Mercurial > repos > public-health-bioinformatics > fastp_json_to_tabular
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
| author | public-health-bioinformatics |
|---|---|
| date | Thu, 10 Mar 2022 21:59:56 +0000 |
| parents | |
| children |
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{ "summary": { "fastp_version": "0.23.2", "sequencing": "paired end (301 cycles + 301 cycles)", "before_filtering": { "total_reads":2489208, "total_bases":538461532, "q20_bases":486388202, "q30_bases":439107721, "q20_rate":0.903292, "q30_rate":0.815486, "read1_mean_length":212, "read2_mean_length":220, "gc_content":0.512001 }, "after_filtering": { "total_reads":2489208, "total_bases":538461532, "q20_bases":486388202, "q30_bases":439107721, "q20_rate":0.903292, "q30_rate":0.815486, "read1_mean_length":212, "read2_mean_length":220, "gc_content":0.512001 } }, "filtering_result": { "passed_filter_reads": 2489208, "low_quality_reads": 0, "too_many_N_reads": 0, "too_short_reads": 0, "too_long_reads": 0 }, "duplication": { "rate": 0.00105174 }, "insert_size": { "peak": 175, "unknown": 239303, "histogram": 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"ACGCT":258153, "ACGCC":354569, "ACGCG":235584, "ACGGA":150385, "ACGGT":240166, "ACGGC":332062, "ACGGG":164071, "AGAAA":399397, "AGAAT":230099, "AGAAC":255931, "AGAAG":287839, "AGATA":229868, "AGATT":231199, "AGATC":262142, "AGATG":252477, "AGACA":153796, "AGACT":109067, "AGACC":181511, "AGACG":161940, "AGAGA":172779, "AGAGT":128279, "AGAGC":213634, "AGAGG":136930, "AGTAA":193021, "AGTAT":169468, "AGTAC":178550, "AGTAG":113395, "AGTTA":174045, "AGTTT":250253, "AGTTC":248872, "AGTTG":223051, "AGTCA":186142, "AGTCT":107131, "AGTCC":113031, "AGTCG":161453, "AGTGA":185118, "AGTGT":124402, "AGTGC":180646, "AGTGG":177911, "AGCAA":326340, "AGCAT":271993, "AGCAC":313560, "AGCAG":469471, "AGCTA":132454, "AGCTT":242765, "AGCTC":202650, "AGCTG":381806, "AGCCA":300750, "AGCCT":208409, "AGCCC":225794, "AGCCG":304350, "AGCGA":268924, "AGCGT":257540, "AGCGC":466307, "AGCGG":328236, "AGGAA":246141, "AGGAT":220887, "AGGAC":134558, "AGGAG":147384, "AGGTA":176811, "AGGTT":225261, "AGGTC":207340, 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"CCCCT":134441, "CCCCC":119161, "CCCCG":182232, "CCCGA":173273, "CCCGT":162712, "CCCGC":311837, "CCCGG":262869, "CCGAA":243436, "CCGAT":264165, "CCGAC":255471, "CCGAG":209363, "CCGTA":156316, "CCGTT":247305, "CCGTC":249293, "CCGTG":249252, "CCGCA":307700, "CCGCT":324807, "CCGCC":497014, "CCGCG":364525, "CCGGA":229292, "CCGGT":287518, "CCGGC":483773, "CCGGG":263694, "CGAAA":280648, "CGAAT":192544, "CGAAC":267698, "CGAAG":322303, "CGATA":255620, "CGATT":227988, "CGATC":321959, "CGATG":399096, "CGACA":266041, "CGACT":162975, "CGACC":290367, "CGACG":298767, "CGAGA":173624, "CGAGT":132642, "CGAGC":286420, "CGAGG":228705, "CGTAA":184250, "CGTAT":183057, "CGTAC":145019, "CGTAG":145271, "CGTTA":197795, "CGTTT":277592, "CGTTC":248508, "CGTTG":302087, "CGTCA":284516, "CGTCT":203926, "CGTCC":168263, "CGTCG":295924, "CGTGA":229763, "CGTGT":133959, "CGTGC":267899, "CGTGG":272635, "CGCAA":277053, "CGCAT":265778, "CGCAC":255927, "CGCAG":409600, "CGCTA":161797, "CGCTT":296152, "CGCTC":247605, "CGCTG":605396, "CGCCA":556853, "CGCCT":357619, "CGCCC":363010, "CGCCG":612593, "CGCGA":297660, "CGCGT":233212, "CGCGC":514861, "CGCGG":364259, "CGGAA":249703, "CGGAT":228534, "CGGAC":143590, "CGGAG":145392, "CGGTA":235729, "CGGTT":250943, "CGGTC":239747, "CGGTG":404096, "CGGCA":473444, "CGGCT":301794, "CGGCC":434177, "CGGCG":614154, "CGGGA":164594, "CGGGT":233444, "CGGGC":328428, "CGGGG":183030, "GAAAA":486944, "GAAAT":372928, "GAAAC":285102, "GAAAG":289470, "GAATA":258910, "GAATT":247539, "GAATC":198912, "GAATG":229150, "GAACA":335035, "GAACT":274864, "GAACC":213654, "GAACG":253241, "GAAGA":398170, "GAAGT":263506, "GAAGC":333986, "GAAGG":271276, "GATAA":329158, "GATAT":294109, "GATAC":198658, "GATAG":177844, "GATTA":221904, "GATTT":361733, "GATTC":196852, "GATTG":254011, "GATCA":346234, "GATCT":242510, "GATCC":229567, "GATCG":346855, "GATGA":405626, "GATGT":278543, "GATGC":369514, "GATGG":348702, "GACAA":228737, "GACAT":199431, "GACAC":149899, "GACAG":204383, "GACTA":102696, "GACTT":171866, "GACTC":106616, "GACTG":167099, "GACCA":282433, "GACCT":207308, "GACCC":156838, "GACCG":241548, "GACGA":255075, "GACGT":166685, "GACGC":267194, "GACGG":227418, "GAGAA":234415, "GAGAT":208948, "GAGAC":107682, "GAGAG":123162, "GAGTA":129220, "GAGTT":190554, "GAGTC":104875, "GAGTG":125497, "GAGCA":316706, "GAGCT":203329, "GAGCC":179540, "GAGCG":252881, "GAGGA":171558, "GAGGT":163937, "GAGGC":195537, "GAGGG":126241, "GTAAA":277674, "GTAAT":228629, "GTAAC":172598, "GTAAG":136959, "GTATA":132919, "GTATT":249581, "GTATC":196497, "GTATG":181130, "GTACA":175587, "GTACT":177732, "GTACC":166989, "GTACG":144033, "GTAGA":148408, "GTAGT":145747, "GTAGC":170116, "GTAGG":112287, "GTTAA":247464, "GTTAT":242506, "GTTAC":169794, "GTTAG":115772, "GTTTA":237697, "GTTTT":393090, "GTTTC":274300, "GTTTG":256847, "GTTCA":320687, "GTTCT":244598, "GTTCC":206118, "GTTCG":263970, "GTTGA":323599, "GTTGT":247429, "GTTGC":314619, "GTTGG":244048, "GTCAA":223768, "GTCAT":244337, "GTCAC":223485, 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"ATGCG":250277, "ATGGA":230159, "ATGGT":273058, "ATGGC":354919, "ATGGG":180996, "ACAAA":384756, "ACAAT":243620, "ACAAC":339836, "ACAAG":223582, "ACATA":193345, "ACATT":230106, "ACATC":303581, "ACATG":189560, "ACACA":249760, "ACACT":157943, "ACACC":329641, "ACACG":171119, "ACAGA":235446, "ACAGT":177054, "ACAGC":350543, "ACAGG":252600, "ACTAA":160440, "ACTAT":165927, "ACTAC":170997, "ACTAG":56210, "ACTTA":149850, "ACTTT":250412, "ACTTC":266972, "ACTTG":162698, "ACTCA":185257, "ACTCT":135274, "ACTCC":147305, "ACTCG":141332, "ACTGA":233401, "ACTGT":167529, "ACTGC":252833, "ACTGG":282750, "ACCAA":310216, "ACCAT":297971, "ACCAC":363760, "ACCAG":407217, "ACCTA":117409, "ACCTT":257533, "ACCTC":184318, "ACCTG":354571, "ACCCA":259917, "ACCCT":196173, "ACCCC":277509, "ACCCG":277357, "ACCGA":263049, "ACCGT":247506, "ACCGC":391798, "ACCGG":319028, "ACGAA":259515, "ACGAT":252168, "ACGAC":221501, "ACGAG":167013, "ACGTA":144076, "ACGTT":232390, "ACGTC":179114, "ACGTG":168830, "ACGCA":247305, "ACGCT":254990, "ACGCC":390944, "ACGCG":246492, "ACGGA":187561, "ACGGT":243731, "ACGGC":340677, "ACGGG":179148, "AGAAA":383548, "AGAAT":236327, "AGAAC":293296, "AGAAG":285679, "AGATA":241373, "AGATT":280745, "AGATC":330227, "AGATG":247052, "AGACA":176234, "AGACT":119234, "AGACC":211879, "AGACG":169085, "AGAGA":195667, "AGAGT":189682, "AGAGC":281771, "AGAGG":160125, "AGTAA":201717, "AGTAT":173000, "AGTAC":184546, "AGTAG":123901, "AGTTA":182073, "AGTTT":251587, "AGTTC":243754, "AGTTG":214915, "AGTCA":166890, "AGTCT":109692, "AGTCC":120308, "AGTCG":162058, "AGTGA":188116, "AGTGT":214877, "AGTGC":180779, "AGTGG":180306, "AGCAA":329407, "AGCAT":271558, "AGCAC":305585, "AGCAG":446112, "AGCTA":136995, "AGCTT":242684, "AGCTC":202504, "AGCTG":359373, "AGCCA":305697, "AGCCT":213369, "AGCCC":270947, "AGCCG":315737, "AGCGA":270044, "AGCGT":320048, "AGCGC":465831, "AGCGG":334833, "AGGAA":259696, "AGGAT":212165, "AGGAC":143946, "AGGAG":153622, "AGGTA":178837, "AGGTT":224404, "AGGTC":202654, "AGGTG":258337, "AGGCA":212965, "AGGCT":200066, "AGGCC":320327, "AGGCG":341507, "AGGGA":215181, "AGGGT":192176, "AGGGC":257166, "AGGGG":157517, "TAAAA":484840, "TAAAT":324927, "TAAAC":266870, "TAAAG":291425, "TAATA":278973, "TAATT":262047, "TAATC":227131, "TAATG":256350, "TAACA":250285, "TAACT":187046, "TAACC":214460, "TAACG":208024, "TAAGA":220505, "TAAGT":144320, "TAAGC":170516, "TAAGG":133499, "TATAA":239478, "TATAT":212698, "TATAC":145178, "TATAG":125889, "TATTA":270023, "TATTT":372039, "TATTC":254079, "TATTG":253511, "TATCA":321542, "TATCT":223015, "TATCC":206076, "TATCG":245221, "TATGA":209436, "TATGT":153528, "TATGC":176225, "TATGG":175107, "TACAA":228703, "TACAT":192259, "TACAC":171837, "TACAG":204036, "TACTA":123734, "TACTT":195487, "TACTC":136854, "TACTG":217283, "TACCA":240655, "TACCT":179633, "TACCC":178580, "TACCG":238991, "TACGA":157069, "TACGT":136260, "TACGC":197453, "TACGG":161990, "TAGAA":174204, "TAGAT":181485, "TAGAC":96899, "TAGAG":115304, "TAGTA":118794, 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"CACGT":175257, "CACGC":336853, "CACGG":273992, "CAGAA":354035, "CAGAT":321217, "CAGAC":244795, "CAGAG":202934, "CAGTA":225131, "CAGTT":302309, "CAGTC":173757, "CAGTG":230932, "CAGCA":620769, "CAGCT":364804, "CAGCC":454450, "CAGCG":579383, "CAGGA":306199, "CAGGT":347320, "CAGGC":488122, "CAGGG":321088, "CTAAA":210677, "CTAAT":144599, "CTAAC":138793, "CTAAG":96226, "CTATA":129120, "CTATT":173267, "CTATC":178618, "CTATG":140478, "CTACA":178153, "CTACT":121254, "CTACC":179379, "CTACG":149415, "CTAGA":59501, "CTAGT":49492, "CTAGC":66918, "CTAGG":46830, "CTTAA":179904, "CTTAT":179002, "CTTAC":149152, "CTTAG":94311, "CTTTA":290407, "CTTTT":368180, "CTTTC":291496, "CTTTG":270850, "CTTCA":363760, "CTTCT":279971, "CTTCC":287543, "CTTCG":309293, "CTTGA":260232, "CTTGT":196604, "CTTGC":274607, "CTTGG":197738, "CTCAA":238442, "CTCAT":186059, "CTCAC":174152, "CTCAG":181271, "CTCTA":110349, "CTCTT":212528, "CTCTC":127719, "CTCTG":178798, "CTCCA":221315, "CTCCT":155887, "CTCCC":171839, "CTCCG":161546, "CTCGA":210071, "CTCGT":150247, "CTCGC":246228, "CTCGG":230057, "CTGAA":369023, "CTGAT":373612, "CTGAC":290397, "CTGAG":178658, "CTGTA":198745, "CTGTT":325696, "CTGTC":202779, "CTGTG":185817, "CTGCA":387846, "CTGCT":437247, "CTGCC":391736, "CTGCG":386044, "CTGGA":369514, "CTGGT":381898, "CTGGC":573511, "CTGGG":300428, "CCAAA":271115, "CCAAT":213168, "CCAAC":310824, "CCAAG":217539, "CCATA":193296, "CCATT":273724, "CCATC":359663, "CCATG":285178, "CCACA":271313, "CCACT":201440, "CCACC":498182, "CCACG":309471, "CCAGA":327473, "CCAGT":284648, "CCAGC":674030, "CCAGG":426434, "CCTAA":108728, "CCTAT":110207, "CCTAC":132570, "CCTAG":45643, "CCTTA":137148, "CCTTT":261164, "CCTTC":288250, "CCTTG":274194, "CCTCA":182480, "CCTCT":146153, "CCTCC":194130, "CCTCG":240284, "CCTGA":329691, "CCTGT":246259, "CCTGC":488970, "CCTGG":423825, "CCCAA":210566, "CCCAT":212023, "CCCAC":312218, "CCCAG":352775, "CCCTA":90543, "CCCTT":201394, "CCCTC":183246, "CCCTG":348064, "CCCCA":299154, "CCCCT":204129, "CCCCC":549768, "CCCCG":320138, "CCCGA":216596, "CCCGT":197527, "CCCGC":444389, "CCCGG":344605, "CCGAA":267182, "CCGAT":265311, "CCGAC":290040, "CCGAG":211736, "CCGTA":182272, "CCGTT":262026, "CCGTC":251154, "CCGTG":255525, "CCGCA":350217, "CCGCT":338874, "CCGCC":632864, "CCGCG":399033, "CCGGA":264012, "CCGGT":310616, "CCGGC":541320, "CCGGG":295648, "CGAAA":291112, "CGAAT":190808, "CGAAC":285807, "CGAAG":313226, "CGATA":250195, "CGATT":225155, "CGATC":312940, "CGATG":371928, "CGACA":278338, "CGACT":165211, "CGACC":318811, "CGACG":308285, "CGAGA":179135, "CGAGT":139027, "CGAGC":283696, "CGAGG":221987, "CGTAA":193321, "CGTAT":172035, "CGTAC":157936, "CGTAG":156388, "CGTTA":206986, "CGTTT":281608, "CGTTC":256534, "CGTTG":296429, "CGTCA":281011, "CGTCT":163017, "CGTCC":203390, "CGTCG":352467, "CGTGA":228469, "CGTGT":190540, "CGTGC":265268, "CGTGG":272208, "CGCAA":290523, "CGCAT":262492, "CGCAC":295034, "CGCAG":409494, "CGCTA":166800, "CGCTT":293650, "CGCTC":252052, "CGCTG":572531, "CGCCA":566006, "CGCCT":364530, "CGCCC":504839, "CGCCG":667096, "CGCGA":293445, "CGCGT":250672, "CGCGC":522398, "CGCGG":376319, "CGGAA":350984, "CGGAT":225620, "CGGAC":173420, "CGGAG":156989, "CGGTA":241446, "CGGTT":256540, "CGGTC":250282, "CGGTG":414196, "CGGCA":473262, "CGGCT":294013, "CGGCC":495059, "CGGCG":603656, "CGGGA":187061, "CGGGT":250429, "CGGGC":343287, "CGGGG":210517, "GAAAA":493802, "GAAAT":345434, "GAAAC":301298, "GAAAG":359908, "GAATA":263741, "GAATT":243596, "GAATC":197937, "GAATG":224774, "GAACA":357407, "GAACT":252302, "GAACC":237587, "GAACG":287839, "GAAGA":463555, "GAAGT":252815, "GAAGC":333448, "GAAGG":274059, "GATAA":332373, "GATAT":285687, "GATAC":203250, "GATAG":179911, "GATTA":270334, "GATTT":351901, "GATTC":198801, "GATTG":245556, "GATCA":332286, "GATCT":247067, "GATCC":234606, "GATCG":377543, "GATGA":386674, "GATGT":265669, "GATGC":347797, "GATGG":329255, "GACAA":245880, "GACAT":202326, "GACAC":176401, "GACAG":221444, "GACTA":112349, "GACTT":170311, "GACTC":112152, "GACTG":168287, "GACCA":291943, "GACCT":207708, "GACCC":193654, "GACCG":268108, "GACGA":260018, "GACGT":173200, "GACGC":276493, "GACGG":236539, "GAGAA":238238, "GAGAT":218288, "GAGAC":118965, "GAGAG":141727, "GAGTA":140567, "GAGTT":190039, "GAGTC":110722, "GAGTG":175879, "GAGCA":288067, "GAGCT":198487, "GAGCC":192678, "GAGCG":328323, "GAGGA":173056, "GAGGT":163048, "GAGGC":193328, "GAGGG":167350, "GTAAA":295562, "GTAAT":226724, "GTAAC":186645, "GTAAG":156386, "GTATA":140895, "GTATT":245157, "GTATC":205396, "GTATG":156285, "GTACA":188277, "GTACT":177283, "GTACC":176296, "GTACG":151131, "GTAGA":187311, "GTAGT":149510, "GTAGC":175789, "GTAGG":182067, "GTTAA":316890, "GTTAT":240651, "GTTAC":179233, "GTTAG":124380, "GTTTA":246446, "GTTTT":389407, "GTTTC":275320, "GTTTG":249801, "GTTCA":317312, "GTTCT":241846, "GTTCC":218131, "GTTCG":259608, "GTTGA":312179, "GTTGT":243074, "GTTGC":306887, "GTTGG":236788, "GTCAA":226897, "GTCAT":239154, "GTCAC":207462, 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"ACGCT":258153, "ACGCC":354569, "ACGCG":235584, "ACGGA":150385, "ACGGT":240166, "ACGGC":332062, "ACGGG":164071, "AGAAA":399397, "AGAAT":230099, "AGAAC":255931, "AGAAG":287839, "AGATA":229868, "AGATT":231199, "AGATC":262142, "AGATG":252477, "AGACA":153796, "AGACT":109067, "AGACC":181511, "AGACG":161940, "AGAGA":172779, "AGAGT":128279, "AGAGC":213634, "AGAGG":136930, "AGTAA":193021, "AGTAT":169468, "AGTAC":178550, "AGTAG":113395, "AGTTA":174045, "AGTTT":250253, "AGTTC":248872, "AGTTG":223051, "AGTCA":186142, "AGTCT":107131, "AGTCC":113031, "AGTCG":161453, "AGTGA":185118, "AGTGT":124402, "AGTGC":180646, "AGTGG":177911, "AGCAA":326340, "AGCAT":271993, "AGCAC":313560, "AGCAG":469471, "AGCTA":132454, "AGCTT":242765, "AGCTC":202650, "AGCTG":381806, "AGCCA":300750, "AGCCT":208409, "AGCCC":225794, "AGCCG":304350, "AGCGA":268924, "AGCGT":257540, "AGCGC":466307, "AGCGG":328236, "AGGAA":246141, "AGGAT":220887, "AGGAC":134558, "AGGAG":147384, "AGGTA":176811, "AGGTT":225261, "AGGTC":207340, 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"CCCCT":134441, "CCCCC":119161, "CCCCG":182232, "CCCGA":173273, "CCCGT":162712, "CCCGC":311837, "CCCGG":262869, "CCGAA":243436, "CCGAT":264165, "CCGAC":255471, "CCGAG":209363, "CCGTA":156316, "CCGTT":247305, "CCGTC":249293, "CCGTG":249252, "CCGCA":307700, "CCGCT":324807, "CCGCC":497014, "CCGCG":364525, "CCGGA":229292, "CCGGT":287518, "CCGGC":483773, "CCGGG":263694, "CGAAA":280648, "CGAAT":192544, "CGAAC":267698, "CGAAG":322303, "CGATA":255620, "CGATT":227988, "CGATC":321959, "CGATG":399096, "CGACA":266041, "CGACT":162975, "CGACC":290367, "CGACG":298767, "CGAGA":173624, "CGAGT":132642, "CGAGC":286420, "CGAGG":228705, "CGTAA":184250, "CGTAT":183057, "CGTAC":145019, "CGTAG":145271, "CGTTA":197795, "CGTTT":277592, "CGTTC":248508, "CGTTG":302087, "CGTCA":284516, "CGTCT":203926, "CGTCC":168263, "CGTCG":295924, "CGTGA":229763, "CGTGT":133959, "CGTGC":267899, "CGTGG":272635, "CGCAA":277053, "CGCAT":265778, "CGCAC":255927, "CGCAG":409600, "CGCTA":161797, "CGCTT":296152, "CGCTC":247605, "CGCTG":605396, "CGCCA":556853, "CGCCT":357619, "CGCCC":363010, "CGCCG":612593, "CGCGA":297660, "CGCGT":233212, "CGCGC":514861, "CGCGG":364259, "CGGAA":249703, "CGGAT":228534, "CGGAC":143590, "CGGAG":145392, "CGGTA":235729, "CGGTT":250943, "CGGTC":239747, "CGGTG":404096, "CGGCA":473444, "CGGCT":301794, "CGGCC":434177, "CGGCG":614154, "CGGGA":164594, "CGGGT":233444, "CGGGC":328428, "CGGGG":183030, "GAAAA":486944, "GAAAT":372928, "GAAAC":285102, "GAAAG":289470, "GAATA":258910, "GAATT":247539, "GAATC":198912, "GAATG":229150, "GAACA":335035, "GAACT":274864, "GAACC":213654, "GAACG":253241, "GAAGA":398170, "GAAGT":263506, "GAAGC":333986, "GAAGG":271276, "GATAA":329158, "GATAT":294109, "GATAC":198658, "GATAG":177844, "GATTA":221904, "GATTT":361733, "GATTC":196852, "GATTG":254011, "GATCA":346234, "GATCT":242510, "GATCC":229567, "GATCG":346855, "GATGA":405626, "GATGT":278543, "GATGC":369514, "GATGG":348702, "GACAA":228737, "GACAT":199431, "GACAC":149899, "GACAG":204383, "GACTA":102696, "GACTT":171866, "GACTC":106616, "GACTG":167099, "GACCA":282433, "GACCT":207308, "GACCC":156838, "GACCG":241548, "GACGA":255075, "GACGT":166685, "GACGC":267194, "GACGG":227418, "GAGAA":234415, "GAGAT":208948, "GAGAC":107682, "GAGAG":123162, "GAGTA":129220, "GAGTT":190554, "GAGTC":104875, "GAGTG":125497, "GAGCA":316706, "GAGCT":203329, "GAGCC":179540, "GAGCG":252881, "GAGGA":171558, "GAGGT":163937, "GAGGC":195537, "GAGGG":126241, "GTAAA":277674, "GTAAT":228629, "GTAAC":172598, "GTAAG":136959, "GTATA":132919, "GTATT":249581, "GTATC":196497, "GTATG":181130, "GTACA":175587, "GTACT":177732, "GTACC":166989, "GTACG":144033, "GTAGA":148408, "GTAGT":145747, "GTAGC":170116, "GTAGG":112287, "GTTAA":247464, "GTTAT":242506, "GTTAC":169794, "GTTAG":115772, "GTTTA":237697, "GTTTT":393090, "GTTTC":274300, "GTTTG":256847, "GTTCA":320687, "GTTCT":244598, "GTTCC":206118, "GTTCG":263970, "GTTGA":323599, "GTTGT":247429, "GTTGC":314619, "GTTGG":244048, "GTCAA":223768, "GTCAT":244337, "GTCAC":223485, 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"ATGCG":250277, "ATGGA":230159, "ATGGT":273058, "ATGGC":354919, "ATGGG":180996, "ACAAA":384756, "ACAAT":243620, "ACAAC":339836, "ACAAG":223582, "ACATA":193345, "ACATT":230106, "ACATC":303581, "ACATG":189560, "ACACA":249760, "ACACT":157943, "ACACC":329641, "ACACG":171119, "ACAGA":235446, "ACAGT":177054, "ACAGC":350543, "ACAGG":252600, "ACTAA":160440, "ACTAT":165927, "ACTAC":170997, "ACTAG":56210, "ACTTA":149850, "ACTTT":250412, "ACTTC":266972, "ACTTG":162698, "ACTCA":185257, "ACTCT":135274, "ACTCC":147305, "ACTCG":141332, "ACTGA":233401, "ACTGT":167529, "ACTGC":252833, "ACTGG":282750, "ACCAA":310216, "ACCAT":297971, "ACCAC":363760, "ACCAG":407217, "ACCTA":117409, "ACCTT":257533, "ACCTC":184318, "ACCTG":354571, "ACCCA":259917, "ACCCT":196173, "ACCCC":277509, "ACCCG":277357, "ACCGA":263049, "ACCGT":247506, "ACCGC":391798, "ACCGG":319028, "ACGAA":259515, "ACGAT":252168, "ACGAC":221501, "ACGAG":167013, "ACGTA":144076, "ACGTT":232390, "ACGTC":179114, "ACGTG":168830, "ACGCA":247305, "ACGCT":254990, "ACGCC":390944, "ACGCG":246492, "ACGGA":187561, "ACGGT":243731, "ACGGC":340677, "ACGGG":179148, "AGAAA":383548, "AGAAT":236327, "AGAAC":293296, "AGAAG":285679, "AGATA":241373, "AGATT":280745, "AGATC":330227, "AGATG":247052, "AGACA":176234, "AGACT":119234, "AGACC":211879, "AGACG":169085, "AGAGA":195667, "AGAGT":189682, "AGAGC":281771, "AGAGG":160125, "AGTAA":201717, "AGTAT":173000, "AGTAC":184546, "AGTAG":123901, "AGTTA":182073, "AGTTT":251587, "AGTTC":243754, "AGTTG":214915, "AGTCA":166890, "AGTCT":109692, "AGTCC":120308, "AGTCG":162058, "AGTGA":188116, "AGTGT":214877, "AGTGC":180779, "AGTGG":180306, "AGCAA":329407, "AGCAT":271558, "AGCAC":305585, "AGCAG":446112, "AGCTA":136995, "AGCTT":242684, "AGCTC":202504, "AGCTG":359373, "AGCCA":305697, "AGCCT":213369, "AGCCC":270947, "AGCCG":315737, "AGCGA":270044, "AGCGT":320048, "AGCGC":465831, "AGCGG":334833, "AGGAA":259696, "AGGAT":212165, "AGGAC":143946, "AGGAG":153622, "AGGTA":178837, "AGGTT":224404, "AGGTC":202654, "AGGTG":258337, "AGGCA":212965, "AGGCT":200066, "AGGCC":320327, "AGGCG":341507, "AGGGA":215181, "AGGGT":192176, "AGGGC":257166, "AGGGG":157517, "TAAAA":484840, "TAAAT":324927, "TAAAC":266870, "TAAAG":291425, "TAATA":278973, "TAATT":262047, "TAATC":227131, "TAATG":256350, "TAACA":250285, "TAACT":187046, "TAACC":214460, "TAACG":208024, "TAAGA":220505, "TAAGT":144320, "TAAGC":170516, "TAAGG":133499, "TATAA":239478, "TATAT":212698, "TATAC":145178, "TATAG":125889, "TATTA":270023, "TATTT":372039, "TATTC":254079, "TATTG":253511, "TATCA":321542, "TATCT":223015, "TATCC":206076, "TATCG":245221, "TATGA":209436, "TATGT":153528, "TATGC":176225, "TATGG":175107, "TACAA":228703, "TACAT":192259, "TACAC":171837, "TACAG":204036, "TACTA":123734, "TACTT":195487, "TACTC":136854, "TACTG":217283, "TACCA":240655, "TACCT":179633, "TACCC":178580, "TACCG":238991, "TACGA":157069, "TACGT":136260, "TACGC":197453, "TACGG":161990, "TAGAA":174204, "TAGAT":181485, "TAGAC":96899, "TAGAG":115304, "TAGTA":118794, 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"CACGT":175257, "CACGC":336853, "CACGG":273992, "CAGAA":354035, "CAGAT":321217, "CAGAC":244795, "CAGAG":202934, "CAGTA":225131, "CAGTT":302309, "CAGTC":173757, "CAGTG":230932, "CAGCA":620769, "CAGCT":364804, "CAGCC":454450, "CAGCG":579383, "CAGGA":306199, "CAGGT":347320, "CAGGC":488122, "CAGGG":321088, "CTAAA":210677, "CTAAT":144599, "CTAAC":138793, "CTAAG":96226, "CTATA":129120, "CTATT":173267, "CTATC":178618, "CTATG":140478, "CTACA":178153, "CTACT":121254, "CTACC":179379, "CTACG":149415, "CTAGA":59501, "CTAGT":49492, "CTAGC":66918, "CTAGG":46830, "CTTAA":179904, "CTTAT":179002, "CTTAC":149152, "CTTAG":94311, "CTTTA":290407, "CTTTT":368180, "CTTTC":291496, "CTTTG":270850, "CTTCA":363760, "CTTCT":279971, "CTTCC":287543, "CTTCG":309293, "CTTGA":260232, "CTTGT":196604, "CTTGC":274607, "CTTGG":197738, "CTCAA":238442, "CTCAT":186059, "CTCAC":174152, "CTCAG":181271, "CTCTA":110349, "CTCTT":212528, "CTCTC":127719, "CTCTG":178798, "CTCCA":221315, "CTCCT":155887, "CTCCC":171839, "CTCCG":161546, "CTCGA":210071, "CTCGT":150247, "CTCGC":246228, "CTCGG":230057, "CTGAA":369023, "CTGAT":373612, "CTGAC":290397, "CTGAG":178658, "CTGTA":198745, "CTGTT":325696, "CTGTC":202779, "CTGTG":185817, "CTGCA":387846, "CTGCT":437247, "CTGCC":391736, "CTGCG":386044, "CTGGA":369514, "CTGGT":381898, "CTGGC":573511, "CTGGG":300428, "CCAAA":271115, "CCAAT":213168, "CCAAC":310824, "CCAAG":217539, "CCATA":193296, "CCATT":273724, "CCATC":359663, "CCATG":285178, "CCACA":271313, "CCACT":201440, "CCACC":498182, "CCACG":309471, "CCAGA":327473, "CCAGT":284648, "CCAGC":674030, "CCAGG":426434, "CCTAA":108728, "CCTAT":110207, "CCTAC":132570, "CCTAG":45643, "CCTTA":137148, "CCTTT":261164, "CCTTC":288250, "CCTTG":274194, "CCTCA":182480, "CCTCT":146153, "CCTCC":194130, "CCTCG":240284, "CCTGA":329691, "CCTGT":246259, "CCTGC":488970, "CCTGG":423825, "CCCAA":210566, "CCCAT":212023, "CCCAC":312218, "CCCAG":352775, "CCCTA":90543, "CCCTT":201394, "CCCTC":183246, "CCCTG":348064, "CCCCA":299154, "CCCCT":204129, "CCCCC":549768, "CCCCG":320138, "CCCGA":216596, "CCCGT":197527, "CCCGC":444389, "CCCGG":344605, "CCGAA":267182, "CCGAT":265311, "CCGAC":290040, "CCGAG":211736, "CCGTA":182272, "CCGTT":262026, "CCGTC":251154, "CCGTG":255525, "CCGCA":350217, "CCGCT":338874, "CCGCC":632864, "CCGCG":399033, "CCGGA":264012, "CCGGT":310616, "CCGGC":541320, "CCGGG":295648, "CGAAA":291112, "CGAAT":190808, "CGAAC":285807, "CGAAG":313226, "CGATA":250195, "CGATT":225155, "CGATC":312940, "CGATG":371928, "CGACA":278338, "CGACT":165211, "CGACC":318811, "CGACG":308285, "CGAGA":179135, "CGAGT":139027, "CGAGC":283696, "CGAGG":221987, "CGTAA":193321, "CGTAT":172035, "CGTAC":157936, "CGTAG":156388, "CGTTA":206986, "CGTTT":281608, "CGTTC":256534, "CGTTG":296429, "CGTCA":281011, "CGTCT":163017, "CGTCC":203390, "CGTCG":352467, "CGTGA":228469, "CGTGT":190540, "CGTGC":265268, "CGTGG":272208, "CGCAA":290523, "CGCAT":262492, "CGCAC":295034, "CGCAG":409494, "CGCTA":166800, "CGCTT":293650, "CGCTC":252052, "CGCTG":572531, "CGCCA":566006, "CGCCT":364530, "CGCCC":504839, "CGCCG":667096, "CGCGA":293445, "CGCGT":250672, "CGCGC":522398, "CGCGG":376319, "CGGAA":350984, "CGGAT":225620, "CGGAC":173420, "CGGAG":156989, "CGGTA":241446, "CGGTT":256540, "CGGTC":250282, "CGGTG":414196, "CGGCA":473262, "CGGCT":294013, "CGGCC":495059, "CGGCG":603656, "CGGGA":187061, "CGGGT":250429, "CGGGC":343287, "CGGGG":210517, "GAAAA":493802, "GAAAT":345434, "GAAAC":301298, "GAAAG":359908, "GAATA":263741, "GAATT":243596, "GAATC":197937, "GAATG":224774, "GAACA":357407, "GAACT":252302, "GAACC":237587, "GAACG":287839, "GAAGA":463555, "GAAGT":252815, "GAAGC":333448, "GAAGG":274059, "GATAA":332373, "GATAT":285687, "GATAC":203250, "GATAG":179911, "GATTA":270334, "GATTT":351901, "GATTC":198801, "GATTG":245556, "GATCA":332286, "GATCT":247067, "GATCC":234606, "GATCG":377543, "GATGA":386674, "GATGT":265669, "GATGC":347797, "GATGG":329255, "GACAA":245880, "GACAT":202326, "GACAC":176401, "GACAG":221444, "GACTA":112349, "GACTT":170311, "GACTC":112152, "GACTG":168287, "GACCA":291943, "GACCT":207708, "GACCC":193654, "GACCG":268108, "GACGA":260018, "GACGT":173200, "GACGC":276493, "GACGG":236539, "GAGAA":238238, "GAGAT":218288, "GAGAC":118965, "GAGAG":141727, "GAGTA":140567, "GAGTT":190039, "GAGTC":110722, "GAGTG":175879, "GAGCA":288067, "GAGCT":198487, "GAGCC":192678, "GAGCG":328323, "GAGGA":173056, "GAGGT":163048, "GAGGC":193328, "GAGGG":167350, "GTAAA":295562, "GTAAT":226724, "GTAAC":186645, "GTAAG":156386, "GTATA":140895, "GTATT":245157, "GTATC":205396, "GTATG":156285, "GTACA":188277, "GTACT":177283, "GTACC":176296, "GTACG":151131, "GTAGA":187311, "GTAGT":149510, "GTAGC":175789, "GTAGG":182067, "GTTAA":316890, "GTTAT":240651, "GTTAC":179233, "GTTAG":124380, "GTTTA":246446, "GTTTT":389407, "GTTTC":275320, "GTTTG":249801, "GTTCA":317312, "GTTCT":241846, "GTTCC":218131, "GTTCG":259608, "GTTGA":312179, "GTTGT":243074, "GTTGC":306887, "GTTGG":236788, "GTCAA":226897, "GTCAT":239154, "GTCAC":207462, "GTCAG":277560, "GTCTA":89786, "GTCTT":184489, "GTCTC":109151, "GTCTG":210118, "GTCCA":194664, "GTCCT":141151, "GTCCC":121904, "GTCCG":157859, "GTCGA":268675, "GTCGT":236639, "GTCGC":306047, "GTCGG":269647, "GTGAA":286751, "GTGAT":302441, "GTGAC":198293, "GTGAG":148605, "GTGTA":225774, "GTGTT":273377, "GTGTC":151593, "GTGTG":142816, "GTGCA":235948, "GTGCT":267644, "GTGCC":251764, "GTGCG":236887, "GTGGA":211369, "GTGGT":306691, "GTGGC":324735, "GTGGG":186059, "GCAAA":342231, "GCAAT":284835, "GCAAC":334785, "GCAAG":285845, "GCATA":184274, "GCATT":269079, "GCATC":356455, "GCATG":261540, "GCACA":238634, "GCACT":189885, "GCACC":391141, "GCACG":285827, "GCAGA":330718, "GCAGT":244423, "GCAGC":562801, "GCAGG":467139, "GCTAA":177530, "GCTAT":183097, "GCTAC":173701, "GCTAG":64716, "GCTTA":165710, "GCTTT":338738, "GCTTC":322751, "GCTTG":268133, "GCTCA":257739, "GCTCT":181421, "GCTCC":192184, "GCTCG":268725, "GCTGA":429585, "GCTGT":310058, "GCTGC":557475, "GCTGG":620145, "GCCAA":313317, "GCCAT":363479, "GCCAC":376845, "GCCAG":572204, "GCCTA":109184, "GCCTT":297002, "GCCTC":218168, "GCCTG":478524, "GCCCA":352463, "GCCCT":278480, "GCCCC":356432, "GCCCG":401880, "GCCGA":419335, "GCCGT":350165, "GCCGC":625694, "GCCGG":508499, "GCGAA":303278, "GCGAT":342505, "GCGAC":290363, "GCGAG":233715, "GCGTA":201571, "GCGTT":305626, "GCGTC":324889, "GCGTG":301605, "GCGCA":465748, "GCGCT":429658, "GCGCC":613644, "GCGCG":501910, "GCGGA":246115, "GCGGT":345449, "GCGGC":578151, "GCGGG":323739, "GGAAA":397527, "GGAAT":199419, "GGAAC":235583, "GGAAG":366995, "GGATA":201622, "GGATT":212328, "GGATC":218410, "GGATG":262684, "GGACA":187625, "GGACT":115688, "GGACC":122110, "GGACG":188748, "GGAGA":188176, "GGAGT":125462, "GGAGC":183695, "GGAGG":155696, "GGTAA":268018, "GGTAT":206655, "GGTAC":172270, "GGTAG":180605, "GGTTA":213775, "GGTTT":294718, "GGTTC":215601, "GGTTG":273460, "GGTCA":303913, "GGTCT":175172, "GGTCC":122981, "GGTCG":305501, "GGTGA":359081, "GGTGT":247202, "GGTGC":347130, "GGTGG":379421, "GGCAA":358133, "GGCAT":295754, "GGCAC":262772, "GGCAG":362893, "GGCTA":152169, "GGCTT":284679, "GGCTC":173367, "GGCTG":388596, "GGCCA":435396, "GGCCT":314482, "GGCCC":302454, "GGCCG":447888, "GGCGA":424720, "GGCGT":343610, "GGCGC":569837, "GGCGG":488919, "GGGAA":284540, "GGGAT":184319, "GGGAC":109600, "GGGAG":133737, "GGGTA":176308, "GGGTT":220507, "GGGTC":163453, "GGGTG":248083, "GGGCA":283910, "GGGCT":218147, "GGGCC":247247, "GGGCG":359735, "GGGGA":157813, "GGGGT":163680, "GGGGC":218009, "GGGGG":152551 }, "overrepresented_sequences": { } }, "command": "fastp --thread 1 --report_title fastp report for SRR17619849_Palapye_Effluent_wastewater_fastq.fastq.gz -i SRR17619849_Palapye_Effluent_wastewater_fastq.fastq.gz -o first.fastq.gz -I SRR17619849_Palapye_Effluent_wastewater_fastq_R2.fastq.gz -O second.fastq.gz -A --detect_adapter_for_pe -Q -L " }