Mercurial > repos > ppericard > viscorvar

diff mixomics_blocksplsda.R @ 5:88c1fd2ac110 draft default tip

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"planemo upload for repository https://gitlab.com/bilille/galaxy-viscorvar commit 21d09ff286a496ff475f32626d88dd42423ae663"
author ppericard
date Tue, 07 Sep 2021 10:40:08 +0000
parents c8533e9298e5
children
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--- a/mixomics_blocksplsda.R	Tue Nov 17 13:01:44 2020 +0000
+++ b/mixomics_blocksplsda.R	Tue Sep 07 10:40:08 2021 +0000
@@ -22,7 +22,6 @@
 parser$add_argument('--correlation', dest='correlation', action="store_true",
                     help="Add correlation between all blocks")
 parser$add_argument('--scheme', dest='scheme', default="horst", help="Scheme")
-parser$add_argument('--mode', dest='mode', default="regression", help="Mode")
 parser$add_argument('--maxiter', dest='maxiter', type='integer', default=100,
                     help="Maximum number of iterations")
 parser$add_argument('--scale', dest='scale', action="store_true",
@@ -54,8 +53,6 @@
 print(args$correlation)
 print("Scheme:")
 print(args$scheme)
-print("Mode:")
-print(args$mode)
 print("Max nb of iterations:")
 print(args$maxiter)
 print("Scale:")
@@ -165,7 +162,6 @@
                                 keepX = keepX,
                                 design = design,
                                 scheme = args$scheme,
-                                mode = args$mode,
                                 scale = args$scale,
                                 init = args$init,
                                 tol = args$tol,