Mercurial > repos > q2d2 > qiime2__composition__ancom

comparison qiime2__composition__ancom.xml @ 2:e3a9e7cb7b77 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__composition commit 65e4952f33eb335528e8553150e9097e5ea8f556
author q2d2
date Thu, 08 Jun 2023 19:34:40 +0000
parents 4696fc685d83
children e3fdc3dc9fcc
comparison
equal deleted inserted replaced
1:4696fc685d83 2:e3a9e7cb7b77
4 4
5 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) 5 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause)
6 --> 6 -->
7 <!-- 7 <!--
8 This tool was automatically generated by: 8 This tool was automatically generated by:
9 q2galaxy (version: 2022.11.1) 9 q2galaxy (version: 2023.5.0)
10 for: 10 for:
11 qiime2 (version: 2022.11.1) 11 qiime2 (version: 2023.5.1)
12 --> 12 -->
13 <tool name="qiime2 composition ancom" id="qiime2__composition__ancom" version="2022.11.2+q2galaxy.2022.11.1.2" profile="22.05" license="BSD-3-Clause"> 13 <tool name="qiime2 composition ancom" id="qiime2__composition__ancom" version="2023.5.0+q2galaxy.2023.5.0.2" profile="22.05" license="BSD-3-Clause">
14 <description>Apply ANCOM to identify features that differ in abundance.</description> 14 <description>Apply ANCOM to identify features that differ in abundance.</description>
15 <requirements> 15 <requirements>
16 <container type="docker">quay.io/qiime2/core:2022.11</container> 16 <container type="docker">quay.io/qiime2/core:2023.5</container>
17 </requirements> 17 </requirements>
18 <version_command>q2galaxy version composition</version_command> 18 <version_command>q2galaxy version composition</version_command>
19 <command detect_errors="exit_code">q2galaxy run composition ancom '$inputs'</command> 19 <command detect_errors="exit_code">q2galaxy run composition ancom '$inputs'</command>
20 <configfiles> 20 <configfiles>
21 <inputs name="inputs" data_style="paths"/> 21 <inputs name="inputs" data_style="paths"/>
54 <param name="difference_function" type="select" label="difference_function: Str % Choices('mean_difference', 'f_statistic')" display="radio"> 54 <param name="difference_function" type="select" label="difference_function: Str % Choices('mean_difference', 'f_statistic')" display="radio">
55 <option value="__q2galaxy__::literal::None" selected="true">None (Use default behavior)</option> 55 <option value="__q2galaxy__::literal::None" selected="true">None (Use default behavior)</option>
56 <option value="mean_difference">mean_difference</option> 56 <option value="mean_difference">mean_difference</option>
57 <option value="f_statistic">f_statistic</option> 57 <option value="f_statistic">f_statistic</option>
58 </param> 58 </param>
59 <param name="filter_missing" type="boolean" truevalue="__q2galaxy__::literal::True" falsevalue="__q2galaxy__::literal::False" label="filter_missing: Bool" help="[default: No] If True, samples with missing metadata values will be filtered from the table prior to analysis. If False, an error will be raised if there are any missing metadata values."/>
59 </section> 60 </section>
60 </inputs> 61 </inputs>
61 <outputs> 62 <outputs>
62 <data name="visualization" format="qzv" label="${tool.name} on ${on_string}: visualization.qzv" from_work_dir="visualization.qzv"/> 63 <data name="visualization" format="qzv" label="${tool.name} on ${on_string}: visualization.qzv" from_work_dir="visualization.qzv"/>
63 </outputs> 64 </outputs>