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comparison qiime2__composition__da_barplot.xml @ 1:c2690db851b5 draft

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planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__composition commit 389df0134cd0763dcf02aac6e623fc15f8861c1e
author q2d2
date Thu, 25 Apr 2024 20:53:10 +0000
parents de8a1f53761e
children 915545a7c0f9
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0:de8a1f53761e 1:c2690db851b5
1 <?xml version='1.0' encoding='utf-8'?> 1 <?xml version='1.0' encoding='utf-8'?>
2 <!-- 2 <!--
3 Copyright (c) 2023, QIIME 2 development team. 3 Copyright (c) 2024, QIIME 2 development team.
4 4
5 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) 5 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause)
6 --> 6 -->
7 <!-- 7 <!--
8 This tool was automatically generated by: 8 This tool was automatically generated by:
9 q2galaxy (version: 2023.5.0) 9 q2galaxy (version: 2024.2.1)
10 for: 10 for:
11 qiime2 (version: 2023.5.1) 11 qiime2 (version: 2024.2.0)
12 --> 12 -->
13 <tool name="qiime2 composition da-barplot" id="qiime2__composition__da_barplot" version="2023.5.0+q2galaxy.2023.5.0.2" profile="22.05" license="BSD-3-Clause"> 13 <tool name="qiime2 composition da-barplot" id="qiime2__composition__da_barplot" version="2024.2.0+q2galaxy.2024.2.1" profile="22.05" license="BSD-3-Clause">
14 <description>Differential abundance bar plots</description> 14 <description>Differential abundance bar plots</description>
15 <requirements> 15 <requirements>
16 <container type="docker">quay.io/qiime2/core:2023.5</container> 16 <container type="docker">quay.io/qiime2/amplicon:2024.2</container>
17 </requirements> 17 </requirements>
18 <version_command>q2galaxy version composition</version_command> 18 <version_command>q2galaxy version composition</version_command>
19 <command detect_errors="exit_code">q2galaxy run composition da_barplot '$inputs'</command> 19 <command detect_errors="exit_code">q2galaxy run composition da_barplot '$inputs'</command>
20 <configfiles> 20 <configfiles>
21 <inputs name="inputs" data_style="paths"/> 21 <inputs name="inputs" data_style="staging_path_and_source_path"/>
22 </configfiles> 22 </configfiles>
23 <inputs> 23 <inputs>
24 <param name="data" type="data" format="qza" label="data: FeatureData[DifferentialAbundance]" help="[required] The ANCOM-BC output to be plotted."> 24 <param name="data" type="data" format="qza" label="data: FeatureData[DifferentialAbundance]" help="[required] The ANCOM-BC output to be plotted.">
25 <options options_filter_attribute="metadata.semantic_type"> 25 <options options_filter_attribute="metadata.semantic_type">
26 <filter type="add_value" value="FeatureData[DifferentialAbundance]"/> 26 <filter type="add_value" value="FeatureData[DifferentialAbundance]"/>
78 <valid initial="string.printable"/> 78 <valid initial="string.printable"/>
79 </sanitizer> 79 </sanitizer>
80 </param> 80 </param>
81 </when> 81 </when>
82 </conditional> 82 </conditional>
83 <param name="label_limit" type="integer" optional="true" label="label_limit: Int" help="[optional] Set the maximum length that will be viewable for axis labels. You can set this parameter if your axis labels are being cut off."/>
83 </section> 84 </section>
84 </inputs> 85 </inputs>
85 <outputs> 86 <outputs>
86 <data name="visualization" format="qzv" label="${tool.name} on ${on_string}: visualization.qzv" from_work_dir="visualization.qzv"/> 87 <data name="visualization" format="qzv" label="${tool.name} on ${on_string}: visualization.qzv" from_work_dir="visualization.qzv"/>
87 </outputs> 88 </outputs>