Mercurial > repos > proteomisc > preprocess_dataset

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<h1>Preprocessing</h1>
<p>
Preprocessing of an `r datasetsource` DataSet, issued from
`r technology`
technology.
</p>
<h2>Used methods for each step</h2>

<h3>Background correction methods</h3>
<pre>method : `r listArguments[["backgroundcorrection_method"]]`</pre>
<h3>Normalization methods</h3>
<pre>method : `r listArguments[["normalization_method"]]`</pre>
<h3>Summarization methods</h3>
<pre>method : `r listArguments[["summary_method"]]`</pre>
<h2>Boxplots</h2>
<h3>Before NM</h3>
<p>
<br>
<img src="boxplot_before_NM.png" width="100%" height="auto">
<br>
</p>
<h3>After NM</h3>
<p>
<br>
<img src="boxplot_after_NM.png" width="100%" height="auto">
<br>
</p>
<h2>MA plots</h2>
<p>
<br>
<img src="MA_plot.png" width="100%" height="auto">
<br>
</p>
<h2>Densities plot</h2>
<h3>Before NM</h3>
<p>
<br>
<img src="densities_plot_before_NM.png" width="100%" height="auto">
<br>
</p>
<h3>After NM</h3>
<p>
<br>
<img src="densities_plot_after_NM.png" width="100%" height="auto">
<br>
</p>
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author	proteomisc
date	Mon, 11 Dec 2023 19:37:42 +0000
parents	1367e5b24925
children