qiime2__vizard__lineplot: qiime2__vizard_

annotate qiime2vizardlineplot.xml @ 2:d18e90f69613 draft default tip

planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 9436cc47c72b58a6a3d3a5c2ee075689c2926ef0

author	q2d2
date	Tue, 15 Jul 2025 22:07:29 +0000
parents	0b666cc4e746
children

rev	line source
0 df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	1 <?xml version='1.0' encoding='utf-8'?>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	2 <!--
1 0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	3 Copyright (c) 2025, QIIME 2 development team.
0 df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	4
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	5 Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause)
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	6 -->
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	7 <!--
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	8 This tool was automatically generated by:
2 d18e90f69613 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 9436cc47c72b58a6a3d3a5c2ee075689c2926ef0 q2d2 parents: 1 diff changeset	9 q2galaxy (version: 2025.7.0)
0 df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	10 for:
2 d18e90f69613 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 9436cc47c72b58a6a3d3a5c2ee075689c2926ef0 q2d2 parents: 1 diff changeset	11 qiime2 (version: 2025.7.0)
0 df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	12 -->
2 d18e90f69613 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 9436cc47c72b58a6a3d3a5c2ee075689c2926ef0 q2d2 parents: 1 diff changeset	13 <tool name="qiime2 vizard lineplot" id="qiime2__vizard__lineplot" version="0.0.1.dev0+q2galaxy.2025.7.0" profile="22.05" license="BSD-3-Clause">
0 df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	14 <description>Lineplot</description>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	15 <xrefs>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	16 <xref type="bio.tools">qiime2</xref>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	17 </xrefs>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	18 <requirements>
2 d18e90f69613 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 9436cc47c72b58a6a3d3a5c2ee075689c2926ef0 q2d2 parents: 1 diff changeset	19 <container type="docker">quay.io/qiime2/amplicon:2025.7</container>
0 df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	20 </requirements>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	21 <version_command>q2galaxy version vizard</version_command>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	22 <command detect_errors="exit_code">q2galaxy run vizard lineplot '$inputs'</command>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	23 <configfiles>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	24 <inputs name="inputs" data_style="staging_path_and_source_path"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	25 </configfiles>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	26 <inputs>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	27 <repeat name="metadata" min="1" help="[required] Any metadata-like input with at least two numeric measures for visualizing." title="metadata: Metadata">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	28 <conditional name="__q2galaxy__GUI__conditional__metadata__">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	29 <param name="type" type="select" label="metadata: Metadata">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	30 <option value="tsv" selected="true">Metadata from TSV</option>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	31 <option value="qza">Metadata from Artifact</option>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	32 </param>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	33 <when value="tsv">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	34 <param name="source" type="data" format="tabular,qiime2.tabular" label="Metadata Source"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	35 </when>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	36 <when value="qza">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	37 <param name="source" type="data" format="qza" label="Metadata Source"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	38 </when>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	39 </conditional>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	40 </repeat>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	41 <param name="x_measure" type="text" label="x_measure: Str" help="[required] Numeric measure from the input Metadata that should be plotted on the x-axis.">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	42 <sanitizer>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	43 <valid initial="string.printable"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	44 </sanitizer>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	45 <validator type="expression" message="Please verify this parameter.">value is not None and len(value) > 0</validator>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	46 </param>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	47 <section name="__q2galaxy__GUI__section__extra_opts__" title="Click here for additional options">
1 0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	48 <conditional name="__q2galaxy__GUI__conditional__y_measure__" label="y_measure: Str">
0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	49 <param name="__q2galaxy__GUI__select__" type="select" label="y_measure: Str" help="[optional] Numeric measure from the input Metadata that should be plotted on the y-axis.">
0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	50 <option value="__q2galaxy__::control::default" selected="true">None (Use default behavior)</option>
0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	51 <option value="__q2galaxy__::control::provide">Provide a value</option>
0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	52 </param>
0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	53 <when value="__q2galaxy__::control::default">
0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	54 <param name="y_measure" type="hidden" value="__q2galaxy__::literal::None"/>
0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	55 </when>
0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	56 <when value="__q2galaxy__::control::provide">
0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	57 <param name="y_measure" type="text">
0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	58 <sanitizer>
0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	59 <valid initial="string.printable"/>
0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	60 </sanitizer>
0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	61 </param>
0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	62 </when>
0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	63 </conditional>
0 df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	64 <param name="replicate_method" type="select" label="replicate_method: Str % Choices('none', 'median', 'mean')" display="radio">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	65 <option value="none" selected="true">none</option>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	66 <option value="median">median</option>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	67 <option value="mean">mean</option>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	68 </param>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	69 <conditional name="__q2galaxy__GUI__conditional__group_by__" label="group_by: Str">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	70 <param name="__q2galaxy__GUI__select__" type="select" label="group_by: Str" help="[optional] Categorical measure from the input Metadata that should be used for grouping the lineplot.">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	71 <option value="__q2galaxy__::control::default" selected="true">None (Use default behavior)</option>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	72 <option value="__q2galaxy__::control::provide">Provide a value</option>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	73 </param>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	74 <when value="__q2galaxy__::control::default">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	75 <param name="group_by" type="hidden" value="__q2galaxy__::literal::None"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	76 </when>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	77 <when value="__q2galaxy__::control::provide">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	78 <param name="group_by" type="text">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	79 <sanitizer>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	80 <valid initial="string.printable"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	81 </sanitizer>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	82 </param>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	83 </when>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	84 </conditional>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	85 <conditional name="__q2galaxy__GUI__conditional__title__" label="title: Str">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	86 <param name="__q2galaxy__GUI__select__" type="select" label="title: Str" help="[optional] The title of the lineplot.">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	87 <option value="__q2galaxy__::control::default" selected="true">None (Use default behavior)</option>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	88 <option value="__q2galaxy__::control::provide">Provide a value</option>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	89 </param>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	90 <when value="__q2galaxy__::control::default">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	91 <param name="title" type="hidden" value="__q2galaxy__::literal::None"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	92 </when>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	93 <when value="__q2galaxy__::control::provide">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	94 <param name="title" type="text">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	95 <sanitizer>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	96 <valid initial="string.printable"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	97 </sanitizer>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	98 </param>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	99 </when>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	100 </conditional>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	101 </section>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	102 </inputs>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	103 <outputs>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	104 <data name="visualization" format="qzv" label="${tool.name} on ${on_string}: visualization.qzv" from_work_dir="visualization.qzv"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	105 </outputs>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	106 <tests>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	107 <test>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	108 <repeat name="metadata">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	109 <conditional name="__q2galaxy__GUI__conditional__metadata__">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	110 <param name="type" value="tsv"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	111 <param name="source" value="lineplot.test0.metadata.tsv" ftype="qiime2.tabular"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	112 </conditional>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	113 </repeat>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	114 <param name="x_measure" value="x"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	115 <param name="y_measure" value="y"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	116 <param name="replicate_method" value="median"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	117 <param name="group_by" value="group"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	118 <param name="title" value="Lineplot with median replicate method__comma__ grouped by `group`."/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	119 <output name="visualization" ftype="qzv"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	120 </test>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	121 <test>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	122 <repeat name="metadata">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	123 <conditional name="__q2galaxy__GUI__conditional__metadata__">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	124 <param name="type" value="tsv"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	125 <param name="source" value="lineplot.test1.metadata.tsv" ftype="qiime2.tabular"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	126 </conditional>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	127 </repeat>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	128 <param name="x_measure" value="x"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	129 <param name="y_measure" value="y"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	130 <param name="replicate_method" value="mean"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	131 <param name="group_by" value="group"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	132 <param name="title" value="Lineplot with mean replicate method__comma__ grouped by `group`."/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	133 <output name="visualization" ftype="qzv"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	134 </test>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	135 <test>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	136 <repeat name="metadata">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	137 <conditional name="__q2galaxy__GUI__conditional__metadata__">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	138 <param name="type" value="tsv"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	139 <param name="source" value="lineplot.test2.metadata.tsv" ftype="qiime2.tabular"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	140 </conditional>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	141 </repeat>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	142 <param name="x_measure" value="x"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	143 <param name="y_measure" value="y"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	144 <param name="replicate_method" value="median"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	145 <param name="title" value="Lineplot with median replicate method (no grouping)."/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	146 <output name="visualization" ftype="qzv"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	147 </test>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	148 <test>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	149 <repeat name="metadata">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	150 <conditional name="__q2galaxy__GUI__conditional__metadata__">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	151 <param name="type" value="tsv"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	152 <param name="source" value="lineplot.test3.metadata.tsv" ftype="qiime2.tabular"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	153 </conditional>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	154 </repeat>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	155 <param name="x_measure" value="x"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	156 <param name="y_measure" value="y"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	157 <param name="replicate_method" value="mean"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	158 <param name="title" value="Lineplot with mean replicate method (no grouping)."/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	159 <output name="visualization" ftype="qzv"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	160 </test>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	161 <test>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	162 <repeat name="metadata">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	163 <conditional name="__q2galaxy__GUI__conditional__metadata__">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	164 <param name="type" value="tsv"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	165 <param name="source" value="lineplot.test4.metadata.tsv" ftype="qiime2.tabular"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	166 </conditional>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	167 </repeat>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	168 <param name="x_measure" value="a"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	169 <param name="y_measure" value="y"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	170 <param name="group_by" value="group"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	171 <param name="title" value="Lineplot with no replicate method__comma__ grouped by `group`."/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	172 <output name="visualization" ftype="qzv"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	173 </test>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	174 <test>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	175 <repeat name="metadata">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	176 <conditional name="__q2galaxy__GUI__conditional__metadata__">
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	177 <param name="type" value="tsv"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	178 <param name="source" value="lineplot.test5.metadata.tsv" ftype="qiime2.tabular"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	179 </conditional>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	180 </repeat>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	181 <param name="x_measure" value="b"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	182 <param name="y_measure" value="y"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	183 <param name="title" value="Lineplot with no replicate method (no grouping)."/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	184 <output name="visualization" ftype="qzv"/>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	185 </test>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	186 </tests>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	187 <help>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	188 QIIME 2: vizard lineplot
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	189 ========================
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	190 Lineplot
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	191
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	192
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	193 Outputs:
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	194 --------
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	195 :visualization.qzv: <no description>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	196
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	197 \|
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	198
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	199 Description:
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	200 ------------
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	201 Basic lineplot for visualizing two numeric Metadata measures with optional grouping. All numeric columns present in the Metadata will be available as drop-down options on the Y-axis, but the chosen `x_measure` remains fixed.
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	202
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	203 Examples:
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	204 ---------
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	205
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	206 lineplot_median_replicates_with_grouping
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	207 ****************************************
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	208 Using the ``qiime2 vizard lineplot`` tool:
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	209 #. For "metadata":
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	210
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	211 - Perform the following steps.
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	212
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	213 #. Leave as ``Metadata from TSV``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	214 #. Set "Metadata Source" to ``metadata.tsv``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	215
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	216
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	217 #. Set "x_measure" to ``x``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	218 #. Expand the ``additional options`` section
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	219
1 0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	220 #. Set "y_measure" to ``y``
0 df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	221 #. Set "replicate_method" to ``median``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	222 #. Set "group_by" to ``group``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	223 #. Set "title" to ``Lineplot with median replicate method, grouped by `group`.``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	224
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	225 #. Press the ``Execute`` button.
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	226
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	227 Once completed, for the new entry in your history, use the ``Edit`` button to set the name as follows:
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	228 (Renaming is optional, but it will make any subsequent steps easier to complete.)
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	229
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	230 .. list-table::
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	231 :align: left
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	232 :header-rows: 1
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	233
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	234 * - History Name
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	235 - "Name" to set (be sure to press ``Save``)
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	236 * - ``#: qiime2 vizard lineplot [...] : visualization.qzv``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	237 - ``lineplot.qzv``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	238
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	239 lineplot_mean_replicates_with_grouping
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	240 **************************************
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	241 Using the ``qiime2 vizard lineplot`` tool:
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	242 #. For "metadata":
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	243
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	244 - Perform the following steps.
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	245
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	246 #. Leave as ``Metadata from TSV``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	247 #. Set "Metadata Source" to ``metadata.tsv``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	248
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	249
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	250 #. Set "x_measure" to ``x``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	251 #. Expand the ``additional options`` section
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	252
1 0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	253 #. Set "y_measure" to ``y``
0 df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	254 #. Set "replicate_method" to ``mean``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	255 #. Set "group_by" to ``group``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	256 #. Set "title" to ``Lineplot with mean replicate method, grouped by `group`.``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	257
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	258 #. Press the ``Execute`` button.
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	259
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	260 Once completed, for the new entry in your history, use the ``Edit`` button to set the name as follows:
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	261 (Renaming is optional, but it will make any subsequent steps easier to complete.)
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	262
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	263 .. list-table::
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	264 :align: left
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	265 :header-rows: 1
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	266
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	267 * - History Name
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	268 - "Name" to set (be sure to press ``Save``)
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	269 * - ``#: qiime2 vizard lineplot [...] : visualization.qzv``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	270 - ``lineplot.qzv``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	271
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	272 lineplot_median_replicates_no_grouping
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	273 **************************************
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	274 Using the ``qiime2 vizard lineplot`` tool:
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	275 #. For "metadata":
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	276
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	277 - Perform the following steps.
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	278
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	279 #. Leave as ``Metadata from TSV``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	280 #. Set "Metadata Source" to ``metadata.tsv``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	281
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	282
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	283 #. Set "x_measure" to ``x``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	284 #. Expand the ``additional options`` section
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	285
1 0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	286 #. Set "y_measure" to ``y``
0 df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	287 #. Set "replicate_method" to ``median``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	288 #. Set "title" to ``Lineplot with median replicate method (no grouping).``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	289
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	290 #. Press the ``Execute`` button.
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	291
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	292 Once completed, for the new entry in your history, use the ``Edit`` button to set the name as follows:
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	293 (Renaming is optional, but it will make any subsequent steps easier to complete.)
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	294
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	295 .. list-table::
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	296 :align: left
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	297 :header-rows: 1
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	298
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	299 * - History Name
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	300 - "Name" to set (be sure to press ``Save``)
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	301 * - ``#: qiime2 vizard lineplot [...] : visualization.qzv``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	302 - ``lineplot.qzv``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	303
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	304 lineplot_mean_replicates_no_grouping
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	305 ************************************
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	306 Using the ``qiime2 vizard lineplot`` tool:
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	307 #. For "metadata":
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	308
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	309 - Perform the following steps.
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	310
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	311 #. Leave as ``Metadata from TSV``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	312 #. Set "Metadata Source" to ``metadata.tsv``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	313
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	314
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	315 #. Set "x_measure" to ``x``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	316 #. Expand the ``additional options`` section
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	317
1 0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	318 #. Set "y_measure" to ``y``
0 df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	319 #. Set "replicate_method" to ``mean``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	320 #. Set "title" to ``Lineplot with mean replicate method (no grouping).``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	321
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	322 #. Press the ``Execute`` button.
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	323
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	324 Once completed, for the new entry in your history, use the ``Edit`` button to set the name as follows:
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	325 (Renaming is optional, but it will make any subsequent steps easier to complete.)
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	326
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	327 .. list-table::
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	328 :align: left
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	329 :header-rows: 1
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	330
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	331 * - History Name
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	332 - "Name" to set (be sure to press ``Save``)
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	333 * - ``#: qiime2 vizard lineplot [...] : visualization.qzv``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	334 - ``lineplot.qzv``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	335
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	336 lineplot_no_replicates_with_grouping
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	337 ************************************
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	338 Using the ``qiime2 vizard lineplot`` tool:
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	339 #. For "metadata":
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	340
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	341 - Perform the following steps.
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	342
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	343 #. Leave as ``Metadata from TSV``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	344 #. Set "Metadata Source" to ``metadata.tsv``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	345
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	346
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	347 #. Set "x_measure" to ``a``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	348 #. Expand the ``additional options`` section
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	349
1 0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	350 #. Set "y_measure" to ``y``
0 df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	351 #. Set "group_by" to ``group``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	352 #. Set "title" to ``Lineplot with no replicate method, grouped by `group`.``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	353
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	354 #. Press the ``Execute`` button.
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	355
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	356 Once completed, for the new entry in your history, use the ``Edit`` button to set the name as follows:
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	357 (Renaming is optional, but it will make any subsequent steps easier to complete.)
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	358
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	359 .. list-table::
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	360 :align: left
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	361 :header-rows: 1
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	362
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	363 * - History Name
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	364 - "Name" to set (be sure to press ``Save``)
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	365 * - ``#: qiime2 vizard lineplot [...] : visualization.qzv``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	366 - ``lineplot.qzv``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	367
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	368 lineplot_no_replicates_no_grouping
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	369 **********************************
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	370 Using the ``qiime2 vizard lineplot`` tool:
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	371 #. For "metadata":
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	372
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	373 - Perform the following steps.
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	374
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	375 #. Leave as ``Metadata from TSV``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	376 #. Set "Metadata Source" to ``metadata.tsv``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	377
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	378
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	379 #. Set "x_measure" to ``b``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	380 #. Expand the ``additional options`` section
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	381
1 0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	382 #. Set "y_measure" to ``y``
0b666cc4e746 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit b1fccfb38b4873cd4699743033449014a2978e7d q2d2 parents: 0 diff changeset	383 #. Set "title" to ``Lineplot with no replicate method (no grouping).``
0 df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	384
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	385 #. Press the ``Execute`` button.
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	386
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	387 Once completed, for the new entry in your history, use the ``Edit`` button to set the name as follows:
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	388 (Renaming is optional, but it will make any subsequent steps easier to complete.)
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	389
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	390 .. list-table::
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	391 :align: left
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	392 :header-rows: 1
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	393
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	394 * - History Name
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	395 - "Name" to set (be sure to press ``Save``)
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	396 * - ``#: qiime2 vizard lineplot [...] : visualization.qzv``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	397 - ``lineplot.qzv``
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	398
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	399
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	400 \|
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	401
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	402 </help>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	403 <citations>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	404 <citation type="doi">10.1038/s41587-019-0209-9</citation>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	405 </citations>
df9f1ff48c29 planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__vizard commit 5f71b597c9495eae67a447744fded834f56ca1f7 q2d2 parents: diff changeset	406 </tool>

Mercurial > repos > q2d2 > qiime2__vizard__lineplot

annotate qiime2__vizard__lineplot.xml @ 2:d18e90f69613 draft default tip

Mercurial > repos > q2d2 > qiime2vizardlineplot

annotate qiime2vizardlineplot.xml @ 2:d18e90f69613 draft default tip