# HG changeset patch
# User q2d2
# Date 1752616162 0
# Node ID b358fb10943e981c6d3910c39e65f9da53456b3b
# Parent  36aa7a55e75661c8844845e22483ee4695c93016
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__demux commit 9436cc47c72b58a6a3d3a5c2ee075689c2926ef0

diff -r 36aa7a55e756 -r b358fb10943e qiime2__demux__subsample_paired.xml
--- a/qiime2__demux__subsample_paired.xml	Mon May 05 18:43:18 2025 +0000
+++ b/qiime2__demux__subsample_paired.xml	Tue Jul 15 21:49:22 2025 +0000
@@ -6,17 +6,17 @@
 -->
 <!--
 This tool was automatically generated by:
-    q2galaxy (version: 2025.4.0)
+    q2galaxy (version: 2025.7.0)
 for:
-    qiime2 (version: 2025.4.0)
+    qiime2 (version: 2025.7.0)
 -->
-<tool name="qiime2 demux subsample-paired" id="qiime2__demux__subsample_paired" version="2025.4.0+q2galaxy.2025.4.0" profile="22.05" license="BSD-3-Clause">
+<tool name="qiime2 demux subsample-paired" id="qiime2__demux__subsample_paired" version="2025.7.0+q2galaxy.2025.7.0" profile="22.05" license="BSD-3-Clause">
     <description>Subsample paired-end sequences without replacement.</description>
     <xrefs>
         <xref type="bio.tools">qiime2</xref>
     </xrefs>
     <requirements>
-        <container type="docker">quay.io/qiime2/amplicon:2025.4</container>
+        <container type="docker">quay.io/qiime2/amplicon:2025.7</container>
     </requirements>
     <version_command>q2galaxy version demux</version_command>
     <command detect_errors="exit_code">q2galaxy run demux subsample_paired '$inputs'</command>
@@ -31,6 +31,9 @@
             <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['SampleData[PairedEndSequencesWithQuality]']</validator>
         </param>
         <param name="fraction" type="float" min="1e-06" max="0.999999" value="" label="fraction: Float % Range(0, 1, inclusive_start=False)" help="[required]  The fraction of sequences to retain in subsample."/>
+        <section name="__q2galaxy__GUI__section__extra_opts__" title="Click here for additional options">
+            <param name="drop_empty" type="boolean" truevalue="__q2galaxy__::literal::True" falsevalue="__q2galaxy__::literal::False" label="drop_empty: Bool" help="[default: No]  Whether to drop empty samples."/>
+        </section>
     </inputs>
     <outputs>
         <data name="subsampled_sequences" format="qza" label="${tool.name} on ${on_string}: subsampled_sequences.qza" from_work_dir="subsampled_sequences.qza"/>
diff -r 36aa7a55e756 -r b358fb10943e test-data/emp_single.test0.sequences.qza
Binary file test-data/emp_single.test0.sequences.qza has changed
diff -r 36aa7a55e756 -r b358fb10943e test-data/summarize.test0.demux.qza
Binary file test-data/summarize.test0.demux.qza has changed