Mercurial > repos > portiahollyoak > breakdancer

comparison breakdancer.xml @ 1:8c1e654262b1 draft default tip

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planemo upload for repository https://github.com/portiahollyoak/Tools commit 1f1c277219ca756c9baa453592b455597fd593d8-dirty
author portiahollyoak
date Fri, 13 May 2016 12:16:39 -0400
parents 694cbef83948
children
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0:694cbef83948 1:8c1e654262b1
62 <param name="allele_freq" type="boolean" checked="false" truevalue="-h" falsevalue="" 62 <param name="allele_freq" type="boolean" checked="false" truevalue="-h" falsevalue=""
63 label="Print out Allele Frequencing column (Default= No)"/> 63 label="Print out Allele Frequencing column (Default= No)"/>
64 <param name="output_score_filter" type="integer" value="30" label="Output Score filter"/> 64 <param name="output_score_filter" type="integer" value="30" label="Output Score filter"/>
65 </inputs> 65 </inputs>
66 <outputs> 66 <outputs>
67 <data name="results_bed" type="data" format="bed" help="BED file containing SVs and supporting reads" label="${sample_name}.bed"/> 67 <data name="results_bed" type="data" format="bed" help="BED file containing SVs and supporting reads" label="${sample_name}"/>
68 </outputs> 68 </outputs>
69 <tests> 69 <tests>
70 <test> 70 <test>
71 <param name="input_file" value="X_Hum1.bwa.bam" ftype="bam"/> 71 <param name="input_file" value="X_Hum1.bwa.bam" ftype="bam"/>
72 <param name="mean" value="227"/> 72 <param name="mean" value="227"/>