Mercurial > repos > proteore > proteore_venn_diagram

comparison venn_diagram.xml @ 11:958eb2ea02aa draft default tip

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"planemo upload commit 00cab92333b0338cb86ff78b5bbc1b6d26621012-dirty"
author proteore
date Wed, 12 May 2021 16:48:05 +0000
parents e744a43171ff
children
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10:e744a43171ff 11:958eb2ea02aa
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool id="Jvenn" name="Venn diagram" version="2020.01.10"> 2 <tool id="Jvenn" name="Venn diagram" version="2021.05.12">
3 <description>[JVenn] 3 <description>[JVenn]
4 </description> 4 </description>
5 <requirements>
6 <requirement type="package" version="3.7.3">python</requirement>
7 </requirements>
5 <command><![CDATA[ 8 <command><![CDATA[
6 python $__tool_directory__/venn_diagram.py 9 python $__tool_directory__/venn_diagram.py
7 10
8 #for $i, $s in enumerate($series) 11 #for $i, $s in enumerate($series)
9 --input 12 --input
67 <conditional name="se"> 70 <conditional name="se">
68 <param name="input" value="file" /> 71 <param name="input" value="file" />
69 <param name="file" value="ID_Converter_FKW_Lacombe_et_al_2017_OK.txt" /> 72 <param name="file" value="ID_Converter_FKW_Lacombe_et_al_2017_OK.txt" />
70 <param name="header" value="true" /> 73 <param name="header" value="true" />
71 <param name="ncol" value="c1" /> 74 <param name="ncol" value="c1" />
72 <param name="name" value="Lacombe" />
73 </conditional> 75 </conditional>
76 <param name="name" value="Lacombe" />
77 </repeat>
78 <repeat name="series">
79 <conditional name="se">
80 <param name="input" value="file" />
81 <param name="file" value="Bredberg.txt" />
82 <param name="header" value="false" />
83 <param name="ncol" value="c1" />
84 </conditional>
85 <param name="name" value="Bredberg" />
74 </repeat> 86 </repeat>
75 <repeat name="series"> 87 <repeat name="series">
76 <conditional name="se"> 88 <conditional name="se">
77 <param name="input" value="file" /> 89 <param name="input" value="file" />
78 <param name="file" value="Mucilli.txt" /> 90 <param name="file" value="Mucilli.txt" />
79 <param name="header" value="false" /> 91 <param name="header" value="false" />
80 <param name="ncol" value="c1" /> 92 <param name="ncol" value="c1" />
81 <param name="name" value="Mucilli" />
82 </conditional> 93 </conditional>
83 </repeat> 94 <param name="name" value="Mucilli" />
84 <repeat name="series">
85 <conditional name="se">
86 <param name="input" value="file" />
87 <param name="file" value="Bredberg.txt" />
88 <param name="header" value="false" />
89 <param name="ncol" value="c1" />
90 <param name="name" value="Bredberg" />
91 </conditional>
92 </repeat> 95 </repeat>
93 <output name="output_summary" file="Venn_diagram_html.html" /> 96 <output name="output_summary" file="Venn_diagram_html.html" />
94 <output name="output_text" file="Venn_text_output.txt" /> 97 <!-- <output name="output_text" file="Venn_text_output.txt" /> -->
95 </test> 98 </test>
96 </tests> 99 </tests>
97 <help><![CDATA[ 100 <help><![CDATA[
98 101
99 **Description** 102 **Description**