Mercurial > repos > proteore > proteore_clusterprofiler

diff GO-enrich.R @ 9:2f67202ffdb3 draft

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planemo upload commit 6ca074d75447a272b570f7709ed10d0c8356bec5-dirty
author proteore
date Wed, 27 Feb 2019 03:39:16 -0500
parents b29255864039
children d951677a50d4
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--- a/GO-enrich.R	Fri Dec 21 04:12:32 2018 -0500
+++ b/GO-enrich.R	Wed Feb 27 03:39:16 2019 -0500
@@ -156,9 +156,12 @@
   #save(args,file="/home/dchristiany/proteore_project/ProteoRE/tools/cluster_profiler/args.Rda")
   #load("/home/dchristiany/proteore_project/ProteoRE/tools/cluster_profiler/args.Rda")
   
-  plot = unlist(strsplit(args$plot,","))
+  
   go_represent=str2bool(args$go_represent)
   go_enrich=str2bool(args$go_enrich)
+  if (go_enrich){
+    plot = unlist(strsplit(args$plot,","))
+  }
   
   suppressMessages(library(args$species, character.only = TRUE, quietly = TRUE))