Mercurial > repos > q2d2 > qiime2__feature_table__merge_taxa
changeset 0:3828e8e6487f draft
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__feature_table commit 9023cfd83495a517fbcbb6f91d5b01a6f1afcda1
| author | q2d2 |
|---|---|
| date | Mon, 29 Aug 2022 19:57:10 +0000 |
| parents | |
| children | 0ffd4aef0c59 |
| files | qiime2__feature_table__merge_taxa.xml test-data/merge.test0.feature-table1.qza test-data/merge.test0.feature-table2.qza test-data/merge.test1.feature-table1.qza test-data/merge.test1.feature-table2.qza test-data/merge.test1.feature-table3.qza |
| diffstat | 6 files changed, 57 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/qiime2__feature_table__merge_taxa.xml Mon Aug 29 19:57:10 2022 +0000 @@ -0,0 +1,57 @@ +<?xml version='1.0' encoding='utf-8'?> +<!-- +Copyright (c) 2022, QIIME 2 development team. + +Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) +--> +<!-- +This tool was automatically generated by: + q2galaxy (version: 2022.8.1) +for: + qiime2 (version: 2022.8.1) +--> +<tool name="qiime2 feature-table merge-taxa" id="qiime2__feature_table__merge_taxa" version="2022.8.0+q2galaxy.2022.8.1.2" profile="22.05" license="BSD-3-Clause"> + <description>Combine collections of feature taxonomies</description> + <requirements> + <container type="docker">quay.io/qiime2/core:2022.8</container> + </requirements> + <version_command>q2galaxy version feature_table</version_command> + <command detect_errors="aggressive">q2galaxy run feature_table merge_taxa '$inputs'</command> + <configfiles> + <inputs name="inputs" data_style="paths"/> + </configfiles> + <inputs> + <param name="data" type="data" format="qza" label="data: List[FeatureData[Taxonomy]]" help="[required] The collection of feature taxonomies to be merged." multiple="true"> + <options options_filter_attribute="metadata.semantic_type"> + <filter type="add_value" value="FeatureData[Taxonomy]"/> + </options> + </param> + </inputs> + <outputs> + <data name="merged_data" format="qza" label="${tool.name} on ${on_string}: merged_data.qza" from_work_dir="merged_data.qza"/> + </outputs> + <tests/> + <help> +QIIME 2: feature-table merge-taxa +================================= +Combine collections of feature taxonomies + + +Outputs: +-------- +:merged_data.qza: The resulting collection of feature taxonomies containing all feature taxonomies provided. + +| + +Description: +------------ +Combines a pair of feature data objects which may or may not contain data for the same features. If different feature data is present for the same feature id in the inputs, the data from the first will be propagated to the result. + + +| + +</help> + <citations> + <citation type="doi">10.1038/s41587-019-0209-9</citation> + </citations> +</tool>