comparison README.rst @ 2:6c84a41c44d8 draft

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date Wed, 07 Mar 2018 09:32:11 -0500
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1 Wrapper for Reactome web service 1 Wrapper for Reactome Tool
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4 Reactome web service (https://reactome.org) 4 Reactome web service (https://reactome.org)
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6 **Galaxy integration** 6 **Galaxy integration**
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10 Sandra Dérozier, Olivier Rué, Christophe Caron, Valentin Loux INRA, Paris-Saclay University, MAIAGE Unit,Migale Bioinformatics platform 10 Sandra Dérozier, Olivier Rué, Christophe Caron, Valentin Loux INRA, Paris-Saclay University, MAIAGE Unit,Migale Bioinformatics platform
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12 Contact support@proteore.org for any questions or concerns about the Galaxy implementation of this tool. 12 Contact support@proteore.org for any questions or concerns about the Galaxy implementation of this tool.
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16 Reactome software provides service of creating diagram representing the relations between the biological processes. This tool allows linking to Reactome web service with pre-loaded data from a list of IDs, a file containing IDs or from a column of a complexed file. 16 Reactome software provides service of creating diagram representing the relations between the biological processes.
17 This tool allows linking to Reactome web service with pre-loaded data from a list of IDs, a file containing IDs or from a column of a complexed file.
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18 **For the rows that have more than 1 ID, only the first one is taken into account** 19 **For the rows that have more than 1 ID, only the first one is taken into account.**
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20 **This tool only accepts letters (a-z or A-Z), numbers (0-9) and 3 characters "." "-" "_" for IDs. If there is ID containing other than these characters, it will be removed from the queue and placed in "Invalid identifiers" file** 21 **Supported IDs: Uniprot accession number (e.g. P01023), Entrez gene ID (e.g.7157), gene name (e.g. AQP7). If there is any ID containing invalid characters, it will be removed from the queue and placed in "Invalid identifiers" file.**