Mercurial > repos > ppericard > viscorvar

diff viscorvar_networkvar.R @ 5:88c1fd2ac110 draft default tip

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"planemo upload for repository https://gitlab.com/bilille/galaxy-viscorvar commit 21d09ff286a496ff475f32626d88dd42423ae663"
author ppericard
date Tue, 07 Sep 2021 10:40:08 +0000
parents c8533e9298e5
children
line wrap: on
line diff
--- a/viscorvar_networkvar.R	Tue Nov 17 13:01:44 2020 +0000
+++ b/viscorvar_networkvar.R	Tue Sep 07 10:40:08 2021 +0000
@@ -66,8 +66,9 @@
 print("names_response_variables:")
 print(names_response_variables)
 
-res_networkVar = networkVar(res_compute_mat_similarity = res_compute_mat_similarity,
-                            names_block_variables = names_block_variables,
+res_networkVar = networkVar(res_compute_mat = res_compute_mat_similarity,
+                            type_cor = "similarity",
+                            names_selected_variables = names_block_variables,
                             names_response_variables = names_response_variables,
                             cutoff = 0)
 
@@ -75,4 +76,4 @@
 print("res_networkVar:")
 print(res_networkVar)
 
-write.graph(res_networkVar$gR, file = args$output_graph, format = "graphml")
\ No newline at end of file
+write.graph(res_networkVar$gR, file = args$output_graph, format = "graphml")