# HG changeset patch
# User q2d2
# Date 1730317042 0
# Node ID 1a13e87462a040e6c0890efe36fc66c489f0f7e4
# Parent acb0f883737928c93e0769b6c1d930cbc7d7e6d3
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__demux commit 5f71b597c9495eae67a447744fded834f56ca1f7
diff -r acb0f8837379 -r 1a13e87462a0 qiime2__demux__summarize.xml
--- a/qiime2__demux__summarize.xml Mon Jun 03 23:18:02 2024 +0000
+++ b/qiime2__demux__summarize.xml Wed Oct 30 19:37:22 2024 +0000
@@ -6,14 +6,17 @@
-->
<!--
This tool was automatically generated by:
- q2galaxy (version: 2024.5.0)
+ q2galaxy (version: 2024.10.0)
for:
- qiime2 (version: 2024.5.0)
+ qiime2 (version: 2024.10.1)
-->
-<tool name="qiime2 demux summarize" id="qiime2__demux__summarize" version="2024.5.0+q2galaxy.2024.5.0" profile="22.05" license="BSD-3-Clause">
+<tool name="qiime2 demux summarize" id="qiime2__demux__summarize" version="2024.10.0+q2galaxy.2024.10.0" profile="22.05" license="BSD-3-Clause">
<description>Summarize counts per sample.</description>
+ <xrefs>
+ <xref type="bio.tools">qiime2</xref>
+ </xrefs>
<requirements>
- <container type="docker">quay.io/qiime2/amplicon:2024.5</container>
+ <container type="docker">quay.io/qiime2/amplicon:2024.10</container>
</requirements>
<version_command>q2galaxy version demux</version_command>
<command detect_errors="exit_code">q2galaxy run demux summarize '$inputs'</command>
@@ -23,9 +26,9 @@
<inputs>
<param name="data" type="data" format="qza" label="data: SampleData[SequencesWithQuality | PairedEndSequencesWithQuality | JoinedSequencesWithQuality]" help="[required] The demultiplexed sequences to be summarized.">
<options options_filter_attribute="metadata.semantic_type">
+ <filter type="add_value" value="SampleData[JoinedSequencesWithQuality]"/>
<filter type="add_value" value="SampleData[PairedEndSequencesWithQuality]"/>
<filter type="add_value" value="SampleData[SequencesWithQuality]"/>
- <filter type="add_value" value="SampleData[JoinedSequencesWithQuality]"/>
</options>
<validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['SampleData[JoinedSequencesWithQuality]', 'SampleData[PairedEndSequencesWithQuality]', 'SampleData[SequencesWithQuality]']</validator>
</param>
diff -r acb0f8837379 -r 1a13e87462a0 test-data/emp_single.test0.sequences.qza
Binary file test-data/emp_single.test0.sequences.qza has changed
diff -r acb0f8837379 -r 1a13e87462a0 test-data/summarize.test0.demux.qza
Binary file test-data/summarize.test0.demux.qza has changed