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comparison 2.4/script/whbkwmtj.sc.direction.bed.sc.merge.bed @ 13:e3609c8714fb draft

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author plus91-technologies-pvt-ltd
date Fri, 30 May 2014 03:37:55 -0400
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12:980fce54e60a 13:e3609c8714fb
1 chr1 40524 40527 CTTTTGAGCCGAT|left;GTACTACCTTGTCACTTTTGAGCCGAT|left;TCCTTCAGAGCCAGTACTACCTTGTCCCTTTTGAGCCGAT|left;TGCCTCCTTCAGAGCCAGTACTACCTTGTCACTTTTGAGCCGAT|left;TACCTTGTCACTTTCGAGCCGAT|left;CTCCTTCAGAGCCAGTACTACCTTGTCACTTTTGAGCCGAT|left;CAGAGCCAGTACTACCTTGTCACTTTTGAGCCGAT|left;CAGTACTACCTTGTCACTTTTGAGCCGAT|left
2 chr1 40524 40527 AGCCAGTAC|right;GCCAGTACTACCTTGTCACTTTTGAGCCGATCTT|right;GCCAGTACTACCTTGTCACTTTTGAGCCGATCTTG|right;GCCAGTACTACCTTGTCACTTTTGAGCCGATCTTGTACTTA|right;GCCAGTACTACCTTGTCACTTTTGAGCCGATCTTGTACTTAAAA|right
3 chr1 56197 56199 ATGATTAAT|left;GAGTCAT|left
4 chr1 56197 56199 CTTCAG|right
5 chr1 127482 127483 CACAAACATGTTCAG|left;ATATAACTCACAAACATGTTCAG|left;AATATAACTCACAAACATGTTCAG|left
6 chr1 163339 163340 AGAATGGG|right;AAAATGGGTCTTAACTGGCTATGTGA|right
7 chr1 261943 261944 TACATGTTCA|right;TACATGTTCAC|right
8 chr1 524428 524430 GGGAGATTGCGGTGAGCGGAGAGC|right;GGAGATTGCGGTGAGCGGAGAGCGCACCATT|right
9 chr1 525966 525967 AAAGACGCTCTCCTTGACCAAACTCCATTCAGGCTCCTTTG|left;CATTCAGGCTCCTTTG|left;CTCCTTTG|left;CTCCTTTG|left;CTCCTTGACCAAACTCCATTCAGGCTCCCTTG|left;AGACGCTCTCCTTGACCAAACTCCATTCAGGCTCCTTTG|left;TCCTTGACCAAACTCCATTCAGGCTCCTTTG|left;ATTCAGGCTCCTTTG|left;ATTCAGGCTCCTTTG|left;AGGCTCCTTTG|left;TCAGGCTCCTTTG|left
10 chr1 711513 711514 ATTACGAGAT|left;ACGAGAT|left;CGAGAT|left
11 chr1 711515 711516 CGAGATCAGG|right;CGAGATC|right;CGAGATCA|right
12 chr1 754036 754040 GTCGGGCCTGCATTCATCTCTCTAGGGCAACGTC|right;TCGGGCCTGCATTCATCTC|right;TCGGGCCTGCATTCATC|right;TCGGGCCTGCATTTATC|right;TCGGGCCTGCATTCATC|right;CGGGCCTGCATTCTTCTCTCTAGGGCAACGTCGGCT|right;CGGGCCTGCATTCATCTCTCTAGGGCAACGTCGGCT|right;CGGGCCTGCATTCATCTCTCTAGGGCAAC|right;CGGGCCTGCATTCATCTCTCTAGGGCAACGTCGGCTGC|right;CGGGCCTGCATTCATCTCTCTAGGGCAACGTCGGCTGCAGC|right;CGGGCCTGCATTCATCTCTCTAGGGCAACGTCGGCTGCAGCT|right;CGGGCCTGCATTCATCTCTCTAGGGCAACGTCGGCTGCAGCTG|right;CGGGCCTGCATTCATCTCTCTAGGGCAACGTCGGCTGCAGCTG|right;CGGGCC|right;CGGGCCT|right;CGGGCCTG|right;CGGGCCTGC|right;AGGCCTGCATTCCTCTCTCTAGG|right;GGGCCTGCATTCATCTCTCTAGGGCAACG|right;GGGCCTGCATT|right;GGGCCAGCATTCATCTCTCTA|right;GGGCCTGCATTCATCTCTCTAGGGCAACGT|right;GGGCCTGCATTCATCTCTCTAGGGCAA|right;GGGCCTGCATTCATCTCTCTAGG|right;GGGCCTGCA|right;GGGCCTGCATTCATCTCTCTA|right
13 chr1 754079 754080 TAGAATATTGTTACATAAAAGTC|left;AGAATATTGTTACATAAAAGTC|left;GTTACATAAAAGTC|left;TGTTACATAAAAGTC|left;TAAAAGTC|left;TGTTGTAAATATTAGAATATTGTTACATAAAAGTC|left;TTACATAAAAGTC|left;TAAATATTAGAATATTGTTACATAAAAGTC|left;CATAAAAGTC|left;AAAAGTC|left;TGTTACATAAAAGTC|left;TTGTTACATAAAAGTC|left;ACCTAAAAGTC|left;TAGAATATTGTTACATAAAAGTC|left;AATATTAGAATATTGTTACATAAAAGTC|left;AATATTAGAATATTGTTCCATAAAAGTC|left;TGTTGTAAATATTAGAATATTGTTACATAAAAGTC|left;TAATGTTGTAAATATTAGAATATTGTTACATAAAAGTC|left;TTAGAATATTGTTACATAAAAGTC|left;TAAAAGTC|left;TACATAAAAGTC|left;TAAAAGTC|left;ATTGTTACATAAAAGTC|left;TTGTAAATATTAGAATATTGTTACATAAAAGTC|left;GATTAATGTTGTACATATTAGAATATTGTTACATAAAAGTC|left;ATTAGAATATTGTTACAGAAAAGTC|left
14 chr1 771752 771755 CTCTGCCT|right;CTCTGCCTGG|right;CTCTGCCTGG|right;CGCTGCCTGGAGTACCTC|right;CTCTGCCTG|right;CTCTGCCTG|right;CTCTGCCTGG|right;TCAACCTGGAGT|right;CTGCCTGGAGT|right;CTGCCTGGAGTATCTCCA|right;CTACCTGGAGTACCTCC|right;CTGCCTGGAGTA|right;CTGCCTGGAG|right;CTGCCTGGA|right
15 chr1 771763 771764 CGGGGCCTTTG|left;CGGGGCCTTTG|left;GCCTTTG|left
16 chr1 773903 773905 GACTGGCTTCTTTCACT|left;TTCAGACTGGCTTCTTTCACT|left;CTTTTCAGACTGGCATCTTTCACT|left;GGCTTCTTTCACT|left;TTCACT|left;CTGGCTTCTTTCACT|left;TAGCCTTTTCAGACTGGCTTCTTTCACT|left;TGTAGCCTTTTCAGACTGGCTTCTTTCTCT|left;GTGTAGCCTTTTCAGACTGGCTTCTTTCACT|left;GGTGTAGCCTTTTCAGACTGGCTTCTTTCACT|left;GCTTCTTTCACT|left;ACTGGCTTCTTTCACT|left;GACAGGCTTCTTTCACT|left
17 chr1 773903 773905 AACCATTTATGCATTTAAA|right
18 chr1 773907 773908 ATTTATGCA|right;ATTTATGC|right;ATTTATG|right;ATTTATGCATTTAA|right;ATTTATGCATTTAAAGTTCCCCCATATTTTTTC|right;ATTTATGCATTTAAAGTTCCCCCATATTTTTT|right;ATTTATGCATTTAAAGTTC|right
19 chr1 773965 773968 TAATTCTGCTTTTTCCA|left;CTTTTTCCA|left;AATTCTGCTTTTTCCA|left;TTTCCA|left;AGGCCTTATCTTTCACTGTGTTGGTAATTCTGCTTTTTCCA|left;TTATCTTTCACTGTGTTGGTAATTCTGCTTTTTCCA|left;GCTTTTTCCA|left;CACTGTGATGGTAATTCTGCTTTTTCCA|left;CTTATCTTTCACTGTGTTGGTAATTCTGCTTTTTCCA|left;GTAATTCTGCTTTTTCCA|left;TGTCTTGGTAATTCTGCTTTTTCCA|left;TTTCACTGTGTTGGTAATTCTGCTTTTTCCAG|left
20 chr1 773965 773968 TGGGATGTCCTG|right;TGGGATGTCCTG|right;GGATGTCCTGTAGTTGGA|right;GGATGTCCTGTAGT|right;GGATGTCCTGTAGT|right
21 chr1 781562 781564 GGTTTTCTCTG|left;ATCTGTGGCTTTCTCTG|left;GTGGTTTTCTCTG|left;TGTGGTTTTCTCTG|left;GTTTTCTCTG|left
22 chr1 781562 781564 TGGCTCTCTG|right;TGGCTCTCTGTTAAGCTTCTGCTG|right
23 chr1 781565 781566 GCTCTCTGTTA|right;GCTCTCTGTT|right;GCTCTCTGTTAA|right;GCTCTCTGTGAAGCTTCT|right;GCTCTCTGTTAAGCTTCTGCTGGT|right;GCTCTCTGTTAAGCTTCTGCTGGTCTGTCTCTCT|right;GCTCTCTGTTAAGCTTCTGCTGGTCTGTCTCTCTT|right;GCTCTCTGTTAAGCTTCTGCTGGTCTGTCTCTCTT|right;GCTCTCTGTTAAGCTTCTGCTGGTCTGTCTCTCTTTGGTGTC|right;GCTCTCTGTTAAGCTTCTGCTGGTCTGTCTCTCT|right
24 chr1 781621 781625 TCTGATATTGCTCCTCAGAGGG|left;GATATTGCTCCTCAGAGGG|left;CTCCTCAGAGGG|left;GATATTGCTCCTCAGAGGG|left;GCTTAGGGACGTAGCTCTGATATTGCTACTCAGAGGG|left
25 chr1 781621 781625 TCCCACGGCCTTGGACTAGCACACAGTCTCTCC|right;CCCACAGCCT|right;CCACAGCCTTGGACTAGCACACAGTCT|right;CCACAGCCTTGGACTAGCACACAGTCTCTCCGACCAC|right;CCACAGCCTTGGACTAGCACAC|right;CCACAGCTTTGGAC|right;CACAGCATTG|right;CACAGCCTTGGACTAGCACACAG|right;CACAGCCTTGGACTAGCACACAGT|right;CACAGCCTTGGA|right;CACAGCCTTGGACTAG|right;CACAGCCTTGGACTAGCACACAGTCTCTCCGACCACCTGTGG|right
26 chr1 813538 813539 CTTTCTTA|left;CTTTCTTA|left
27 chr1 813646 813647 TATAGTTATTAAAC|left;TAGGTTACACATTTTATGTCTAAAAATATAGTTATTAAAC|left;GGTTACACATTTTATGTCTAAAAATATAGTTATTAAAC|left;ATAGTTATTAAAC|left;ATATAGTTATTAAAC|left;TCTAAAAATATAGTTATTAAAC|left
28 chr1 813648 813650 TATAGTTATTAAACGCC|left
29 chr1 813648 813650 ACCCAAGAATGGATAAA|right;ACCCAAGAATGGATAAAA|right;ACCCAAGAATGGATA|right;ACCCAAGAATGGATA|right;ACCCAAGAA|right;ACCCAAGAATGGATAAAA|right;ACCCAAGAATGGATAAAA|right;ACCCAAGAATGGATAAATGAAGAAA|right;ACCCAAGAATGGATAAAAAAAGAAATCACAAGAG|right;ACCCAAGAATGGATAAAAGAAGAAATCACAAGAGA|right
30 chr1 816789 816793 ACACTAGCTGCAAACAAGGCCACTGAATGTCACAGC|left;AGGCCACTGAATGTCACAGC|left;CATCACACTAGCTGCAAACAAGGCCACTGAATGTCACAGC|left;ATGTCACAGC|left;CACAGC|left;CACAGC|left;TGAATGTCACAGC|left;AAACAAGGCCACTGAATGTCACAGC|left;AAACAAGGCCACAGAATGTCACAGC|left;CTGCAAACAAGGCCACTGAATGTCACAGC|left;CAAGGCCACTGAATGTCACAGC|left;ATGTCACAGC|left
31 chr1 816789 816793 GGTAGGTG|right;GGTAGGTG|right;TAGGTGGCTGGCATGTCTGTGAAGGGCAGAAACT|right;TAGGTGGCT|right;TAGGTGGCTG|right;TAGGTGGCTG|right;TAGGTGGCTGGCATGTCT|right;TAGGTGGCTGGCAT|right;TAGGTGGCTGGCATGTCTG|right;AGGTGGCTGGCATGTCTGTGAAGGGCAGAAACTGGGG|right;AGGTGGC|right;AGGTGGCTGG|right;AGGTGGCTGGCATGTCTGTGAA|right;AGGTGGCTGGCATGTCTGTGAAGGGC|right;AGGTGGCTGGCATGTCTGTGAAGGGCAG|right;AGGTGGCTGGCATGTCTGTGAAGGGCAGAAACTGG|right
32 chr1 855227 855231 GGATGCCTGTAGTCCCAGC|right;CATGCCTGTAGTCCCA|right;ATGCCTGTAGTCCCAGCTA|right;ATGCCTGTAG|right;ATGCCTGTA|right;ATGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGC|right;TTGCCTGTAGTCCCAGCTACTTGGGAGGCT|right;ATGCCTGTAGTCCCAGCTACTTGGGAGG|right;TGCCTGTAGTC|right;TGCCTGTAGTCCCAGCTACTTGG|right;TGCGTGTAGTCCCCGCTACTTGGGAGGCTG|right;TGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATG|right;TGCCTGTAGTCCCAGCTACT|right;TGCCTGT|right;TGCCTGT|right;TGCCTGTAGTCCCAGC|right;TGCCTGTAGTCCCAGCT|right;TGCCTGTAGTCCCAGC|right
33 chr1 863642 863643 CCCGGTCCCCTCCACAACCCGGGCCAGGTCCAGGCTGCA|left;GGCCAGGTCCAGGCTGCA|left;GGTCCCCTCCACAACCCGGGCCAGGTCCAGGCTGCA|left;GGTCCCCTCCACAACCCGGGCCAGGTCCAGGCTGCA|left;CCCTCCACAACCCGGGCCAGGTCCAGGCTGCA|left;ACGCGGGCCAGGTCGAGGCTGCA|left;GTCCCCTCCACAACCCGGGCCAGGTCCAGTCTGCA|left;GGCTGCA|left;GGTCCCCTCCACAACCCGGGCCAGGTCCAGGCTGCA|left;CGGGCCAGGTCCAGGCTGCA|left;CCCCTCCACAACCCGGGCCAGGTCCAGGCTGCA|left;CAACCCGGGCCAGGTCCAGGCTGCA|left;TCCAGGCTGCA|left;CAGGCTGCA|left;GGCTGCA|left;GCCAGGTCCAGGCTGCA|left
34 chr1 872231 872233 TGAGTGAGCGG|right;GAGTGAGC|right
35 chr1 891135 891137 CTTCTCAGGGTCCCCA|right;TTCTCAG|right;TTCTCAGGGTCCCCAAGAGGA|right;TTCTCAGGGTCCCCAAGAAG|right;TTCTCAGGGCCCCCAAGAAG|right;TTCTCTGGGTCCCCAAGAAG|right;TTCTCAGGGTCCCCAAGAA|right;TTCTCAGGGTCCCCAAG|right;TTCTCAGGGTCCCCAA|right;TTCTCAGG|right;TTCTCAGGGTCCCCAAGAAGACGC|right;TTTTCA|right;TTCTCA|right;TTCTCAGGGTCCCCAAGAAGAAG|right;TTCTCAAGGTCCCCAAGAAGACGC|right;TTCTCAGGGTCCCCAAGAAGACGCT|right;TTCTCAGGGTCCCCAAGAAGACGCTGTC|right;TTCTCAGGGTCCCCAAGAAGACGCTGGCT|right;TTCTCAGGGTCCCCAAGAAGACGCTGGCTC|right;TTCTCAGGGTCCCCAAGAAGACGCTGGCTCTGTT|right;TTCTCAGGGTCCCTAAGAAGACGCTGGCTCTGTTG|right;TTCTCAGGGTCCCCAAGAAGACGCTGGCTCTGTTG|right;TTCTCAGGGTCCCCAAGAAGACGATGGGTCTGTTGCC|right;TTCTCAAGGTCCCCAAGAAGAC|right
36 chr1 891169 891170 GGGGCCGCTCCAACTGGCCCCAAGTG|left;TGGGGCCGCTCCAACTGGCCCCAAGTG|left;CAAGTG|left;GGCCGCTCCAACTGGCCCCAAGTG|left;GCTCCAACTGGCCCCAAGTG|left;TCCAACTGGCCCCAAGTG|left;TGGGCCCAAGTG|left;CAAGTG|left;TCCAACTGGCCCCAAGTG|left;CTCCAACTGGCCCCAAGTG|left;CAAGTG|left;CCAAATGGCCCCAAGTG|left;GGCCGCTACAACTGGCCCCAAGTG|left;TGGGGCCGCTCCAACTCGCCCCAAGTG|left;GGTGGGGCCGCTCCAACTGGCCCCAAGTG|left;GGGACGCTCCAACCGGCCCCAAGTG|left;GAAAGAAGGTGGGGCCGCTCCAACTGGCCCCAAGTG|left;GCCGCTCCAACTGGCCCCAAGTG|left;CTTCAACTGGCCCCAAGTG|left;GCTCCAAGTG|left;CCAAGTG|left;GGCCCCAAGTG|left
37 chr1 903615 903616 ACCAGATGCAGAG|left;GGTCCGGCGTCTTCTGGAGACCAGATGCAGAG|left;CTGGAGACCAGATGCAGAG|left;CAGATGCAGAG|left;GCAGAG|left;TGCAGAG|left;TGGAGACCAGATGCAGAG|left;AGATGCAGAG|left;AGACCAGATGCAGAG|left;TGGAGACCAGATGCAGAG|left
38 chr1 903615 903616 TTGCTT|right
39 chr1 903617 903618 GCTTCTGCAGGG|right;GCTTCTGCAGGGTCCTGCC|right;GCTTCTGCAGGGCCCTGC|right;GCTTCTG|right;GCTTCTGCATGGCCCTGCCCC|right;GCTTCTGCAGGGCGCTGCCCCA|right;GCTTCTGCAGGGCCCTGCCCCACGGCCCC|right;GCTTCTGCAGGGCCCTGCCCCACGGCCCCC|right;GCTTCTGCAGGGCCCTGCCCCACGGCCCCCTGGTGAGC|right;GCTTCTGCAGGGCCGTGCG|right;GCTTCTGCAGGG|right;GCTTCTGC|right;GCTTCTGCAG|right
40 chr1 915989 915990 TGCCCTGGCCAAGCTTAGCTGCCCCTGAGCAGGCCCAGG|left;AGCTGCCCCTGAGCAGGCCCAGG|left;TGAGCAGGCCCAGG|left;CCCTGAGCAGGCCCAGG|left;TGAGCAGGCCAGGG|left;AGGCCCAGG|left;GCTGCCCCTGAGCAGGCCCAGG|left;GCAGGCCCAGG|left;AGCTGCCCCTGAGCAGGCCCAGG|left;GAGCAGGCCCAGG|left;AGCTGCCCCTGAGCAGGCCCAGG|left;GGCCCAGG|left
41 chr1 915989 915990 GCAATGTGAACAGACAGACGCATGGCTTTCCCGGCCT|right;GCAATGTGAACAGACAGACGCATGGCTTTCCCGGCCTTCTGCCT|right
42 chr1 915991 915992 AATGTGAACAGACAGAC|right;AATGTGAACAGACAGACGCATGGCTTTCCCG|right;AATGTGAACAGACAGACGCATGGCTTT|right;AATGTGAACAGACAGACGCATGGCTTTCCCG|right;AATGTGAACAGACAGACGCATGGCTTTCCCGGCCTT|right;AATGTGAACAGACAGACGCATGGCTTTCCCGGCCTTC|right;AATGTGAACAGACAGAC|right;AATGTGAACA|right;AATGTG|right;AATGTGAACAGACAGACGCATGGCTTTCCCGGCCTTCT|right;AATGTGAACAGAC|right;AATGTGAACAGACAGAC|right
43 chr1 938004 938005 ATCGCA|left;GATGGCA|left;CACGATGGCA|left;AGCCATGGGAACAGCAAGCAAGACCTCACGATGGCA|left;ATGGGAACAGCAAGCAAGACCTCACGATGGCA|left;ATGGCA|left
44 chr1 938009 938010 GCCACACCCTCCACATCCGCAGAAGC|right;GCCACACCCTCCACATCCGCAGA|right;GCCACATCCTCCAC|right;GCCACACCCTCC|right
45 chr1 958306 958307 AAAAAGTAGAATCTCCT|left;AAAAGAAAAAAAAAAAGTAGAATCTCCT|left;GTAGAATCTCCT|left;AAAAAGTAGAATCTCCT|left;ACTCCGTCTCAAAAAAGAAAAAAAAAAAGTAGAATCTCCT|left;AGTAGAATCTCCT|left;AAAGTAGAATCTCCT|left;AGTAGAATCTCCT|left;TAGAATCTCCT|left;AGTAGAATCTCCT|left
46 chr1 958311 958312 AAGACCAGCCTGGCCAACACAGTGAAACCCCATCT|right;AAGACCA|right;AAGACAA|right;AAGACCAGCCT|right;AAGACCAGCCTG|right;AAGACCAGCCTGGCCAAC|right;AAGACCAGCCTGGCCAACACA|right;AAGACCAGCCTGGCCAACACAGTGAAAC|right;AAGACCAGCCTGGCCAACACAGTGAAACCCC|right;AAGACCAGCCTGGCCAACACAGTGAAACCCCATC|right;AAGACCAGCCTG|right