Mercurial > repos > pmac > map_chromosomes
diff tool-data/map_chromosomes.loc.sample @ 0:e60f92a8e1c8 draft default tip
Uploaded
| author | pmac |
|---|---|
| date | Wed, 01 Jun 2016 03:48:29 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/map_chromosomes.loc.sample Wed Jun 01 03:48:29 2016 -0400 @@ -0,0 +1,23 @@ +#This file lists the locations and dbkeys of all the mapping files +# +# Mapping files can be optained using 'git clone https://github.com/dpryan79/ChromosomeMappings.git' +# See https://github.com/dpryan79/ChromosomeMappings +# +#<unique_build_id> <dbkey> <file_path> +# +# +#Contains one entry per file. +# +# +#BDGP6_ensembl2UCSC dm6 ensembl to UCSC /galaxy/ChromosomeMappings/BDGP6_ensembl2UCSC.txt +#BDGP6_UCSC2ensembl dm6 UCSC to ensembl /galaxy/ChromosomeMappings/BDGP6_UCSC2ensembl.txt +#dm3_ensembl2UCSC dm3 ensembl to UCSC /galaxy/ChromosomeMappings/dm3_ensembl2UCSC.txt +#dm3_UCSC2ensembl dm3 UCSC to ensembl /galaxy/ChromosomeMappings/dm3_UCSC2ensembl.txt +#GRCh37_ensembl2UCSC hg19 ensembl to UCSC /galaxy/ChromosomeMappings/GRCh37_ensembl2UCSC.txt +#GRCh37_UCSC2ensembl hg19 UCSC to ensembl /galaxy/ChromosomeMappings/GRCh37_UCSC2ensembl.txt +#GRCh38_ensembl2UCSC hg38 ensembl to UCSC /galaxy/ChromosomeMappings/GRCh38_ensembl2UCSC.txt +#GRCh38_UCSC2ensembl hg38 UCSC to ensembl /galaxy/ChromosomeMappings/GRCh38_UCSC2ensembl.txt +#GRCm37_ensembl2UCSC mm9 ensembl to UCSC /galaxy/ChromosomeMappings/GRCm37_ensembl2UCSC.txt +#GRCm37_UCSC2ensembl mm9 UCSC to ensembl /galaxy/ChromosomeMappings/GRCm37_UCSC2ensembl.txt +#GRCm38_ensembl2UCSC mm10 ensembl to UCSC /galaxy/ChromosomeMappings/GRCm38_ensembl2UCSC.txt +#GRCm38_UCSC2ensembl mm10 UCSC to ensembl /galaxy/ChromosomeMappings/GRCm38_UCSC2ensembl.txt