Mercurial > repos > q2d2 > qiime2__sample_classifier__predict_classification

changeset 5:555cb8da4688 draft default tip

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planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__sample_classifier commit 5f71b597c9495eae67a447744fded834f56ca1f7
author q2d2
date Wed, 30 Oct 2024 19:56:23 +0000
parents 4b8696ef6dbe
children
files qiime2__sample_classifier__predict_classification.xml
diffstat 1 files changed, 8 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/qiime2__sample_classifier__predict_classification.xml	Mon Jun 03 23:31:51 2024 +0000
+++ b/qiime2__sample_classifier__predict_classification.xml	Wed Oct 30 19:56:23 2024 +0000
@@ -6,14 +6,17 @@
 -->
 <!--
 This tool was automatically generated by:
-    q2galaxy (version: 2024.5.0)
+    q2galaxy (version: 2024.10.0)
 for:
-    qiime2 (version: 2024.5.0)
+    qiime2 (version: 2024.10.1)
 -->
-<tool name="qiime2 sample-classifier predict-classification" id="qiime2__sample_classifier__predict_classification" version="2024.5.0+q2galaxy.2024.5.0" profile="22.05" license="BSD-3-Clause">
+<tool name="qiime2 sample-classifier predict-classification" id="qiime2__sample_classifier__predict_classification" version="2024.10.0+q2galaxy.2024.10.0" profile="22.05" license="BSD-3-Clause">
     <description>Use trained classifier to predict target values for new samples.</description>
+    <xrefs>
+        <xref type="bio.tools">qiime2</xref>
+    </xrefs>
     <requirements>
-        <container type="docker">quay.io/qiime2/amplicon:2024.5</container>
+        <container type="docker">quay.io/qiime2/amplicon:2024.10</container>
     </requirements>
     <version_command>q2galaxy version sample_classifier</version_command>
     <command detect_errors="exit_code">q2galaxy run sample_classifier predict_classification '$inputs'</command>
@@ -23,9 +26,9 @@
     <inputs>
         <param name="table" type="data" format="qza" label="table: FeatureTable[Frequency | RelativeFrequency | PresenceAbsence | Composition]" help="[required]  Feature table containing all features that should be used for target prediction.">
             <options options_filter_attribute="metadata.semantic_type">
+                <filter type="add_value" value="FeatureTable[RelativeFrequency]"/>
                 <filter type="add_value" value="FeatureTable[Frequency]"/>
                 <filter type="add_value" value="FeatureTable[PresenceAbsence]"/>
-                <filter type="add_value" value="FeatureTable[RelativeFrequency]"/>
                 <filter type="add_value" value="FeatureTable[Composition]"/>
             </options>
             <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['FeatureTable[Composition]', 'FeatureTable[Frequency]', 'FeatureTable[PresenceAbsence]', 'FeatureTable[RelativeFrequency]']</validator>