Mercurial > repos > proteore > proteore_data_manager

comparison data_manager_conf.xml @ 5:b05fa99ddda2 draft

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"planemo upload commit a23ff40d482d58e0425108bf60372e5fcafb847e"
author proteore
date Thu, 06 Feb 2020 04:02:50 -0500
parents e967a99d66b3
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4:e967a99d66b3 5:b05fa99ddda2
15 <value_translation type="function">abspath</value_translation> 15 <value_translation type="function">abspath</value_translation>
16 </column> 16 </column>
17 </output> 17 </output>
18 </data_table> 18 </data_table>
19 <data_table name="proteore_protein_atlas_normal_tissue"> 19 <data_table name="proteore_protein_atlas_normal_tissue">
20 <output>
21 <column name="id"/>
22 <column name="release"/>
23 <column name="name" />
24 <column name="tissue" />
25 <column name="value" output_ref="output" >
26 <move type="file">
27 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">protein_atlas/</target>
28 </move>
29 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/protein_atlas/${release}.tsv</value_translation>
30 <value_translation type="function">abspath</value_translation>
31 </column>
32 </output>
33 </data_table>
34 <data_table name="proteore_protein_atlas_rna_tissue">
20 <output> 35 <output>
21 <column name="id"/> 36 <column name="id"/>
22 <column name="release"/> 37 <column name="release"/>
23 <column name="name" /> 38 <column name="name" />
24 <column name="tissue" /> 39 <column name="tissue" />