Mercurial > repos > public-health-bioinformatics > antigenic_site_extraction

diff test-data/output.fasta @ 0:a1b46e339580 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/Public-Health-Bioinformatics/flu_classification_suite commit b96b6e06f6eaa6ae8ef4c24630dbb72a4aed7dbe
author public-health-bioinformatics
date Thu, 04 Jul 2019 19:36:38 -0400
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/output.fasta	Thu Jul 04 19:36:38 2019 -0400
@@ -0,0 +1,56 @@
+>Seq1(3C.2a.3)
+QNSSIEIDSQLENIQGQNKKLFVSKYNVPRTNNSNTGVKQNTSAIKSSSSRNTHLNYTAL
+NTMNNEQFDKLIVGTDKDIFLAQSRTKRSAVIPNIGSIPSRIKGILNSTIQSSPGKKSEF
+VRIACRYVKHS
+>Seq2(3C.2a.4)
+QNSSIEIDSQLENIQGQNKKLFVSKYNVPRTKDSNTGVTQNTSAIRSKSSRNTHLNYTAL
+NTMNNEQFDKLIVGTDKDIFLAQSRTKRSAVIPNIGSIPSRIKGILNSTIRNSPGKKSEF
+VRIACRYVKHS
+>Seq3(3C.2a.3)
+QNSSIEINSQLENIQGQNKKLFVSKYNVPRTNNSNTGVKQNTSAIKSSSSRNTHLNYTAL
+NTMNNEQFDKLIVGTDKDISLAQSRTKRSAVIPNIGSIPSRIKGILNSTIQSSPGKKSEF
+VRIACRYVKHS
+>Seq4(3C.2a.2)
+QNSSIEIDSQLENIQGQNKKLFVSKYNVPRTNNSNTGVTQNTSAMRSSSSRNTHLNYTAL
+NTMNNEQFDKLIVGTDKDIFLAKSRTKRSAVIPNIGSIPSRIKGILNSTIQSSPGKKSEF
+VRIACRYVKHS
+>Seq5(3C.2a.3)
+QNSSIEIDSQLENIQGQNKKLFVSKYNVPRTNNSNTGVKQNTSAIKSSSSRNTHLNYTAL
+NTMNNEQFDKLIVGTDKDISLAQSRTKRSAVIPNIGSIPSRIKGILNSTIQSSPGKKSEF
+VRIACRYVKHS
+>Seq5(3C.2a.4)
+QNSSIEIDSQLENIQGQNKKLFVSKYNVPRTKNSNTGVTQNTSAIRSKSSRNTHLNYTAL
+NTMNNEQFDKLIVGTDKDIFLAQSRTKRSAVIPNIGYIPSRIKGILNSTIRSSPGKKSEF
+VRIACRYVKHS
+>Seq6(3C.3a)
+QNSSIEIDSQLENIQGQNKKLFVNKYSVPRTNNSNAGVTQNTSSIGSKSSRNTHLNSKAL
+NTMNNEQFDKLIVGTDKDISLAQSRTKRSAVIPNIGSIPSRIKGILNSTIRSSPGKKSEF
+VRIACRYVKQS
+>Seq7(3C.3a)
+QNSSIEIDSQLENIQGQNKKLFVNKYNVPRTNNSNAGVTQNTSSIGSKSSRNTHLNSKAL
+NTMNNEQFDKLIVGTDKDISLAQSRTKRSAVIPNIGSIPSRIKGILNSTIRSSPGKKSEF
+VRIACRYVKQS
+>Seq8(3C.2a.1)
+QNSSIEIDSQLENIQGQNKKLFVSKYNVPRTKNSNTGVTQNKSAIRSSSSRNTHLNYTAL
+NTMNKEQFDKLIVGTDKDIFLAQPRTKRSAVIPNIGSIPSRIKGILNSTIRSSPGKKSEF
+VRIACRYVKHS
+>Clade_3C.2a_A/Hong_Kong/5738/2014
+QNSSIEIDSQLENIQGQNKKLFVSKYNVPRTNNSNTGVTQNTSAIRSSSSRNTHLNYTAL
+NTMNNEQFDKLIVGTDKDIFLAQSRTKRSAVIPNIGSIPSRIKGILNSTIRSSPGKKSEF
+VRIACRYVKH?
+>Clade_3C.3a_A/Switzerland/9715293/2013
+QNSSIEIDSQLENIQGQNKKLFVSKYNVPRTNNSNAGVTQNTSSIGSNSSRNTHLNSKAL
+NTMNNEQFDKLIVGTDKDIFLAQSRTKRSAVIPNIGSIPSRIKGILNSTIRSSPGKKSEF
+VRIACRYVKQS
+>Seq9(3C.2a.1)
+QNSSIEIDSQLENIQGQNKKLFVSKYNVPRTNNSNTGVTQNTSAIRSSSSRNTHLNYTAL
+NTMNKEQFDKLIVGTDKDIFLAQSRTKRSAVIPNIGSIPSRIKGILNSTIRSSPGKKSEF
+VRIACRYVKHS
+>Seq10(3C.2a.1)
+QNSSIEIDSQLENIQGQNKKLFVSKYNVPRTKNSNTGVTQNKSAIRSSSSRNTHLNYTAL
+NTMNKEQFDKLIVGTDKDIFLAQSRTKRSAVIPNIGSIPSRIKGILNSTIRSSPGKKSEF
+VRIACRYVKHS
+>Clade_3C.2a.1_A/Bolzano/7/2016
+QNSSIEIDSQLENIQGQNKKLFVSKYNVPRTNNSNTGVTQNTSAIRSSSSRNTHLNYTAL
+NTMNKEQFDKLIVGTDKDIFLAQSRTKRSAVIPNIGSIPSRIKGILNSTIRSSPGKKSEF
+VRIACRYVKHS