Mercurial > repos > proteore > proteore_clusterprofiler

comparison test-data/cluster_profiler_GGO_MF.csv @ 7:4609346d8108 draft

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planemo upload commit 9af2cf12c26c94e7206751ccf101a3368f92d0ba
author proteore
date Tue, 18 Dec 2018 09:21:32 -0500
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children f6107b8ae8f8
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6:5e16cec55146 7:4609346d8108
1 ID Description Count GeneRatio geneID
2 GO:0004133 glycogen debranching enzyme activity 0 0/153
3 GO:0016491 oxidoreductase activity 11 11/153 CAT/PRDX1/GAPDH/LDHA/TXN/SOD1/ALOX12B/GSTP1/PGK1/HBB/MDH2
4 GO:0008987 quinolinate synthetase A activity 0 0/153
5 GO:0009975 cyclase activity 0 0/153
6 GO:0010280 UDP-L-rhamnose synthase activity 0 0/153
7 GO:0016740 transferase activity 10 10/153 TGM3/PKM/GAPDH/HSP90AA1/GGCT/GSTP1/PGK1/EEF1G/PNP/TYMP
8 GO:0016787 hydrolase activity 37 37/153 LTF/CASP14/AZGP1/ANXA1/HSPA5/CAT/ARG1/HSPA1A/HSPA1B/EEF2/MYH9/TUBB4B/LYZ/TUBA1B/HSP90AA1/CTSD/CPA4/BLMH/PLBD1/HSPA8/EIF4A1/GGH/CTSV/CAPN1/IDE/AGA/PSMA3/KLK1/CTSB/RPS3/ATP5A1/PSMB3/AMY1A/AMY1B/AMY1C/PIP/DCD
9 GO:0016829 lyase activity 5 5/153 ENO1/ALDOA/ALDOC/RPS3/HAL
10 GO:0016853 isomerase activity 3 3/153 TPI1/PPIA/PPIB
11 GO:0016874 ligase activity 1 1/153 GSS
12 GO:0032451 demethylase activity 0 0/153
13 GO:0046572 versicolorin B synthase activity 0 0/153
14 GO:0046905 phytoene synthase activity 0 0/153
15 GO:0061783 peptidoglycan muralytic activity 1 1/153 LYZ
16 GO:0070283 radical SAM enzyme activity 0 0/153
17 GO:0140096 catalytic activity, acting on a protein 22 22/153 LTF/CASP14/TGM3/GAPDH/HSP90AA1/GGCT/CTSD/CPA4/BLMH/PPIA/GGH/CTSV/CAPN1/IDE/AGA/PSMA3/KLK1/CTSB/PPIB/PSMB3/PIP/DCD
18 GO:0140097 catalytic activity, acting on DNA 2 2/153 ANXA1/RPS3
19 GO:0140098 catalytic activity, acting on RNA 2 2/153 AZGP1/EIF4A1
20 GO:1990055 phenylacetaldehyde synthase activity 0 0/153
21 GO:0000156 phosphorelay response regulator activity 0 0/153
22 GO:0004879 nuclear receptor activity 0 0/153
23 GO:0004708 MAP kinase kinase activity 0 0/153
24 GO:0005057 signal transducer activity, downstream of receptor 0 0/153
25 GO:0005068 transmembrane receptor protein tyrosine kinase adaptor activity 0 0/153
26 GO:0030297 transmembrane receptor protein tyrosine kinase activator activity 0 0/153
27 GO:0008086 light-activated voltage-gated calcium channel activity 0 0/153
28 GO:0008384 IkappaB kinase activity 0 0/153
29 GO:0009927 histidine phosphotransfer kinase activity 0 0/153
30 GO:0038023 signaling receptor activity 3 3/153 KRT17/PIGR/DMBT1
31 GO:0038078 MAP kinase phosphatase activity involved in regulation of innate immune response 0 0/153
32 GO:0097199 cysteine-type endopeptidase activity involved in apoptotic signaling pathway 0 0/153
33 GO:0099107 ion channel regulator activity involved in G-protein coupled receptor signaling pathway 0 0/153
34 GO:1990890 netrin receptor binding 0 0/153
35 GO:0003735 structural constituent of ribosome 3 3/153 UBA52/RPSA/RPS3
36 GO:0005199 structural constituent of cell wall 1 1/153 JUP
37 GO:0005200 structural constituent of cytoskeleton 11 11/153 DSP/KRT16/ACTG1/KRT17/KRT6B/TUBB4B/TUBA1B/KRT15/ARPC4/ACTR2/KRT2
38 GO:0005201 extracellular matrix structural constituent 0 0/153
39 GO:0005212 structural constituent of eye lens 0 0/153
40 GO:0005213 structural constituent of chorion 0 0/153
41 GO:0008147 structural constituent of bone 0 0/153
42 GO:0008307 structural constituent of muscle 1 1/153 PLEC
43 GO:0016490 structural constituent of peritrophic membrane 0 0/153
44 GO:0017056 structural constituent of nuclear pore 0 0/153
45 GO:0019911 structural constituent of myelin sheath 0 0/153
46 GO:0030280 structural constituent of epidermis 5 5/153 FLG/KRT1/KRT2/KRT10/SPRR2E
47 GO:0030527 structural constituent of chromatin 0 0/153
48 GO:0032947 protein complex scaffold activity 0 0/153
49 GO:0035804 structural constituent of egg coat 0 0/153
50 GO:0039660 structural constituent of virion 0 0/153
51 GO:0042302 structural constituent of cuticle 0 0/153
52 GO:0043886 structural constituent of carboxysome 0 0/153
53 GO:0097099 structural constituent of albumen 0 0/153
54 GO:0097493 structural molecule activity conferring elasticity 0 0/153
55 GO:0098918 structural constituent of synapse 0 0/153
56 GO:0005344 oxygen carrier activity 1 1/153 HBB
57 GO:0022857 transmembrane transporter activity 3 3/153 AZGP1/TF/ATP5A1
58 GO:0005326 neurotransmitter transporter activity 0 0/153
59 GO:0005487 nucleocytoplasmic transporter activity 0 0/153
60 GO:0051183 vitamin transporter activity 0 0/153
61 GO:0051184 cofactor transporter activity 0 0/153
62 GO:0017089 glycolipid transporter activity 0 0/153
63 GO:0022892 substrate-specific transporter activity 5 5/153 AZGP1/TF/APOD/ATP5A1/NPC2
64 GO:0034202 glycolipid-translocating activity 0 0/153
65 GO:0034437 glycoprotein transporter activity 0 0/153
66 GO:0038024 cargo receptor activity 1 1/153 DMBT1
67 GO:0043563 odorant transporter activity 0 0/153
68 GO:0090484 drug transporter activity 0 0/153
69 GO:0098748 endocytic adaptor activity 0 0/153
70 GO:1990833 clathrin-uncoating ATPase activity 0 0/153
71 GO:0000035 acyl binding 0 0/153
72 GO:0005515 protein binding 126 126/153 DSP/KRT6A/ALB/KRT16/DSG1/ANXA2/JUP/LTF/MUC5B/SERPINB3/ACTG1/KRT17/FABP5/CASP14/ENO1/AZGP1/PLEC/KRT80/KRT13/KRT6B/LMNA/ANXA1/HSPA5/TF/CAT/S100A7/SFN/SERPINB12/PKM/TPI1/PRDX1/CSTA/GAPDH/HSPA1A/HSPA1B/EEF2/MYH9/TUBB4B/POF1B/LYZ/TUBA1B/SERPINA1/HSP90AA1/IL36G/ACTN4/GGCT/LDHA/CTSD/UBA52/TXN/DMBT1/BLMH/FLNB/SOD1/HSPB1/HSPA8/EPPK1/EIF4A1/PPIA/YWHAZ/ALOX12B/GSTP1/LCN1/SERPINB4/CTSV/PGK1/ALDOA/CAPN1/VCL/YWHAE/HBB/HP/SERPINA3/ORM1/IL1RN/SPRR1B/LCN2/CST6/S100A14/GSN/IDE/AGA/PSMA3/EEF1G/SERPINB5/MDH2/FCGBP/LYPD3/CSTB/ALDOC/KRT15/FLG/SERPINB13/APOD/CTSB/RPSA/LAMP1/LAMP2/TYMP/PPIB/RPS3/ATP5A1/CALML3/S100A11/CAPG/CAPZB/GSS/PSMB3/GDI2/ARPC4/ACTR2/NPC2/AMY1A/AMY1B/AMY1C/PIP/CST4/MUC7/CST1/CST2/KRT1/KRT2/KPRP/DCD/SPRR2E/DEFA3
73 GO:0001871 pattern binding 0 0/153
74 GO:0003682 chromatin binding 1 1/153 ACTN4
75 GO:0003823 antigen binding 0 0/153
76 GO:0030246 carbohydrate binding 4 4/153 LGALS7B/ALDOA/ZG16B/KRT1
77 GO:0005549 odorant binding 0 0/153
78 GO:0008289 lipid binding 8 8/153 ALB/ANXA2/LTF/FABP5/ANXA1/HSPA8/APOD/NPC2
79 GO:0008144 drug binding 4 4/153 ALB/PPIA/GSTP1/PNP
80 GO:0008430 selenium binding 0 0/153
81 GO:0019825 oxygen binding 2 2/153 ALB/HBB
82 GO:0015643 toxic substance binding 2 2/153 ALB/DSG1
83 GO:0019808 polyamine binding 0 0/153
84 GO:0050840 extracellular matrix binding 2 2/153 ANXA2/LYPD3
85 GO:0031409 pigment binding 0 0/153
86 GO:0033218 amide binding 5 5/153 PPIA/GSTP1/CTSV/IDE/GSS
87 GO:0033226 2-aminoethylphosphonate binding 0 0/153
88 GO:0035731 dinitrosyl-iron complex binding 1 1/153 GSTP1
89 GO:0036094 small molecule binding 28 28/153 ALB/ACTG1/FABP5/HSPA5/CAT/PKM/GAPDH/HSPA1A/HSPA1B/EEF2/MYH9/TUBB4B/TUBA1B/HSP90AA1/ACTN4/LDHA/HSPA8/EIF4A1/PGK1/ALDOA/LCN2/IDE/PNP/APOD/ATP5A1/GSS/ACTR2/NPC2
90 GO:0042165 neurotransmitter binding 1 1/153 IDE
91 GO:0042562 hormone binding 2 2/153 PKM/IDE
92 GO:0043167 ion binding 51 51/153 ALB/DSG1/ANXA2/LTF/ACTG1/FABP5/ENO1/TGM3/HRNR/ANXA1/HSPA5/TF/CAT/S100A7/PKM/ARG1/HSPA1A/HSPA1B/EEF2/MYH9/TUBB4B/TUBA1B/HSP90AA1/ACTN4/CPA4/SOD1/HSPA8/EIF4A1/ALOX12B/GSTP1/LCN1/DSC3/PGK1/CAPN1/HBB/LCN2/S100A14/GSN/IDE/PNP/FLG/ATP5A1/CALML3/S100A11/GSS/ACTR2/AMY1A/AMY1B/AMY1C/CALML5/FLG2
93 GO:0043176 amine binding 0 0/153
94 GO:0043210 alkanesulfonate binding 0 0/153
95 GO:0043287 poly(3-hydroxyalkanoate) binding 0 0/153
96 GO:0046812 host cell surface binding 0 0/153
97 GO:0044877 macromolecular complex binding 21 21/153 HSPA5/PKM/EEF2/MYH9/POF1B/HSP90AA1/ACTN4/HSPA8/EPPK1/CTSV/YWHAE/GSN/CTSB/RPSA/PPIB/RPS3/CAPG/CAPZB/ARPC4/ACTR2/PIP
98 GO:0046790 virion binding 1 1/153 PPIA
99 GO:0046848 hydroxyapatite binding 0 0/153
100 GO:0046904 calcium oxalate binding 0 0/153
101 GO:0048037 cofactor binding 4 4/153 ALB/CAT/GAPDH/LDHA
102 GO:0050436 microfibril binding 0 0/153
103 GO:0050824 water binding 0 0/153
104 GO:0050997 quaternary ammonium group binding 0 0/153
105 GO:0051540 metal cluster binding 1 1/153 RPS3
106 GO:0060090 molecular adaptor activity 5 5/153 DSP/ANXA1/CSTA/SPRR1B/ARPC4
107 GO:0070026 nitric oxide binding 1 1/153 GSTP1
108 GO:0072328 alkene binding 0 0/153
109 GO:0072341 modified amino acid binding 3 3/153 HSPA8/GSTP1/GSS
110 GO:0097159 organic cyclic compound binding 50 50/153 DSP/ALB/ANXA2/LTF/ACTG1/ENO1/PLEC/ANXA1/HSPA5/CAT/PKM/PRDX1/GAPDH/HSPA1A/HSPA1B/EEF2/MYH9/TUBB4B/TUBA1B/HSP90AA1/ACTN4/LDHA/TXN/FLNB/HSPB1/HSPA8/EPPK1/EIF4A1/PPIA/YWHAZ/PGK1/ALDOA/YWHAE/HBB/SERPINA3/IDE/EEF1G/MDH2/PNP/CSTB/APOD/RPSA/PPIB/RPS3/ATP5A1/GSS/GDI2/ACTR2/NPC2/DCD
111 GO:0097243 flavonoid binding 0 0/153
112 GO:0097367 carbohydrate derivative binding 21 21/153 LTF/ACTG1/HSPA5/PKM/HSPA1A/HSPA1B/EEF2/MYH9/TUBB4B/TUBA1B/HSP90AA1/ACTN4/HSPA8/EIF4A1/PGK1/IDE/PNP/CTSB/ATP5A1/GSS/ACTR2
113 GO:1901363 heterocyclic compound binding 48 48/153 DSP/ALB/ANXA2/LTF/ACTG1/ENO1/PLEC/ANXA1/HSPA5/CAT/PKM/PRDX1/GAPDH/HSPA1A/HSPA1B/EEF2/MYH9/TUBB4B/TUBA1B/HSP90AA1/ACTN4/LDHA/TXN/FLNB/HSPB1/HSPA8/EPPK1/EIF4A1/PPIA/YWHAZ/PGK1/ALDOA/YWHAE/HBB/SERPINA3/IDE/EEF1G/MDH2/PNP/CSTB/RPSA/PPIB/RPS3/ATP5A1/GSS/GDI2/ACTR2/DCD
114 GO:1901567 fatty acid derivative binding 0 0/153
115 GO:1901681 sulfur compound binding 3 3/153 LTF/GSTP1/GSS
116 GO:1902670 carbon dioxide binding 0 0/153
117 GO:1904012 platinum binding 0 0/153
118 GO:1904013 xenon atom binding 0 0/153
119 GO:1904483 synthetic cannabinoid binding 0 0/153
120 GO:1904493 tetrahydrofolyl-poly(glutamate) polymer binding 0 0/153
121 GO:1904517 MgATP(2-) binding 0 0/153
122 GO:0004362 glutathione-disulfide reductase activity 0 0/153
123 GO:0004601 peroxidase activity 4 4/153 CAT/PRDX1/GSTP1/HBB
124 GO:0004784 superoxide dismutase activity 1 1/153 SOD1
125 GO:0004791 thioredoxin-disulfide reductase activity 1 1/153 TXN
126 GO:0032542 sulfiredoxin activity 0 0/153
127 GO:0045174 glutathione dehydrogenase (ascorbate) activity 0 0/153
128 GO:0050605 superoxide reductase activity 0 0/153
129 GO:0051920 peroxiredoxin activity 1 1/153 PRDX1
130 GO:0004694 eukaryotic translation initiation factor 2alpha kinase activity 0 0/153
131 GO:0030371 translation repressor activity 0 0/153
132 GO:0044748 3'-5'-exoribonuclease activity involved in mature miRNA 3'-end processing 0 0/153
133 GO:0045183 translation factor activity, non-nucleic acid binding 0 0/153
134 GO:0090079 translation regulator activity, nucleic acid binding 0 0/153
135 GO:0090624 endoribonuclease activity, cleaving miRNA-paired mRNA 0 0/153
136 GO:0004679 AMP-activated protein kinase activity 0 0/153
137 GO:0004690 cyclic nucleotide-dependent protein kinase activity 0 0/153
138 GO:0004872 receptor activity 5 5/153 KRT17/PIGR/DMBT1/RPSA/KRT1
139 GO:0017132 cAMP-dependent guanyl-nucleotide exchange factor activity 0 0/153
140 GO:0031992 energy transducer activity 0 0/153
141 GO:0097472 cyclin-dependent protein kinase activity 0 0/153
142 GO:0005085 guanyl-nucleotide exchange factor activity 1 1/153 YWHAE
143 GO:0016247 channel regulator activity 1 1/153 YWHAE
144 GO:0030234 enzyme regulator activity 27 27/153 ANXA2/LTF/SERPINB3/ANXA1/SFN/SERPINB12/CSTA/GAPDH/SERPINB7/SERPINA1/HSP90AA1/HSPB1/GSTP1/LCN1/SERPINB4/A2ML1/SERPINA3/SERPINB1/CST6/SERPINB5/CSTB/SERPINB13/GDI2/CST4/CST1/CST2/SERPINA12
145 GO:0030545 receptor regulator activity 3 3/153 IL36G/IL1RN/TYMP
146 GO:0001618 virus receptor activity 6 6/153 SERPINB3/HSPA1A/HSPA1B/IDE/RPSA/LAMP1
147 GO:0000036 acyl carrier activity 0 0/153
148 GO:0016530 metallochaperone activity 0 0/153
149 GO:0036370 D-alanyl carrier activity 0 0/153
150 GO:1904091 peptidyl carrier protein activity involved in nonribosomal peptide biosynthesis 0 0/153
151 GO:0000988 transcription factor activity, protein binding 3 3/153 JUP/HSPA1A/ACTN4
152 GO:0001070 RNA binding transcription regulator activity 0 0/153
153 GO:0001072 transcription antitermination factor activity, RNA binding 0 0/153
154 GO:0001073 transcription antitermination factor activity, DNA binding 0 0/153
155 GO:0003700 DNA binding transcription factor activity 1 1/153 ENO1