# HG changeset patch
# User q2d2
# Date 1752616545 0
# Node ID 86aee04ba5322db1f8e0191ba7d95d4e77b8fc7c
# Parent  26c3d6bc0754404446732510adcd1544bda84e51
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__feature_classifier commit 9436cc47c72b58a6a3d3a5c2ee075689c2926ef0

diff -r 26c3d6bc0754 -r 86aee04ba532 qiime2__feature_classifier__classify_hybrid_vsearch_sklearn.xml
--- a/qiime2__feature_classifier__classify_hybrid_vsearch_sklearn.xml	Mon May 05 18:49:43 2025 +0000
+++ b/qiime2__feature_classifier__classify_hybrid_vsearch_sklearn.xml	Tue Jul 15 21:55:45 2025 +0000
@@ -6,17 +6,17 @@
 -->
 <!--
 This tool was automatically generated by:
-    q2galaxy (version: 2025.4.0)
+    q2galaxy (version: 2025.7.0)
 for:
-    qiime2 (version: 2025.4.0)
+    qiime2 (version: 2025.7.0)
 -->
-<tool name="qiime2 feature-classifier classify-hybrid-vsearch-sklearn" id="qiime2__feature_classifier__classify_hybrid_vsearch_sklearn" version="2025.4.0+q2galaxy.2025.4.0" profile="22.05" license="BSD-3-Clause">
+<tool name="qiime2 feature-classifier classify-hybrid-vsearch-sklearn" id="qiime2__feature_classifier__classify_hybrid_vsearch_sklearn" version="2025.7.0+q2galaxy.2025.7.0" profile="22.05" license="BSD-3-Clause">
     <description>ALPHA Hybrid classifier: VSEARCH exact match + sklearn classifier</description>
     <xrefs>
         <xref type="bio.tools">qiime2</xref>
     </xrefs>
     <requirements>
-        <container type="docker">quay.io/qiime2/amplicon:2025.4</container>
+        <container type="docker">quay.io/qiime2/amplicon:2025.7</container>
     </requirements>
     <version_command>q2galaxy version feature_classifier</version_command>
     <command detect_errors="exit_code">q2galaxy run feature_classifier classify_hybrid_vsearch_sklearn '$inputs'</command>
@@ -116,10 +116,11 @@
                     <param name="confidence" type="float" min="0" max="1" value="0.7" label="confidence: Float % Range(0, 1, inclusive_end=True)" help="[default: 0.7]  Confidence threshold for limiting taxonomic depth. Set to &quot;disable&quot; to disable confidence calculation, or 0 to calculate confidence but not apply it to limit the taxonomic depth of the assignments."/>
                 </when>
             </conditional>
-            <param name="read_orientation" type="select" label="read_orientation: Str % Choices('same', 'reverse-complement', 'auto')" display="radio">
+            <param name="read_orientation" type="select" label="read_orientation: Str % Choices('same', 'reverse-complement', 'auto', 'both')" display="radio">
                 <option value="same">same</option>
                 <option value="reverse-complement">reverse-complement</option>
                 <option value="auto" selected="true">auto</option>
+                <option value="both">both</option>
             </param>
             <param name="prefilter" type="boolean" truevalue="__q2galaxy__::literal::True" falsevalue="__q2galaxy__::literal::False" checked="true" label="prefilter: Bool" help="[default: Yes]  Toggle positive filter of query sequences on or off."/>
             <param name="sample_size" type="integer" min="1" value="1000" label="sample_size: Int % Range(1, None)" help="[default: 1000]  Randomly extract the given number of sequences from the reference database to use for prefiltering. This parameter is ignored if `prefilter` is disabled."/>