957433 42 TAATAC 0.826572 163 +
|
|
|
1122 >chr1:7768736-776893 34 TAATAC 0.826572 127 -
|
|
|
1123 >chr1:5072821-507302 8 TAATAC 0.826572 44 -
|
|
|
1124 >chr1:4833767-483396 7 TAATAC 0.826572 19 -
|
|
|
1125 >chr1:3467418-346761 1 TAATAC 0.826572 26 +
|
|
|
1126 >chr1:3467418-346761 1 TAATAC 0.826572 4 +
|
|
|
1127 **********
|
|
|
1128
|
|
|
1129 19) GTGAAT (ATTCAC) 1.568
|
|
|
1130
|
|
|
1131 Matrix: MAT19 GTGAAT
|
|
|
1132 A 0.1593 0.04483 0.06949 0.8955 0.7175 0.1105
|
|
|
1133 C 0.07553 0.01876 0.09003 0.01629 0.08374 0.06563
|
|
|
1134 G 0.6152 0.0609 0.7443 0.03019 0.08214 0.05749
|
|
|
1135 T 0.15 0.8755 0.09618 0.05804 0.1166 0.7664
|
|
|
1136
|
|
|
1137 OCCURRENCES:
|
|
|
1138 >chr1:9956513-995671 48 GTGAAT 1 79 -
|
|
|
1139 >chr1:7209035-720923 26 GTGAAT 1 156 -
|
|
|
1140 >chr1:6878570-687877 25 GTGAAT 1 53 +
|
|
|
1141 >chr1:6588721-658892 21 GTGAAT 1 30 -
|
|
|
1142 >chr1:6437830-643803 19 GTGAAT 1 123 +
|
|
|
1143 >chr1:6277750-627795 16 GTGAAT 1 29 -
|
|
|
1144 >chr1:6266967-626716 15 GTGAAT 1 15 +
|
|
|
1145 >chr1:6262414-626261 14 GTGAAT 1 174 +
|
|
|
1146 >chr1:5168670-516887 9 GTGAAT 1 154 -
|
|
|
1147 >chr1:4402453-440265 3 GTGAAT 1 133 -
|
|
|
1148 >chr1:4024990-402519 2 GTGAAT 1 62 +
|
|
|
1149 >chr1:9574131-957433 42 ATGAAT 0.89386 83 +
|
|
|
1150 >chr1:9574131-957433 42 ATGAAT 0.89386 51 -
|
|
|
1151 >chr1:9013525-901372 37 ATGAAT 0.89386 117 -
|
|
|
1152 >chr1:8851545-885174 36 ATGAAT 0.89386 86 -
|
|
|
1153 >chr1:7303541-730374 27 ATGAAT 0.89386 171 -
|
|
|
1154 >chr1:7303541-730374 27 ATGAAT 0.89386 107 +
|
|
|
1155 >chr1:6437830-643803 19 ATGAAT 0.89386 130 -
|
|
|
1156 >chr1:6183701-618390 12 ATGAAT 0.89386 71 +
|
|
|
1157 >chr1:5072821-507302 8 ATGAAT 0.89386 127 +
|
|
|
1158 >chr1:5072821-507302 8 ATGAAT 0.89386 87 -
|
|
|
1159 >chr1:5072821-507302 8 ATGAAT 0.89386 21 +
|
|
|
1160 >chr1:9942670-994287 46 TTGAAT 0.891676 162 +
|
|
|
1161 >chr1:7444756-744495 33 TTGAAT 0.891676 134 +
|
|
|
1162 >chr1:7413722-741392 32 TTGAAT 0.891676 123 -
|
|
|
1163 >chr1:6721868-672206 23 TTGAAT 0.891676 85 +
|
|
|
1164 >chr1:6277750-627795 16 TTGAAT 0.891676 35 -
|
|
|
1165 >chr1:6277750-627795 16 TTGAAT 0.891676 25 +
|
|
|
1166 >chr1:6183701-618390 12 TTGAAT 0.891676 87 +
|
|
|
1167 >chr1:6090845-609104 11 TTGAAT 0.891676 119 -
|
|
|
1168 >chr1:6090845-609104 11 TTGAAT 0.891676 115 +
|
|
|
1169 >chr1:5072821-507302 8 TTGAAT 0.891676 155 -
|
|
|
1170 >chr1:9956513-995671 48 GTGATT 0.860082 176 +
|
|
|
1171 >chr1:9932599-993279 45 GTGATT 0.860082 129 -
|
|
|
1172 >chr1:9568576-956877 41 GTGATT 0.860082 22 +
|
|
|
1173 >chr1:9554705-955490 40 GTGATT 0.860082 126 +
|
|
|
1174 >chr1:6472202-647240 20 GTGATT 0.860082 76 +
|
|
|
1175 >chr1:4833767-483396 7 GTGATT 0.860082 188 -
|
|
|
1176 >chr1:3467418-346761 1 GTGATT 0.860082 51 -
|
|
|
1177 >chr1:9956513-995671 48 GTTAAT 0.849088 112 +
|
|
|
1178 >chr1:9932599-993279 45 GTTAAT 0.849088 44 +
|
|
|
1179 >chr1:9574131-957433 42 GTTAAT 0.849088 106 +
|
|
|
1180 >chr1:9554705-955490 40 GTTAAT 0.849088 49 +
|
|
|
1181 >chr1:9013525-901372 37 GTTAAT 0.849088 173 +
|
|
|
1182 >chr1:6721868-672206 23 GTTAAT 0.849088 172 -
|
|
|
1183 >chr1:4662531-466273 5 GTTAAT 0.849088 159 -
|
|
|
1184 >chr1:9942670-994287 46 GTCAAT 0.847655 91 -
|
|
|
1185 >chr1:7768736-776893 34 GTCAAT 0.847655 76 +
|
|
|
1186 >chr1:7444756-744495 33 GTCAAT 0.847655 10 +
|
|
|
1187 >chr1:7209035-720923 26 GTCAAT 0.847655 123 +
|
|
|
1188 **********
|
|
|
1189
|
|
|
1190 20) AATACA (TGTATT) 1.564
|
|
|
1191
|
|
|
1192 Matrix: MAT20 AATACA
|
|
|
1193 A 0.8268 0.7796 0.1396 0.6772 0.1349 0.8374
|
|
|
1194 C 0.05488 0.04317 0.05118 0.06514 0.7076 0.03498
|
|
|
1195 G 0.04696 0.05148 0.06801 0.08048 0.04932 0.01976
|
|
|
1196 T 0.0714 0.1257 0.7412 0.1771 0.1081 0.1079
|
|
|
1197
|
|
|
1198 OCCURRENCES:
|
|
|
1199 >chr1:9962925-996312 49 AATACA 1 83 +
|
|
|
1200 >chr1:9956513-995671 48 AATACA 1 68 +
|
|
|
1201 >chr1:9948240-994844 47 AATACA 1 84 -
|
|
|
1202 >chr1:9942670-994287 46 AATACA 1 156 +
|
|
|
1203 >chr1:9574131-957433 42 AATACA 1 48 -
|
|
|
1204 >chr1:7768736-776893 34 AATACA 1 126 -
|
|
|
1205 >chr1:5072821-507302 8 AATACA 1 43 -
|
|
|
1206 >chr1:4024990-402519 2 AATACA 1 173 -
|
|
|
1207 >chr1:3467418-346761 1 AATACA 1 114 -
|
|
|
1208 >chr1:3467418-346761 1 AATACA 1 27 +
|
|
|
1209 >chr1:3467418-346761 1 AATACA 1 5 +
|
|
|
1210 >chr1:9956513-995671 48 AATTCA 0.883548 78 +
|
|
|
1211 >chr1:9942670-994287 46 AATTCA 0.883548 163 -
|
|
|
1212 >chr1:9013525-901372 37 AATTCA 0.883548 116 +
|
|
|
1213 >chr1:8851545-885174 36 AATTCA 0.883548 85 +
|
|
|
1214 >chr1:7303541-730374 27 AATTCA 0.883548 56 +
|
|
|
1215 >chr1:6878570-687877 25 AATTCA 0.883548 86 -
|
|
|
1216 >chr1:6878570-687877 25 AATTCA 0.883548 54 -
|
|
|
1217 >chr1:6721868-672206 23 AATTCA 0.883548 72 +
|
|
|
1218 >chr1:6437830-643803 19 AATTCA 0.883548 129 +
|
|
|
1219 >chr1:6277750-627795 16 AATTCA 0.883548 28 +
|
|
|
1220 >chr1:6277750-627795 16 AATTCA 0.883548 26 -
|
|
|
1221 >chr1:6266967-626716 15 AATTCA 0.883548 16 -
|
|
|
1222 >chr1:6090845-609104 11 AATTCA 0.883548 118 +
|
|
|
1223 >chr1:6090845-609104 11 AATTCA 0.883548 116 -
|
|
|
1224 >chr1:5072821-507302 8 AATTCA 0.883548 154 +
|
|
|
1225 >chr1:9956513-995671 48 AATATA 0.860396 155 -
|
|
|
1226 >chr1:9942670-994287 46 AATATA 0.860396 119 -
|
|
|
1227 >chr1:9813405-981360 44 AATATA 0.860396 31 +
|
|
|
1228 >chr1:9013525-901372 37 AATATA 0.860396 78 +
|
|
|
1229 >chr1:7768736-776893 34 AATATA 0.860396 2 +
|
|
|
1230 >chr1:7413722-741392 32 AATATA 0.860396 87 -
|
|
|
1231 >chr1:7413722-741392 32 AATATA 0.860396 85 +
|
|
|
1232 >chr1:6472202-647240 20 AATATA 0.860396 2 -
|
|
|
1233 >chr1:6360131-636033 17 AATATA 0.860396 26 +
|
|
|
1234 >chr1:9813405-981360 44 ATTACA 0.84772 147 +
|
|
|
1235 >chr1:6878570-687877 25 ATTACA 0.84772 38 -
|
|
|
1236 >chr1:6719561-671976 22 ATTACA 0.84772 127 +
|
|
|
1237 >chr1:6588721-658892 21 ATTACA 0.84772 140 -
|
|
|
1238 >chr1:6090845-609104 11 ATTACA 0.84772 89 -
|
|
|
1239 >chr1:5805347-580554 10 ATTACA 0.84772 147 +
|
|
|
1240 >chr1:5805347-580554 10 ATTACA 0.84772 125 +
|
|
|
1241 >chr1:4833767-483396 7 ATTACA 0.84772 107 -
|
|
|
1242 >chr1:4774948-477514 6 ATTACA 0.84772 9 -
|
|
|
1243 >chr1:7388801-738900 31 AATACT 0.830134 75 +
|
|
|
1244 >chr1:7209035-720923 26 AATACT 0.830134 10 +
|
|
|
1245 >chr1:6262414-626261 14 AATACT 0.830134 181 -
|
|
|
1246 >chr1:5805347-580554 10 AATACT 0.830134 152 -
|
|
|
1247 >chr1:4833767-483396 7 AATACT 0.830134 18 -
|
|
|
1248 >chr1:4402453-440265 3 AATACT 0.830134 177 -
|
|
|
1249 **********
|
|
|
1250
|
