Mercurial > repos > portiahollyoak > change_fasta_header_using_tabular_file

diff test-data/genbank_input.fasta @ 0:540425dc9746 draft default tip

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planemo upload for repository https://github.com/portiahollyoak/Tools commit 132bb96bba8e7aed66a102ed93b7744f36d10d37-dirty
author portiahollyoak
date Fri, 22 Apr 2016 12:07:53 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/genbank_input.fasta	Fri Apr 22 12:07:53 2016 -0400
@@ -0,0 +1,4 @@
+>RT1C
+GGGGACGCGCGCGAGTAGCCGTGTGAATCGAGTTGGCGCTCCTGGAAAACCCCAAAATTTTCCGTGTCGCGGCGGCTTGATGGAGACAGGAGTGGCTGTCTCTAACACACAGTGCCGATATGAGTACTCACCAGCAGTGGGCAAGCTCCAAGTATCCATGGATCGCCCGCCGGCGCCGATCCTCAGGGCCATGGAGCAGGTCAGGGTGAGAGAAGCAGCGAACTTTCTCTGCACTACTTTCTCTTTGTCGCTGTGTTGTTTCTTTTGGCGTCTTGGCTGCCACCAGACTTGCCGGTCACGCCAGCTGATCTCGCAGTCAGCTTGGAAAGCAGTGCTGGTAAACGGCTAAAGCACCGCGGTCTGGCAGCGCTGGTCGGATGCACGAGTCCCCTAGCACAGGTGAGCCGTTTTCTCGGTGAAAGCACTCACTGACAAAAGCTAGCAGCTACGGAAATCGCCTAACGATCGGTTCACCGGTCGTAGCATACATTTTTGGGCGGCTGACGGTTATCCTTGGCAACATCCCATGGAAACCCGGAGACAGATCCATAATCGAGCAGGAGAGGCAGAACAAGAGTGTAAAAAGTCAAGGAGCAGACCAATAGCCAACCCCCCCGCTTAGGCGGCACACTTTAAATCCGGGGCTCTGGCGACCAAGCTGGAGCGGTATATCTCCCACCGTCGCAACTTTCCCCTGCTCACCCACCCCATAAGTCCACGGCGCGTCTGACCCAAAGTGGGCGGGTACGTGGCCTGCGCCTGTTCTCTTTACCAGCCGGGCAGCAGCAAAATAAAAACCCATTCAGCGTCTGAGCCAAGTTGGCCGGCGGAATGGTCTGCGTCTGCGCCGCATCGGCCGGCAGAATATCCAAAACCTGGCGAAAGGTATAAAGCCGCAAACCTGGCAGGAGGTATAAAATGCAACACCTAACTGGAATGTCTGTAAACAACTTTATTACTCCAGGTGGCAGCCACACATGTGGAAATCCACCCTCGGCTAATCCCGAGGCTAGGGCACGGATTCTGGAGGCCCTACCAAACATTCTCCCCAAACCCGCCCCGACGGCGGCACACTTGGCCGTCGGACTAAGCAATGCAACAAGTGCACCCACAACGGACGAAGAAAGCTTGGTGTTTGGGAAAAGGTCAAAGGTCCTAAGGACCCCACCCCAGAACCCGAGCGATGGCACCCCCAAGAGGCCATTAGAAGCGACATCCCCCCTACCAGAGCCCAACCAGCAAAGCGGGTAAAGACCCCCCAGCTAGAAATCGAGGAGATGGGAGCAATCCTGGACGACCTTCTGACGAAGGTCAACCACAACGGGGTGAGGAGCGTCAATCAGGCAATGAAAAACTCATTCGCCAGATTGAAGGAGCTCCAACTAAAGCTGCGCACAAGGCTGCCGGAGGCGGAGAATTCGCATGTCGGACGCACCGCAAGAGCCGATGCTAGCCAACAGACCACCCCTAAGCGCCCCTCCAGCCACGAAGAACCGAGTAAGGGTCCGCGAAGAAAGCCCAGCGATCCGACCACCAGAAGGCAGCGGGACCCAAGCGCCTACCAAGGGCTCCGCCCCAAGCCACTGCAGCGGGAAACAAGACGCAACCAAGATTGCAGCATCCGCCCGGACCGCGCAGGAAGAGACCGCCAAGGGAGAGGCCAGATGCGCTGGTTATCACCCCCTCAGCTGGCTTACCGTACAGCGAAGTGCTGTCGCTGGTCACAAGAGGGCAGGACGCCAGGCTCAGGGCCATCGGGGAGAACGTATCAAGGGTTAAGAGGACGGCCAAAGGCGAACTGCTCCTCGAGCTACGTGCCTCTGCCCAAGACTTGACGCAGAAGCTCAAGATGGACATGGGAGCGGTGCTAGGAGACCGCGCCAGCCTTCGCGCGTTAACTCAATCCAAAGTATTTTTGATTCGCGACCTCGACGAGCTTACTACTGAAGACGAGCTGAGGAGGGTCCTGGAGTCCCGGCATAGATTCCAGCAGCAGTGGTGGCTATCAAGAGCCTCCGTCAAACGCAGTATGGAGGGAAGTCTGCTATAATAGCAGTTCCAGCCAATCTGGCGGACCCGCTGATCAAGCGTGGCAAGCTGAGGGTAGGATGGTCCCAATGTCTGATCAAGGAACTGGAGCCACGCCAAAGATGCTTCAAATGTCTGGAGGAAGGCCACATAGCGGCCCATTGTAGAAGCGCCGTCGACAGAAGCCAGTGCTGCTTCAGATGCGGGTCCGCGGGACACAAGGCCGCAGAGTGTCCCAACGAGGCTAAGTGCTTTTTGTGCGCAAGCAGAGGAAGCCAAGCGACCAACCACCAAGCAGGCACCCGGAAGTGCCCATTGGCGGGCAAAGGAGCACCAAAGGCACCACAATGATGCGTTTGATTCAGCTAAACCTGAATCACTGCACGGCAGCCCAAGACCTGCTAGTGCAGACGGTGCGCGAACGCAGAGTGGAGCTTGCGTTACTTAGCGAGCCCTACCGGACGGCGGACAGCCCAGACTGGGCTTTCGACCGCGCCAAGAAAGCAGCAATCTGGAGGTGCAGCAGAGAAGCCCAACAATTAACCGATGTTTTTTCGGACATCGGGTTTGTTAGGGCAAAGGTGGGCAGATGGTGGGTGTACAGCCGGATGCTAGAGGCCGCACCCAGGTTCTCATAGCTGGCGACTTCAACGCATGGTCAGAGAGCTGGGGCAGTTCAACCACCAACGCGAGAGGCAGGATGGTGCTCGAGGCATTCGCGACGCTGGACCTGGCTCTATTAAACCAAGGGAACCGGCACACGTTCAGGCGTGCCGGACTGGGCTCTGTGGTGGACCTCACCTTCACTAGCGGCTCGTCGTTCAGGCTAACGAGGTGGAGACTCAGCGAGGAATACACTGGCAGTGACCACTTGGCCATCATTTGTGATCTGGGATGCCCTTCCTCGACCCAAGCCCAGCTAGCAGCCCAAGCCAGGATAAAATACAAAACGGACACCCTGGACACGCAGTTATTCCGAGAGCAGTTCCTACCCTCGGTGAGTGGAGAAGGAGCTGAGCTGACGGCAGTGGCGCTGATGAGGCAGCTGAAGACCGCGTGCGACGACAGCATGCAAACAAGCAGGACACATAGCCAACAAAGAGCCCCTGTCTACTGGTGGAACCAGGAGATAGAGACGGCTCGCCGAGAATGCCTCTCCGCCAGACGTCGCTATCAACGCGCTAGAGGTGCGGAGTCCTTTGCCGAACGCCAATCCGAGTATAGAGCCCGCAGGAAAGCACTCAAGCTAGCCATACGGGAGAGCAAGCGGAAATGCTTCCTCGACCTATGCGATTCTGCTGACAGCGACCCATGGGGAAGTGCCTACAAGGTGGTGGTCAAGCAGGCATATACGAGGACTCCCAAGCTACTGGACCCAGCGATGCTCCGCAGTGTAGCGGAACATCTGTTTCCTTTGATGGACAGGTTACGCCCCGCCGACCCAGCCACAGGGGACCACGTCGAAGCCGACGCCACGGTCAGCAGTGAGGAGATCCTGGAGCTGGCGAAACTGCTGAAGGACGGCAAGGCCCCCGGGCCCGACGGCATTCCGATCAGGGCGCTTCGGCTCTCTCTACCTCCAGCCAACTCGTTTGCGAAGGCATTCACCAAGTGCCTGACGGAAGGAGTCTTCCCAAGTTGCTGGAAGGTACAAAAGTGTTGCTCCTCCCAAAACCAGGGAAGCCACCCGAGGAGCCTATATCGTTCCGGCCGATATGCCTCATCGATGGAACTGGCAAGCTCCTGGAGAAACTGGTGTGCATTCGGCTAGAGAGGGCTATCGCAGACGCGGGTGACCTCTCACGGTCCCAGTTTGGCTTCAGGAAAGCGCGGTCCACCGTCGACGCCGTCAACAGAGTGGTCGAAGTAGCGGCCCAAGCAATCGAGGGCACCAGATGGAAGGGGGGTAGCAAAGAGTACTGCCTCATGGTCACACTAGACATCAGGAACGCCTTCAACACAGCGAGGTGGGACCGGATCCTAGAAGCATTAATTGGCTTCGGCGTCCCAGCCTACCTAGTCAGGATCATTCGCAGCTACTTCTCGGATCGGGTCCTACTGTGCGAGTCGTCGGAAGGAGTCTTCAGGCACCAGGTCACCGGTGGAGTCCCGCAAGGCTCGGTTCTCGGCCCGCTTCTGTGGAACACCATGTATGACGGGATACTTCGCCTACCGCTGGTTGGGAGGAGCGAGATCGTAGGCTTCGCGGACGACGTGGCTTTGCTCGTTGTTGACAAGCATCCCGGCAAGGCTGAGGAAAAGTGTAACCAAAACATCAGGGCCATTGAACAATGGCTCAGCTCAATGGGGCTAGAGCTGGCGCCGGAGAAGACGGAGGCTGTCCTGATTAGCTCCAGGAAGGCAGTGGAGACGGCCACTGTCGAAGTAGGCAGTACCTCGGTGTCCTCCTCTCGGGCAATTAAGTACCTGGGAGTCATGATAGACACCAGGCTTTCGTTCCGTGAACACCTAGCCTACGCTAGCTCGAAAGCAGCAGGAGTAAATCGGGCGTTATCAACCATAATGTTGAACACCCGAGGCCCAAAACAGGCGAGTAGACGGCTGCTGACGAGCGTCACCCGCGCGACCATGCTATATGCCGCCCCGGTGTGGGCAAAAGCGCTTGAAACAGAAAGCTACGCCCAGGGCCTAAATGCTACCCATAGACTGTCGGCACTACGTATCTGCTGCGCCTTCAGAACAGTGTCCAACGAGGCGGCATTGGTGATCGCAGGCATACCGCCTCTAGACCTATTAGCGCAGGAAAACAAAGTGGTCTTCAACCAAACCCACGGTAGAAGCCTCTCCCCCTGCGCCAAGAGGTCAATACGAGCAGAAGCAAGGCAGCACACCCTGGAGACATGGCAGCACAGGTGGAACAACGAGCTTAAGGGTCGCTGGACGCATCAGCTGATTCCTAATCTCAAGCCGTGGATAGAACGGAAGCATGGCGAAATAACGTTCCATCTAACGCAGCTGGTCAGTGGGCACGGTTGCTTTCGCAGCTATCTGAAGCGCTTTGGACATGAGGAGGCGGATGATTGCCCATGGTGCGGAAGTGGACGGAGCGAAACCGCAGAGCACGTTCTCTTCTCGTGCGATAAATATGCAAGGGAACGGAGCTCTCTGGAAACCGTACTTGGCAGCAGACTGAATGCGGATAACCTAGTCCCATTCATGCTGCAGGGTGAGGCGGAATGGCAAGCGGTCAACAGCTTCGCCGCAGCGATAACTACCGAGCTCAGAAGAGCCGAGAGAGCCAGGAGGGTCCACGAGTAAGCAAATCTTGATCGTCCTCGCGAAGCAATGCTTCACGGCCATACCGCGGGGGGTTCTGGATTTGCCCTCCTTACTGTTACATTGTTATATTAATTAATCTTAATCTTAAATGTCTAATAAACGAATTAAAAAAAAA
+>RT1B
+GCTGCCAACTTGGCGCAGCGGGCGATCTGGAGAGGGAGGCGTTGCCAGATCAACCGTGTGATCAGTGTTGTGTTGCGACAGTAGAGCGCGAAATTCAAAATTAAACTTAAAATTAAACCGTTGAATTTTAATTTAATTTTAATTTTGATTCTGGTTACTGGGAGCGCACAAGTCTTTAAGAAAGGGGAAAAGGCACAAAGGTCGAGGACAGACCAAATATCATCCTCTCACCGTGCTGGTGCCTAAGCAGAGGCTCTGGTGTCCGAGTCGAGGCGGTACAAACCTCCATCCGTAAAAGCCAGGGGGAAATCCGTGGCCTACGTGGGAACCCCTTTCTAAGGCTGGTGCTTCGCCTAGGTAACCTTAGGCCATCTTTCAGTTGATGGACAGTGCAGTGGGGGGCAGTCCCCCTGATCGGAACGACCCGTTCAGGAGGAGCCCCCGACTTTCGAGATCCCCCACCAGAGGAGTCGGTAACCCGACCCATGGTGACGGAATCTCGGTCCCGTCGGTGGCAAGGGGTGAGCACGCAGGCCCCCAGCCGCCGTTGACTAGCGACTGCAGCGATGCTGTAGAGGTGGAGAACTTGGCTCCTACAGCATCTACGACCGCGACAAGTCAGAAGACGATGGACCACATCGCCGTGCCATCGCAAAAGACGGGAGGGAAGTCCCCAGCTGGTTCCCCTCATCGGTCTTCGGACCTGACCGCGGCTCTCCAGAATGAGGACCTGAGGGGCATACTTACCAGGATGAATGGCAAGATCAGCACCTTGCTATCCGCATTCGAGACCCAACGGCACGTGACACGAGAGACAAAGGGCATAGCTTCCGAACTCTCAGCCCTTAACAACAGGGCGTTAGAGCTGTACAAAGGTACTACTAGCGAGCACCGCTTGAAGAGCAGTGCTACCCAGACGGAGGTACAAAAGCCTACCAAAAAGGCTCCTCAAAATGCACAGGTACCCAAGGTGCAAGTGCCAAAAATCCAGGCGCCCAAGCCGAGCAACCCTACGTTGGGTGGCAACGGTGAAGAAAAGGCAACATCCAGACCAAACGAGTCCAAACCAGGCAGCTACGCATCTGTCGCCAAGAATGCTAGCACGGGTGTAGAGTGGACCAAGGTGAAGCCTACGCGCCTGCGTAAAAAACCGGAGGCACTCATCGTAAAAAAGACAGGAGAGGCTTCGTACGCAGAGATGCTTCGGAAGCTAAGATCGGACCCGAGCCTTAGCGAACTGGGCAGCCACGTGCGAAAAATCCGGAGAACGCAGAAAGGTGAGCTGTTGCTCGAGGTAGAGGGGAAAGCTTCGGAAAGCGTCCCCAAGTTTAAGAGCGACCTGGAAGCGGCGCTCAATGACTTGGCCTCTGTGCGCACAGGAGCGCAAAGAATAGCTCTATCTTGCAGCGGATTGGACGAGGCTACGACAGCAGAGGAGCTCCACAGCTGCTTGGTCGCCCAATTCCAGGGCCTGCAGATAAATCCTGAAGATATCAGGGGCCTTCGCAGAATGCGGGATGGCACGCAAATAGCCTCAGTGCTGCTGAACGCGAACGTTGCGATACCAGTCCTTAAACAGGGCACCATAACCGTTGGATGGTCAAGATGTCGTATCACCCAGGACGTTCGACCCACGAGATGCTACAGGTGTCTCGGCTATGGGCATCGATCAGCAACCTGCAAGAACACTGACAGGGCAGACTGCTGTCTTAGATGCGGTGAGCGTGGGCACAAGGCAAAGGGGTGCGTTGCAGCACCAAAATGCCTGATCTGCAGCAGCGAGGTGGACAGAAACCACTCGACGGGTAGCTTTGCGTGCCCGACCTACAGAGCGACCCTAAAAGAAGCCAAGAGCCACCTTAATGCACACTCATATTAGCGTAGTACAGCTCAATGTCAATCATTGCGCAGCAGCTCAGAGCCTCCTGGCCCAGACTGCGGCTGAGCGCAATGTAGACATCATGCTCCTAAGCGAACCCTACGTCTCTGGTAGCGGACAATCGTCCATGATCCTTGACGAGACAGGTAAAGCAGCTATCAAATGCTGCAGCTCTCTCCACGTCGAGGAACTGGCTGCTTTACCTATGCGGGGTATCGCTTATGCGAAGTTAAAACACGTGCACTTGTACAGCTGCTACGCTCCGCCGAGCGACACCCCCGATCAGTTCGAGGAGTTTCTGGAGGCGCTCGTGGACCATGCGAGAGGGCGAAGCCCGAAGGTCATTGCCGGCGACTTTAATGCCTGGGCAGTGGAATGGGGCAGCAGGACATCCAACACCAGAGGCCGAGCTGTGATTGACGCCATGGGAATGCTGGACCTTATACTGCTGAACGACGGACGGAAGCCGACGTTTAACAACGATAGGGGTACGTCCTTTATTGACGTTACCTTTGTCAGCAGAGGGCTAGTAGACAACAATAACTGGATGGTCCATGACGTCATGACGCTGAGCGACCACGCCCTGATCTCCTTCAGTCTCTCCCCGGAGGACATGCCCAGGAGACGGCAGAGTAGAGCAGTCGGGAAAGCATGGGACACCAGGAAGATCGATGAGGCCATGCTGGCCTATCAGATCAATTCCCTGGAAATCCCAAGTGGGGACGCAGAGAGTATGGCGGCAGGCCTCATGAATATGCTGGGAAGAATCTGCGACGCAATCATGCCAAGGAAAAATAAGGCACAGCGCAAACCACCCGTTTACTGGTGGAGCGCCTCCCTAAGCCAACTACGGTCTGATTGCCTCAGGGCTAGGAGAATGGCGCAACGAGCCAGAGGCAGTACCCACCACGCGGAACTCTTGGAGGCTTTCAGAAGGAAACGTCTAGAGTTCAAGCACGGCATCGCGGCTGCCAAAGCGCGGTCGTTTAAGGAGCTGCAGGATGGCGTAGACAGCGATACCTGGGGCCTCGCCTACAAGCTTGTTACCAAAAAGCTAAGGAGGAGAGCGGCAACCCCATCCGACCCGGGGGTCCTGGCTAACATAGTAGGGGAGCTATTCCCAAAGCAGACCACACTATGGAGGCCAACAGAGGCAGCCCCTGCCCCAGATTTTCCGTGCGTCACAGAACTTGAAGTCGCCGAGGCAGCCAAGCGCATCAAACCCAACAAAGCCCCTGGACTAGATGGTATTCCTGGAGCTGTTATAAAAGCAGTGGCGCTGGGTAGACCTGAAATCTTCAGGGCCACCTTCCAGCAATGCCTTCTGGACGGAATCTTCCCAACAAGGTGGAAAAGCCAGAAGCTAGTCCTGTTGCCGAAAGGCAAGGGACCAGCACATGCTGCAAACAGCTACCGCCCTCTATGCCTACTGGATATAGTAGGAAAACTGTTCGAACGTATCCTGTATACCAGAATAGAGGCAATCACCGAGAGCATCAACGGCCTGGGAAGTCATCAATATGGCTTCCGGAAAGGTAAGAGCACTCTGGACGCTCTTTCGGCCGTTTGTAACATCGCCAAGACCGCTATTTCTGGTGATAGATGGTTAGGGGGCAGGAAGGAATACTGCGCAATTGTGACTCTGGACGTAAGGAACGCTTTCAACACCGCCAGATGGCCCGTAATCCTCGCGGCCATGTACCGTATGGGGATCCCGGAGTACCTAAGGATAGTCGTTGGCAGCTACTTTAGGGACCGGGTCCTATGGTACGATACGGAAGATGGCCCAAAAAGATACCGAGTTTCGGCAGGTGTTCCCCAAGGATCGGTACTTGGACCAATCCTATGGAACATTATGTACGATGGGATCTTGGGCATCAACAGGCCCGTAGGAGTAGAGCTGCATTGTTTTGCTGACGATGTGGCAATCACAGCTGTCTCGAAAACAATCGCAGGGTTGGAAGACAAATGCAACTCTACGATCGGTGCTGCCATCCGCTGGCTCGAGAAAGCCGGGCTAGCAATAGCGGCTCACAAGACCGAAGCAGTCCTACTAAGCAGCAGGAAAAAGGTGGAGAACATGCTGGTCTCCGTCAAGGGTACACAGGTGACCTCTCAAGAGTCCCTAAAGTACCTGGGGGTAATGATAGATCGCAGACTATCGTTCAAGGACCACGCGAGCCACGCCAGCAAGAAGGCAGCAATCACAGCCTCTTCGTTGGCGAGGCTTATGCCCAACGTCGGAGGCCCAAGACACCCGGCCAGGAAACTGCTGGTGTCAGTAGCAAAGGCTTCGCTACTATACGCTGCACCAGTCTGGAGCAATGCCACTGGCAGGGTCTCATACCTGAAAGGAGCTCGTTCGGTGCTACGGTCAATGTCTCTGAGGCTCATTAGAGGTTTCAGGACCATATCCGAAGACGCGGCGCTAGCGCTGGCAGGCCTGCCGCCGATTGATCTGGAGATCAAGGCTCTCAGCCTAATGCGGAGTGGCGCTTCCAGGCAAGAGGCACACGAGTGGCTATTAGGTGAATGGCAGAGTAGATGGCAAACGTCGCGACGGGGGAGGTGGACTTATCAGCTCATCCCAGAGATGACGGTTTGGGCAGAGTGCCAACACAAATGCTTGGACTACCACCTAACCCAGTTCCTCACGGACCATGGCTGCTTCCGGGCCTATCTACTCCGGTTCCGTCACGTAGAGTCAGCCCAATGCTTGTTCTGCGTCGACGGTGAAGAAACAGCAGAACATGTGCTAATGCACTGCTCCAGGTTCACGGCGGAGAGAGAGCAGCTAAAGACGCTGTCAGGTTCCCCGTTCAGCCCTAGTGGCTTGTTCGCGGCTATGATGGCGAACAGGGGGGCTTGGGAGCGGGGACACAGCATTATCATTAATATGATGAAGCGTGTCCGATCAGACGAGATGGCCAACAGAGTGGATGTCTAAGCCCAAACTGGTGTCCTGGGTGACGGCGGGCGAAGAATTCATCCTCAGCGTCCCCGGCTCGTCGTAAAAGGCGACTAAAGGGTGGAAGGAGGAGCCCCCATGGACTACACTGAAGGAAGGGAGTGCGACCTGGCCTCACATCCTGCTCACCGAAGTCATACCTTGACTGGCAGTCCCGGTGAGCGAGCAAGGACTGTAGAGCACGCGGAGGTTTTTGTTTTAGTACGTAGGCATAATTCCAATAGGGCTTATGAATCGTGCATGCCACCTACGGACGGTAGGTGGTATCTTTAGAAGATTTTAATTTTCCTACCGTAAGTCAAATAATAAAAAAAAAAAAAAAAA