# HG changeset patch
# User q2d2
# Date 1661802607 0
# Node ID 501989cbaea1313a6463a3a97290121bec69cb5d

planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__feature_classifier commit 9023cfd83495a517fbcbb6f91d5b01a6f1afcda1

diff -r 000000000000 -r 501989cbaea1 qiime2__feature_classifier__find_consensus_annotation.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/qiime2__feature_classifier__find_consensus_annotation.xml	Mon Aug 29 19:50:07 2022 +0000
@@ -0,0 +1,73 @@
+<?xml version='1.0' encoding='utf-8'?>
+<!--
+Copyright (c) 2022, QIIME 2 development team.
+
+Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause)
+-->
+<!--
+This tool was automatically generated by:
+    q2galaxy (version: 2022.8.1)
+for:
+    qiime2 (version: 2022.8.1)
+-->
+<tool name="qiime2 feature-classifier find-consensus-annotation" id="qiime2__feature_classifier__find_consensus_annotation" version="2022.8.0+q2galaxy.2022.8.1.2" profile="22.05" license="BSD-3-Clause">
+    <description>Find consensus among multiple annotations.</description>
+    <requirements>
+        <container type="docker">quay.io/qiime2/core:2022.8</container>
+    </requirements>
+    <version_command>q2galaxy version feature_classifier</version_command>
+    <command detect_errors="aggressive">q2galaxy run feature_classifier find_consensus_annotation '$inputs'</command>
+    <configfiles>
+        <inputs name="inputs" data_style="paths"/>
+    </configfiles>
+    <inputs>
+        <param name="search_results" type="data" format="qza" label="search_results: FeatureData[BLAST6]" help="[required]  Search results in BLAST6 output format">
+            <options options_filter_attribute="metadata.semantic_type">
+                <filter type="add_value" value="FeatureData[BLAST6]"/>
+            </options>
+            <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['FeatureData[BLAST6]']</validator>
+        </param>
+        <param name="reference_taxonomy" type="data" format="qza" label="reference_taxonomy: FeatureData[Taxonomy]" help="[required]  reference taxonomy labels.">
+            <options options_filter_attribute="metadata.semantic_type">
+                <filter type="add_value" value="FeatureData[Taxonomy]"/>
+            </options>
+            <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['FeatureData[Taxonomy]']</validator>
+        </param>
+        <section name="__q2galaxy__GUI__section__extra_opts__" title="Click here for additional options">
+            <param name="min_consensus" type="float" min="0.500001" max="1.0" value="0.51" label="min_consensus: Float % Range(0.5, 1.0, inclusive_start=False, inclusive_end=True)" help="[default: 0.51]  Minimum fraction of assignments must match top hit to be accepted as consensus assignment."/>
+            <param name="unassignable_label" type="text" value="Unassigned" label="unassignable_label: Str" help="[default: 'Unassigned']  Annotation given when no consensus is found.">
+                <sanitizer>
+                    <valid initial="string.printable"/>
+                </sanitizer>
+            </param>
+        </section>
+    </inputs>
+    <outputs>
+        <data name="consensus_taxonomy" format="qza" label="${tool.name} on ${on_string}: consensus_taxonomy.qza" from_work_dir="consensus_taxonomy.qza"/>
+    </outputs>
+    <tests/>
+    <help>
+QIIME 2: feature-classifier find-consensus-annotation
+=====================================================
+Find consensus among multiple annotations.
+
+
+Outputs:
+--------
+:consensus_taxonomy.qza: Consensus taxonomy and scores.
+
+|  
+
+Description:
+------------
+Find consensus annotation for each query searched against a reference database, by finding the least common ancestor among one or more semicolon-delimited hierarchical annotations. Note that the annotation hierarchy is assumed to have an even number of ranks.
+
+
+|  
+
+</help>
+    <citations>
+        <citation type="doi">10.1186/s40168-018-0470-z</citation>
+        <citation type="doi">10.1038/s41587-019-0209-9</citation>
+    </citations>
+</tool>
diff -r 000000000000 -r 501989cbaea1 test-data/.gitkeep