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annotate test-data/Lacombe_et_al_2017_OK.txt @ 7:6f32c1e12572 draft default tip

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planemo upload commit 72b345a7df2c87f07a9df71ecee1f252c9355337
author proteore
date Fri, 01 Jun 2018 11:10:47 -0400
parents d29e469b6b20
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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1 Protein accession number (UniProt) Protein name Number of peptides (razor + unique)
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2 P15924 Desmoplakin 69
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3 P02538 Keratin, type II cytoskeletal 6A 53
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4 P02768 Serum albumin 44
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5 P08779 Keratin, type I cytoskeletal 16 29
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6 Q02413 Desmoglein-1 24
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7 P07355 "Annexin A2;Putative annexin A2-like protein" 22
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8 P14923 Junction plakoglobin 22
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9 P02788 Lactotransferrin 21
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10 Q9HC84 Mucin-5B 21
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11 P29508 Serpin B3 20
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12 P63261 Actin, cytoplasmic 2 19
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13 Q8N1N4 Keratin, type II cytoskeletal 78 18
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14 Q04695 Keratin, type I cytoskeletal 17 18
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15 P01876 Ig alpha-1 chain C region 16
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16 Q01469 Fatty acid-binding protein 5, epidermal 15
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17 P31944 Caspase-14 15
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18 P01833 Polymeric immunoglobulin receptor 15
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19 P06733 Alpha-enolase 15
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20 P25311 Zinc-alpha-2-glycoprotein 15
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21 Q15149 Plectin 15
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22 P19013 Keratin, type II cytoskeletal 4 13
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23 Q6KB66 Keratin, type II cytoskeletal 80 13
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24 Q08188 Protein-glutamine gamma-glutamyltransferase E 12
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25 P13646 Keratin, type I cytoskeletal 13 11
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26 Q86YZ3 Hornerin 11
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27 P04259 Keratin, type II cytoskeletal 6B 10
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28 P02545 "Prelamin-A/C;Lamin-A/C" 10
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29 P04083 Annexin A1 10
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30 P11021 78 kDa glucose-regulated protein 10
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31 P02787 Serotransferrin 9
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32 P04040 Catalase 9
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33 P31151 Protein S100-A7 9
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34 P31947 14-3-3 protein sigma 9
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35 Q96P63 Serpin B12 9
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36 P14618 Pyruvate kinase PKM 9
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37 P60174 Triosephosphate isomerase 9
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38 Q06830 Peroxiredoxin-1 9
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39 P01040 Cystatin-A 8
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40 P05089 Arginase-1 8
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41 P01834 Ig kappa chain C region 8
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42 P04406 Glyceraldehyde-3-phosphate dehydrogenase 8
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43 P0DMV9 Heat shock 70 kDa protein 1B 8
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44 P13639 Elongation factor 2 8
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45 P35579 Myosin-9 8
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46 P68371 Tubulin beta-4B chain 8
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47 Q8WVV4 Protein POF1B 8
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48 O75635 Serpin B7 7
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49 P01857 Ig gamma-1 chain C region 7
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50 P61626 Lysozyme C 7
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51 P68363 Tubulin alpha-1B chain 7
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52 P01009 "Alpha-1-antitrypsin;Short peptide from AAT" 6
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53 P07900 Heat shock protein HSP 90-alpha 6
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54 Q9NZH8 Interleukin-36 gamma 6
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55 O43707 "Alpha-actinin-4;Alpha-actinin-1" 6
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56 O75223 Gamma-glutamylcyclotransferase 6
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57 P00338 L-lactate dehydrogenase A chain 6
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58 P07339 Cathepsin D 6
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59 P62987 Ubiquitin-60S ribosomal protein L40 6
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60 P10599 Thioredoxin 6
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61 Q9UGM3 Deleted in malignant brain tumors 1 protein 6
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62 Q9UI42 Carboxypeptidase A4 6
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63 P47929 Galectin-7 5
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64 Q13867 Bleomycin hydrolase 5
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65 Q6P4A8 Phospholipase B-like 1 5
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66 O75369 Filamin-B 5
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67 P00441 Superoxide dismutase [Cu-Zn] 5
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68 P04792 Heat shock protein beta-1 5
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69 P11142 Heat shock cognate 71 kDa protein 5
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70 P58107 Epiplakin 5
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71 P60842 Eukaryotic initiation factor 4A-I 5
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72 P62937 Peptidyl-prolyl cis-trans isomerase A 5
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73 P63104 14-3-3 protein zeta/delta 5
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74 Q92820 Gamma-glutamyl hydrolase 5
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75 O75342 Arachidonate 12-lipoxygenase, 12R-type 4
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76 P09211 Glutathione S-transferase P 4
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77 P31025 Lipocalin-1 4
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78 P48594 Serpin B4 4
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79 Q14574 Desmocollin-3 4
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80 Q5T750 Skin-specific protein 32 4
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81 Q6UWP8 Suprabasin 4
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82 O60911 Cathepsin L2 4
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83 P00558 Phosphoglycerate kinase 1 4
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84 P04075 Fructose-bisphosphate aldolase A 4
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85 P07384 Calpain-1 catalytic subunit 4
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86 P0CG05 Ig lambda-2 chain C regions 4
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87 P18206 Vinculin 4
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88 P62258 14-3-3 protein epsilon 4
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89 P68871 Hemoglobin subunit beta 4
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90 Q9C075 Keratin, type I cytoskeletal 23 4
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91 A8K2U0 Alpha-2-macroglobulin-like protein 1 3
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92 P00738 Haptoglobin 3
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93 P01011 Alpha-1-antichymotrypsin 3
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94 P02763 Alpha-1-acid glycoprotein 1 3
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95 P18510 Interleukin-1 receptor antagonist protein 3
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96 P22528 Cornifin-B 3
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97 P30740 Leukocyte elastase inhibitor 3
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98 P80188 Neutrophil gelatinase-associated lipocalin 3
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99 Q15828 Cystatin-M 3
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100 Q9HCY8 Protein S100-A14 3
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101 P01623 Ig kappa chain V-III region 3
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102 P01877 Ig alpha-2 chain C region 3
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103 P06396 Gelsolin 3
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104 P14735 Insulin-degrading enzyme 3
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105 P20933 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase 3
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106 P25788 Proteasome subunit alpha type-3 3
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107 P26641 Elongation factor 1-gamma 3
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108 P36952 Serpin B5 3
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109 P40926 Malate dehydrogenase, mitochondrial 3
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110 Q9Y6R7 IgGFc-binding protein 3
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111 O95274 Ly6/PLAUR domain-containing protein 3 2
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112 P00491 Purine nucleoside phosphorylase 2
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113 P04080 Cystatin-B 2
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114 P09972 Fructose-bisphosphate aldolase C 2
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115 P19012 Keratin, type I cytoskeletal 15 2
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116 P20930 Filaggrin 2
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117 Q96FX8 p53 apoptosis effector related to PMP-22 2
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proteore
parents:
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118 Q9UIV8 Serpin B13 2
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proteore
parents:
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119 P01625 Ig kappa chain V-IV region Len 2
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proteore
parents:
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120 P01765 Ig heavy chain V-III region TIL 2
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proteore
parents:
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121 P01766 Ig heavy chain V-III region BRO 2
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proteore
parents:
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122 P01860 Ig gamma-3 chain C region 2
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proteore
parents:
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123 P01871 Ig mu chain C region 2
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proteore
parents:
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124 P05090 Apolipoprotein D 2
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proteore
parents:
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125 P06870 Kallikrein-1 2
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proteore
parents:
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126 P07858 Cathepsin B 2
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proteore
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127 P08865 40S ribosomal protein SA 2
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proteore
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128 P11279 Lysosome-associated membrane glycoprotein 1 2
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proteore
parents:
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129 P13473 Lysosome-associated membrane glycoprotein 2 2
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proteore
parents:
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130 P19971 Thymidine phosphorylase 2
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proteore
parents:
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131 P23284 Peptidyl-prolyl cis-trans isomerase B 2
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proteore
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132 P23396 40S ribosomal protein S3 2
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proteore
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133 P25705 ATP synthase subunit alpha, mitochondrial 2
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proteore
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134 P27482 Calmodulin-like protein 3 2
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proteore
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135 P31949 Protein S100-A11 2
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proteore
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136 P40121 Macrophage-capping protein 2
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proteore
parents:
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137 P42357 Histidine ammonia-lyase 2
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proteore
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138 P47756 F-actin-capping protein subunit beta 2
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proteore
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139 P48637 Glutathione synthetase 2
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proteore
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140 P49720 Proteasome subunit beta type-3 2
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proteore
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141 P50395 Rab GDP dissociation inhibitor beta 2
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proteore
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142 P59998 Actin-related protein 2/3 complex subunit 4 2
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proteore
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143 P61160 Actin-related protein 2 2
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proteore
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144 P61916 Epididymal secretory protein E1 2
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proteore
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145 P04745 Alpha-amylase 1 23
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proteore
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146 Q9NZT1 Calmodulin-like protein 5 8
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proteore
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147 P12273 Prolactin-inducible protein 6
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proteore
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148 Q96DA0 Zymogen granule protein 16 homolog B 5
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proteore
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149 P01036 Cystatin-S 5
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proteore
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150 Q8TAX7 Mucin-7 2
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proteore
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151 P01037 Cystatin-SN 2
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proteore
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152 P09228 Cystatin-SA 2
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proteore
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153 P04264 Keratin, type II cytoskeletal 1 61
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proteore
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154 P35908 Keratin, type II cytoskeletal 2 epidermal 40
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proteore
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155 P13645 Keratin, type I cytoskeletal 10 40
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proteore
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156 Q5D862 Filaggrin-2 14
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proteore
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157 Q5T749 Keratinocyte proline-rich protein 13
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proteore
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158 Q8IW75 Serpin A12 3
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proteore
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159 P81605 Dermcidin 3
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proteore
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160 P22531 Small proline-rich protein 2E 3
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proteore
parents:
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161 P59666 Neutrophil defensin 3 2
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proteore
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162 P78386 Keratin, type II cuticular Hb5 2
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proteore
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163
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proteore
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164
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165