Mercurial > repos > public-health-bioinformatics > screen_abricate_report

diff test-data/SAMN13042171-abricate_report_screened.tsv @ 4:22247b1a59d5 draft default tip

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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/screen_abricate_report commit ae10b1f55b2356bea735a994619288f7575430cb"
author public-health-bioinformatics
date Fri, 03 Jan 2020 14:30:22 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/SAMN13042171-abricate_report_screened.tsv	Fri Jan 03 14:30:22 2020 -0500
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+#FILE	SEQUENCE	START	END	STRAND	GENE	COVERAGE	COVERAGE_MAP	GAPS	%COVERAGE	%IDENTITY	DATABASE	ACCESSION	PRODUCT	RESISTANCE
+SAMN13042171.fasta	contig00063	2498	3310	-	NDM-1	1-813/813	===============	0/0	100.00	100.00	card	FN396876:2407-3220	NDM-1 is a metallo-beta-lactamase isolated from Klebsiella pneumoniae with nearly complete resistance to all beta-lactam antibiotics.	cephalosporin/penam/carbapenem/cephamycin
+SAMN13042171.fasta	contig00035	9413	10237	-	OXA-9	1-825/825	===============	0/0	100.00	100.00	card	M55547:1-826	OXA-9 is a beta-lactamase found in Klebsiella pneumoniae.	cephalosporin/penam